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Posted to commits@airavata.apache.org by ma...@apache.org on 2019/06/02 17:23:00 UTC
[airavata-php-gateway] 13/14: Update dREG page
This is an automated email from the ASF dual-hosted git repository.
machristie pushed a commit to branch dreg-gateway
in repository https://gitbox.apache.org/repos/asf/airavata-php-gateway.git
commit 7768b4a03c8517d4e52241c7efca0cb2c07577d7
Author: root <ro...@dreg-gateway-instance1.jetstreamlocal>
AuthorDate: Sat Feb 9 20:59:41 2019 +0000
Update dREG page
---
public/themes/dreg/partials/doc.blade.php | 7 ++++---
public/themes/dreg/partials/template.blade.php | 8 +++++---
2 files changed, 9 insertions(+), 6 deletions(-)
diff --git a/public/themes/dreg/partials/doc.blade.php b/public/themes/dreg/partials/doc.blade.php
index dd70744..9b5d2be 100755
--- a/public/themes/dreg/partials/doc.blade.php
+++ b/public/themes/dreg/partials/doc.blade.php
@@ -327,10 +327,11 @@ Secondly, when you click the genome browser link, please use the Left-Click, don
<p><b>Q: How to I cite the dREG gateway?</b></p>
<p>A: Please cite one of our papers if you use dREG results in your publication:<BR/>
+<p>A: Please cite one of our papers if you use dREG results in your publication:<BR/>
+<A target="_blank" href="https://genome.cshlp.org/content/29/2/293.short">
+(1) Wang, Z., Chu, T., Choate, L. A., & Danko, C. G. (2019). Identification of regulatory elements from nascent transcription using dREG. Genome research, 29(2), 293-303. </A></P>
<A target="_blank" href="http://www.nature.com/nmeth/journal/v12/n5/full/nmeth.3329.html">
-(1) Danko, C. G., Hyland, S. L., Core, L. J., Martins, A. L., Waters, C. T., Lee, H. W., ... & Siepel, A. (2015). Identification of active transcriptional regulatory elements from GRO-seq data. Nature methods, 12(5), 433-438. </A></p>
-<A target="_blank" href="https://www.biorxiv.org/content/early/2018/05/14/321539.abstract">
-(2) Wang, Z., Chu, T., Choate, L. A., & Danko, C. G. (2018). Identification of regulatory elements from nascent transcription using dREG. bioRxiv, 321539. </A></P>
+(2) Danko, C. G., Hyland, S. L., Core, L. J., Martins, A. L., Waters, C. T., Lee, H. W., ... & Siepel, A. (2015). Identification of active transcriptional regulatory elements from GRO-seq data. Nature methods, 12(5), 433-438. </A></p>
<p><b>Q: Do I have to create account before using this service?</b></p>
diff --git a/public/themes/dreg/partials/template.blade.php b/public/themes/dreg/partials/template.blade.php
index 1325121..ccae7dc 100755
--- a/public/themes/dreg/partials/template.blade.php
+++ b/public/themes/dreg/partials/template.blade.php
@@ -143,11 +143,13 @@ Currently, this gateway hosts two bioinformatics services for functional analysi
<h1 class="text-center">Publications</h1>
<div style="width: 92%; margin-left: 5%; padding-left:15px">
<table>
+
<tr>
<td width="50px"><img id="myImg2" alt="dREG model" src="{{ URL::to('/') }}/themes/{{Session::get('theme')}}/assets/img/n1.png" style="width:100%"></img></td>
<td>
<p class="text-left" style="margin-left: 5px; margin-top:10px;">
-Danko, C. G., Hyland, S. L., Core, L. J., Martins, A. L., Waters, C. T., Lee, H. W., ... & Siepel, A. (2015). <A target=_blank href="http://www.nature.com/nmeth/journal/v12/n5/full/nmeth.3329.html">Identification of active transcriptional regulatory elements from GRO-seq data.</A> Nature methods, 12(5), 433-438.</p>
+Wang, Z., Chu, T., Choate, L. A., & Danko, C. G. (2019). <A target=_blank href="https://genome.cshlp.org/content/29/2/293.short">Identification of regulatory elements from nascent transcription using dREG.</A> Genome research, 29(2), 293-303.
+</p>
</td>
</tr>
@@ -155,12 +157,12 @@ Danko, C. G., Hyland, S. L., Core, L. J., Martins, A. L., Waters, C. T., Lee, H.
<td width="50px"><img id="myImg2" alt="dREG model" src="{{ URL::to('/') }}/themes/{{Session::get('theme')}}/assets/img/n2.png" style="width:100%"></img></td>
<td>
<p class="text-left" style="margin-left: 5px; margin-top:10px;">
-Wang, Z., Chu, T., Choate, L. A., & Danko, C. G. (2018). <A target=_blank href="https://www.biorxiv.org/content/early/2018/05/14/321539.abstract">Identification of regulatory elements from nascent transcription using dREG.</A> bioRxiv, 321539.
-</p>
+Danko, C. G., Hyland, S. L., Core, L. J., Martins, A. L., Waters, C. T., Lee, H. W., ... & Siepel, A. (2015). <A target=_blank href="http://www.nature.com/nmeth/journal/v12/n5/full/nmeth.3329.html">Identification of active transcriptional regulatory elements from GRO-seq data.</A> Nature methods, 12(5), 433-438.</p>
</td>
</tr>
+
</table>
</div>