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Posted to issues@airavata.apache.org by "Marcus Christie (JIRA)" <ji...@apache.org> on 2017/05/12 20:50:04 UTC

[jira] [Created] (AIRAVATA-2383) LSF walltime calculation

Marcus Christie created AIRAVATA-2383:
-----------------------------------------

             Summary: LSF walltime calculation
                 Key: AIRAVATA-2383
                 URL: https://issues.apache.org/jira/browse/AIRAVATA-2383
             Project: Airavata
          Issue Type: Bug
            Reporter: Marcus Christie
            Assignee: Marcus Christie


LSF script walltime format is wrong. Here's an example script created:

{noformat}
#!/bin/bash
# LSF batch job submission script generated by Apache Airavata

#BSUB -L /bin/bash
#BSUB -q short
#BSUB -n 1
#BSUB -J A1460597667
#BSUB -u gw56jobs@scigap.org
#BSUB -W 00:30:00
#BSUB -o /scratch/scigap0/PROCESS_01a85937-e308-498e-b14a-e0529135f046/Quantum_Espresso.stdout
#BSUB -e /scratch/scigap0/PROCESS_01a85937-e308-498e-b14a-e0529135f046/Quantum_Espresso.stderr

module load icc/13.0.1 openmpi/1.6.5 espresso/5.3.0
cd /scratch/scigap0/PROCESS_01a85937-e308-498e-b14a-e0529135f046
mpirun -np /opt/apps/icc-13.0.1/openmpi-1.6.5/espresso/5.3.0/bin/pw.x < Al.sample.in > Al.sample.out 
{noformat}

Walltime is the {{#BSUB -W 00:30:00}} parameter. It should be {{#BSUB -W 00:30}} because walltime in LSF is HH:MM.




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