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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2019/12/18 18:09:03 UTC
Build failed in Jenkins: beam_PostCommit_Python_MongoDBIO_IT #1588
See <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/1588/display/redirect>
Changes:
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Installing collected packages: crcmod, dill, fastavro, docopt, chardet, certifi, idna, urllib3, requests, hdfs, httplib2, pbr, mock, numpy, pymongo, pyasn1, rsa, pyasn1-modules, oauth2client, pyparsing, pydot, python-dateutil, pytz, pyarrow, avro-python3, typing, typing-extensions, nose, nose-xunitmp, pandas, parameterized, pyhamcrest, pyyaml, requests-mock, tenacity, atomicwrites, packaging, wcwidth, attrs, pathlib2, pytest, pytest-forked, apipkg, execnet, pytest-xdist, apache-beam
Running setup.py develop for apache-beam
Successfully installed apache-beam apipkg-1.5 atomicwrites-1.3.0 attrs-19.3.0 avro-python3-1.9.1 certifi-2019.11.28 chardet-3.0.4 crcmod-1.7 dill-0.3.1.1 docopt-0.6.2 execnet-1.7.1 fastavro-0.21.24 hdfs-2.5.8 httplib2-0.12.0 idna-2.8 mock-2.0.0 nose-1.3.7 nose-xunitmp-0.4.1 numpy-1.17.4 oauth2client-3.0.0 packaging-19.2 pandas-0.24.2 parameterized-0.6.3 pathlib2-2.3.5 pbr-5.4.4 pyarrow-0.15.1 pyasn1-0.4.8 pyasn1-modules-0.2.7 pydot-1.4.1 pyhamcrest-1.9.0 pymongo-3.10.0 pyparsing-2.4.5 pytest-4.6.7 pytest-forked-1.1.3 pytest-xdist-1.30.0 python-dateutil-2.8.1 pytz-2019.3 pyyaml-5.2 requests-2.22.0 requests-mock-1.7.0 rsa-4.0 tenacity-5.1.5 typing-3.7.4.1 typing-extensions-3.7.4.1 urllib3-1.25.7 wcwidth-0.1.7
Traceback (most recent call last):
File "/usr/lib/python3.5/runpy.py", line 174, in _run_module_as_main
mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
File "/usr/lib/python3.5/runpy.py", line 109, in _get_module_details
__import__(pkg_name)
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/__init__.py",> line 97, in <module>
from apache_beam import coders
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/coders/__init__.py",> line 19, in <module>
from apache_beam.coders.coders import *
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/coders/coders.py",> line 44, in <module>
from apache_beam.coders import coder_impl
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/coders/coder_impl.py",> line 59, in <module>
from apache_beam.utils import windowed_value
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/utils/windowed_value.py",> line 38, in <module>
from apache_beam.utils.timestamp import MAX_TIMESTAMP
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/utils/timestamp.py",> line 40, in <module>
from apache_beam.portability import common_urns
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/portability/common_urns.py",> line 24, in <module>
from apache_beam.portability.api import beam_runner_api_pb2
File "<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/portability/api/beam_runner_api_pb2.py",> line 16, in <module>
import endpoints_pb2 as endpoints__pb2
ImportError: No module named 'endpoints_pb2'
> Task :sdks:python:test-suites:direct:py35:mongodbioIT FAILED
> Task :sdks:python:test-suites:direct:py2:mongodbioIT
Using default tag: latest
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Status: Image is up to date for mongo:latest
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DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Obtaining file://<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python>
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Installing collected packages: crcmod, dill, fastavro, docopt, urllib3, certifi, chardet, idna, requests, hdfs, httplib2, pbr, funcsigs, mock, numpy, pymongo, pyasn1, pyasn1-modules, rsa, oauth2client, pyparsing, pydot, python-dateutil, pytz, avro, pyvcf, pyarrow, typing, typing-extensions, nose, nose-xunitmp, pandas, parameterized, pyhamcrest, pyyaml, requests-mock, monotonic, tenacity, atomicwrites, packaging, wcwidth, attrs, pytest, pytest-forked, apipkg, execnet, pytest-xdist, apache-beam
Running setup.py develop for apache-beam
Successfully installed apache-beam apipkg-1.5 atomicwrites-1.3.0 attrs-19.3.0 avro-1.9.1 certifi-2019.11.28 chardet-3.0.4 crcmod-1.7 dill-0.3.1.1 docopt-0.6.2 execnet-1.7.1 fastavro-0.21.24 funcsigs-1.0.2 hdfs-2.5.8 httplib2-0.12.0 idna-2.8 mock-2.0.0 monotonic-1.5 nose-1.3.7 nose-xunitmp-0.4.1 numpy-1.16.5 oauth2client-3.0.0 packaging-19.2 pandas-0.24.2 parameterized-0.6.3 pbr-5.4.4 pyarrow-0.15.1 pyasn1-0.4.8 pyasn1-modules-0.2.7 pydot-1.4.1 pyhamcrest-1.9.0 pymongo-3.10.0 pyparsing-2.4.5 pytest-4.6.7 pytest-forked-1.1.3 pytest-xdist-1.30.0 python-dateutil-2.8.1 pytz-2019.3 pyvcf-0.6.8 pyyaml-5.2 requests-2.22.0 requests-mock-1.7.0 rsa-4.0 tenacity-5.1.5 typing-3.7.4.1 typing-extensions-3.7.4.1 urllib3-1.25.7 wcwidth-0.1.7
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/__init__.py>:84: UserWarning: You are using Apache Beam with Python 2. New releases of Apache Beam will soon support Python 3 only.
'You are using Apache Beam with Python 2. '
INFO:root:Missing pipeline option (runner). Executing pipeline using the default runner: DirectRunner.
INFO:__main__:Writing 100000 documents to mongodb
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:79: FutureWarning: WriteToMongoDB is experimental.
known_args.batch_size))
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function annotate_downstream_side_inputs at 0x7fc472c38c80> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function fix_side_input_pcoll_coders at 0x7fc472c38d70> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function lift_combiners at 0x7fc472c38de8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_sdf at 0x7fc472c38e60> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_gbk at 0x7fc472c38ed8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sink_flattens at 0x7fc472c3a050> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function greedily_fuse at 0x7fc472c3a0c8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function read_to_impulse at 0x7fc472c3a140> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function impulse_to_input at 0x7fc472c3a1b8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function inject_timer_pcollections at 0x7fc472c3a320> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sort_stages at 0x7fc472c3a398> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function window_pcollection_coders at 0x7fc472c3a410> ====================
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 100
INFO:apache_beam.runners.portability.fn_api_runner:Created Worker handler <apache_beam.runners.portability.fn_api_runner.EmbeddedWorkerHandler object at 0x7fc477abe390> for environment urn: "beam:env:embedded_python:v1"
INFO:apache_beam.runners.portability.fn_api_runner:Running (ref_AppliedPTransform_Create/Impulse_3)+((ref_AppliedPTransform_Create/FlatMap(<lambda at core.py:2573>)_4)+((ref_AppliedPTransform_Create/Map(decode)_6)+((ref_AppliedPTransform_Create documents_7)+((ref_AppliedPTransform_WriteToMongoDB/ParDo(_GenerateObjectIdFn)_9)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/AddRandomKeys_11)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/Map(reify_timestamps)_13)+(WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Write)))))))
INFO:apache_beam.runners.portability.fn_api_runner:Running (WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Read)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/FlatMap(restore_timestamps)_18)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/RemoveRandomKeys_19)+(ref_AppliedPTransform_WriteToMongoDB/ParDo(_WriteMongoFn)_20)))
INFO:__main__:Writing 100000 documents to mongodb finished in 29.459 seconds
INFO:root:Missing pipeline option (runner). Executing pipeline using the default runner: DirectRunner.
INFO:__main__:Reading from mongodb beam_mongodbio_it_db:integration_test_1576692503
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:94: FutureWarning: ReadFromMongoDB is experimental.
| 'Combine' >> beam.CombineGlobally(sum))
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function annotate_downstream_side_inputs at 0x7fc472c38c80> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function fix_side_input_pcoll_coders at 0x7fc472c38d70> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function lift_combiners at 0x7fc472c38de8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_sdf at 0x7fc472c38e60> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_gbk at 0x7fc472c38ed8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sink_flattens at 0x7fc472c3a050> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function greedily_fuse at 0x7fc472c3a0c8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function read_to_impulse at 0x7fc472c3a140> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function impulse_to_input at 0x7fc472c3a1b8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function inject_timer_pcollections at 0x7fc472c3a320> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sort_stages at 0x7fc472c3a398> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function window_pcollection_coders at 0x7fc472c3a410> ====================
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 100
INFO:apache_beam.runners.portability.fn_api_runner:Created Worker handler <apache_beam.runners.portability.fn_api_runner.EmbeddedWorkerHandler object at 0x7fc473a20c50> for environment urn: "beam:env:embedded_python:v1"
INFO:apache_beam.runners.portability.fn_api_runner:Running ((ref_AppliedPTransform_ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/Impulse_5)+(ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/PairWithRestriction))+((ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/SplitAndSizeRestriction)+(ref_PCollection_PCollection_1_split/Write))
INFO:apache_beam.runners.portability.fn_api_runner:Running (ref_PCollection_PCollection_1_split/Read)+(((ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/Process)+((ref_AppliedPTransform_Map_7)+((ref_AppliedPTransform_Combine/KeyWithVoid_9)+(Combine/CombinePerKey/Precombine))))+(Combine/CombinePerKey/Group/Write))
INFO:apache_beam.runners.portability.fn_api_runner:Running ((Combine/CombinePerKey/Group/Read)+(Combine/CombinePerKey/Merge))+((Combine/CombinePerKey/ExtractOutputs)+((ref_AppliedPTransform_Combine/UnKey_17)+(ref_PCollection_PCollection_9/Write)))
INFO:apache_beam.runners.portability.fn_api_runner:Running ((ref_AppliedPTransform_Combine/DoOnce/Impulse_19)+((ref_AppliedPTransform_Combine/DoOnce/FlatMap(<lambda at core.py:2573>)_20)+((ref_AppliedPTransform_Combine/DoOnce/Map(decode)_22)+((ref_AppliedPTransform_Combine/InjectDefault_23)+((ref_AppliedPTransform_assert_that/WindowInto(WindowIntoFn)_30)+((ref_AppliedPTransform_assert_that/ToVoidKey_31)+(ref_AppliedPTransform_assert_that/Group/pair_with_1_34)))))))+((assert_that/Group/Flatten/Transcode/1)+(assert_that/Group/Flatten/Write/1))
INFO:apache_beam.runners.portability.fn_api_runner:Running (ref_AppliedPTransform_assert_that/Create/Impulse_26)+((ref_AppliedPTransform_assert_that/Create/FlatMap(<lambda at core.py:2573>)_27)+((ref_AppliedPTransform_assert_that/Create/Map(decode)_29)+((ref_AppliedPTransform_assert_that/Group/pair_with_0_33)+((assert_that/Group/Flatten/Transcode/0)+(assert_that/Group/Flatten/Write/0)))))
INFO:apache_beam.runners.portability.fn_api_runner:Running (assert_that/Group/Flatten/Read)+(assert_that/Group/GroupByKey/Write)
INFO:apache_beam.runners.portability.fn_api_runner:Running ((assert_that/Group/GroupByKey/Read)+(ref_AppliedPTransform_assert_that/Group/Map(_merge_tagged_vals_under_key)_40))+((ref_AppliedPTransform_assert_that/Unkey_41)+(ref_AppliedPTransform_assert_that/Match_42))
INFO:__main__:Read 100000 documents from mongodb finished in 4.509 seconds
mongoioit27526
mongoioit27526
FAILURE: Build failed with an exception.
* Where:
Build file '<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/test-suites/direct/py35/build.gradle'> line: 78
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py35:mongodbioIT'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 1m 43s
4 actionable tasks: 4 executed
Publishing build scan...
https://gradle.com/s/hpggms4e23d5o
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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