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Posted to commits@marmotta.apache.org by an...@apache.org on 2013/10/01 01:47:59 UTC

[07/51] [partial] Revert "Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/incubator-marmotta"

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/ConfigurationServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/ConfigurationServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/ConfigurationServiceImpl.java
index 9642b78..02cdd81 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/ConfigurationServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/ConfigurationServiceImpl.java
@@ -49,7 +49,6 @@ import org.apache.commons.configuration.Configuration;
 import org.apache.commons.configuration.ConfigurationException;
 import org.apache.commons.configuration.MapConfiguration;
 import org.apache.commons.configuration.PropertiesConfiguration;
-import org.apache.commons.lang3.ObjectUtils;
 import org.apache.marmotta.platform.core.api.config.ConfigurationService;
 import org.apache.marmotta.platform.core.events.ConfigurationChangedEvent;
 import org.apache.marmotta.platform.core.events.ConfigurationServiceInitEvent;
@@ -79,7 +78,7 @@ import com.google.common.io.Resources;
 @ApplicationScoped
 public class ConfigurationServiceImpl implements ConfigurationService {
 
-	private String home;
+    private String home;
 
     private static Logger log = LoggerFactory.getLogger(ConfigurationService.class);
 
@@ -181,23 +180,16 @@ public class ConfigurationServiceImpl implements ConfigurationService {
                     f1.mkdirs();
                 }
                 // ensure directory for user configuration files
-                File f2 = new File(getHome() + File.separator + DIR_CONFIG);
+                File f2 = new File(getHome() + File.separator + "config");
                 if(!f2.exists()) {
                     f2.mkdirs();
                 }
 
                 // ensure directory for logging messages
-                File f3 = new File(getHome() + File.separator + DIR_LOG);
+                File f3 = new File(getHome() + File.separator + "log");
                 if(!f3.exists()) {
                     f3.mkdirs();
                 }
-                
-                // ensure directory for importing data
-                File f4 = new File(getHome() + File.separator + DIR_IMPORT);
-                if(!f4.exists()) {
-                    f4.mkdirs();
-                }
-                
             }
 
             // the save configuration will be in the  home directory
@@ -315,30 +307,14 @@ public class ConfigurationServiceImpl implements ConfigurationService {
             log.info("Apache Marmotta Configuration Service: initialisation completed");
 
             configurationInitEvent.fire(new ConfigurationServiceInitEvent());
-            
+
+            initialising = false;
         } finally {
             lock.writeLock().unlock();
         }
 
     }
 
-    @Override
-    public boolean isInitialising() {
-        return initialising;
-    }
-
-    /**
-     * Signal that initialisation of the system has completed and configuration events are now enabled.
-     *
-     * @param initialising
-     */
-    @Override
-    public void setInitialising(boolean initialising) {
-        this.initialising = initialising;
-
-        log.info("Initialisation completed, enabling configuration events");
-    }
-
     /**
      * Initialise the Apache Marmotta Logging Configuration.
      * <ul>
@@ -594,18 +570,16 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getProperty(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -729,18 +703,16 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getDouble(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -780,18 +752,16 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getInt(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -847,18 +817,16 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getLong(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -900,20 +868,17 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || value != config.getBoolean(key)) {
-
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -996,19 +961,17 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getList(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, value);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, value);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -1033,26 +996,23 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(value,config.getString(key))) {
-
-            lock.writeLock().lock();
-            try {
-                if (config instanceof AbstractConfiguration) {
-                    ((AbstractConfiguration) config).setDelimiterParsingDisabled(true);
-                }
-                config.setProperty(key, value);
-                if (config instanceof AbstractConfiguration) {
-                    ((AbstractConfiguration) config).setDelimiterParsingDisabled(false);
-                }
-                save();
-            } finally {
-                lock.writeLock().unlock();
+        lock.writeLock().lock();
+        try {
+            if (config instanceof AbstractConfiguration) {
+                ((AbstractConfiguration) config).setDelimiterParsingDisabled(true);
             }
+            config.setProperty(key, value);
+            if (config instanceof AbstractConfiguration) {
+                ((AbstractConfiguration) config).setDelimiterParsingDisabled(false);
+            }
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 
@@ -1117,19 +1077,17 @@ public class ConfigurationServiceImpl implements ConfigurationService {
         Preconditions.checkNotNull(key);
         Preconditions.checkState(initialised,"ConfigurationService not yet initialised; call initialise() manually");
 
-        if(!config.containsKey(key) || !ObjectUtils.equals(values,config.getList(key))) {
-            lock.writeLock().lock();
-            try {
-                config.setProperty(key, values);
-                save();
-            } finally {
-                lock.writeLock().unlock();
-            }
+        lock.writeLock().lock();
+        try {
+            config.setProperty(key, values);
+            save();
+        } finally {
+            lock.writeLock().unlock();
+        }
 
 
-            if (!initialising) {
-                configurationEvent.fire(new ConfigurationChangedEvent(key));
-            }
+        if (!initialising) {
+            configurationEvent.fire(new ConfigurationChangedEvent(key));
         }
     }
 

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/DependenciesServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/DependenciesServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/DependenciesServiceImpl.java
index d004676..3a0cf94 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/DependenciesServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/config/DependenciesServiceImpl.java
@@ -18,7 +18,7 @@
 package org.apache.marmotta.platform.core.services.config;
 
 import org.apache.marmotta.platform.core.api.config.DependenciesService;
-import org.apache.commons.lang3.StringUtils;
+import org.apache.commons.lang.StringUtils;
 import org.slf4j.Logger;
 
 import javax.annotation.PostConstruct;

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentReader.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentReader.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentReader.java
index 3c2510e..d793a1a 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentReader.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentReader.java
@@ -134,7 +134,6 @@ public class FileSystemContentReader implements ContentReader {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();
@@ -188,7 +187,6 @@ public class FileSystemContentReader implements ContentReader {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();
@@ -231,7 +229,6 @@ public class FileSystemContentReader implements ContentReader {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();
@@ -288,7 +285,6 @@ public class FileSystemContentReader implements ContentReader {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentWriter.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentWriter.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentWriter.java
index d26f2cc..62935f8 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentWriter.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/content/FileSystemContentWriter.java
@@ -93,7 +93,6 @@ public class FileSystemContentWriter implements ContentWriter {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();
@@ -165,7 +164,6 @@ public class FileSystemContentWriter implements ContentWriter {
         try {
             RepositoryConnection conn = sesameService.getConnection();
             try {
-                conn.begin();
                 MediaContentItem mci = FacadingFactory.createFacading(conn).createFacade(resource, MediaContentItem.class);
 
                 String path = mci.getContentPath();

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportServiceImpl.java
index 2c95d3b..5d088ce 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportServiceImpl.java
@@ -17,7 +17,6 @@
  */
 package org.apache.marmotta.platform.core.services.importer;
 
-import org.apache.commons.lang3.StringUtils;
 import org.apache.marmotta.platform.core.api.importer.ImportService;
 import org.apache.marmotta.platform.core.api.importer.Importer;
 import org.apache.marmotta.platform.core.exception.io.MarmottaImportException;
@@ -29,7 +28,6 @@ import javax.enterprise.context.ApplicationScoped;
 import javax.enterprise.inject.Any;
 import javax.enterprise.inject.Instance;
 import javax.inject.Inject;
-
 import java.io.InputStream;
 import java.io.Reader;
 import java.net.URL;
@@ -73,39 +71,21 @@ public class ImportServiceImpl implements ImportService{
 
 	@Override
 	public int importData(URL url, String format, Resource user, URI context) throws MarmottaImportException {
-        long start = System.currentTimeMillis();
-		int result = getImporterInstance(format).importData(url,format,user,context);
-        long end = System.currentTimeMillis();
-        log.info("data import finished ({} ms}", end-start);
-        return result;
+		return getImporterInstance(format).importData(url,format,user,context);
 	}
 
 	@Override
 	public int importData(InputStream is, String format, Resource user, URI context) throws MarmottaImportException {
-        long start = System.currentTimeMillis();
-        int result = getImporterInstance(format).importData(is,format,user,context);
-        long end = System.currentTimeMillis();
-        log.info("data import finished ({} ms}", end-start);
-        return result;
+		return getImporterInstance(format).importData(is,format,user,context);
 	}
 
 	@Override
 	public int importData(Reader reader, String format, Resource user, URI context) throws MarmottaImportException {
-        long start = System.currentTimeMillis();
-        int result = getImporterInstance(format).importData(reader,format,user,context);
-        long end = System.currentTimeMillis();
-        log.info("data import finished ({} ms}", end-start);
-        return result;
+		return getImporterInstance(format).importData(reader,format,user,context);
 	}
 
 	private Importer getImporterInstance(String type) throws MarmottaImportException {
-		if (StringUtils.contains(type, ';')) { 
-			type = type.split(";")[0];
-		}
-		if(!importerMap.containsKey(type)) { 
-			throw new MarmottaImportException("no importer defined for type " + type);
-		}
+		if(!importerMap.containsKey(type)) throw new MarmottaImportException("no importer defined for type "+type);
 		return importerMap.get(type);
 	}
-	
 }
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportWatchServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportWatchServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportWatchServiceImpl.java
deleted file mode 100644
index 06e9106..0000000
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/ImportWatchServiceImpl.java
+++ /dev/null
@@ -1,265 +0,0 @@
-/**
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-package org.apache.marmotta.platform.core.services.importer;
-
-import java.io.BufferedInputStream;
-import java.io.File;
-import java.io.FileInputStream;
-import java.io.IOException;
-import java.io.UnsupportedEncodingException;
-import java.net.URLDecoder;
-import java.nio.file.Files;
-import java.nio.file.Path;
-import java.nio.file.Paths;
-import java.nio.file.StandardWatchEventKinds;
-import java.nio.file.WatchEvent;
-import java.nio.file.WatchEvent.Kind;
-import java.nio.file.WatchKey;
-import java.nio.file.WatchService;
-import java.util.Date;
-import java.util.HashMap;
-import java.util.Map;
-
-import javax.enterprise.context.ApplicationScoped;
-import javax.enterprise.event.Observes;
-import javax.inject.Inject;
-
-import org.apache.commons.lang3.StringUtils;
-import org.apache.marmotta.platform.core.api.config.ConfigurationService;
-import org.apache.marmotta.platform.core.api.importer.ImportService;
-import org.apache.marmotta.platform.core.api.importer.ImportWatchService;
-import org.apache.marmotta.platform.core.api.task.Task;
-import org.apache.marmotta.platform.core.api.task.TaskManagerService;
-import org.apache.marmotta.platform.core.api.triplestore.ContextService;
-import org.apache.marmotta.platform.core.api.user.UserService;
-import org.apache.marmotta.platform.core.events.SystemStartupEvent;
-import org.apache.marmotta.platform.core.exception.io.MarmottaImportException;
-import org.openrdf.model.URI;
-import org.openrdf.rio.RDFFormat;
-import org.openrdf.rio.Rio;
-import org.slf4j.Logger;
-
-import com.ibm.icu.text.CharsetDetector;
-import com.ibm.icu.text.CharsetMatch;
-
-/**
- * Implementation for watching import directory
- * 
- * @author Sergio Fernández
- * 
- */
-@ApplicationScoped
-public class ImportWatchServiceImpl implements ImportWatchService {
-
-	private static final String TASK_GROUP = "Import Watch";
-
-	private static final String TASK_DETAIL_PATH = "path";
-	
-	private static final String TASK_DETAIL_CONTEXT = "context";
-	
-	@Inject
-	private Logger log;
-
-	@Inject
-	private TaskManagerService taskManagerService;
-
-	@Inject
-	private ConfigurationService configurationService;
-
-	@Inject
-	private ImportService importService;
-
-	@Inject
-	private ContextService contextService;
-
-	@Inject
-	private UserService userService;
-	
-	private Map<WatchKey,Path> keys;
-
-	private String path;
-
-	private int count;
-
-	public ImportWatchServiceImpl() {
-		this.keys = new HashMap<WatchKey,Path>();
-		count = 0;
-	}
-
-	@Override
-	public void initialize(@Observes SystemStartupEvent event) {
-		this.path = configurationService.getHome() + File.separator + ConfigurationService.DIR_IMPORT;
-
-		Runnable r = new Runnable() {
-
-			@Override
-			public void run() {
-				final Task task = taskManagerService.createTask("Directory import watch", TASK_GROUP);
-				task.updateMessage("watching...");
-				task.updateDetailMessage(TASK_DETAIL_PATH, path);
-
-				try {
-					Path root = Paths.get(path);
-					WatchService watcher = root.getFileSystem().newWatchService();
-					register(root, watcher, StandardWatchEventKinds.ENTRY_CREATE, StandardWatchEventKinds.ENTRY_DELETE);
-					while (true) {
-						final WatchKey key = watcher.take();
-						for (WatchEvent<?> event : key.pollEvents()) {
-							
-							@SuppressWarnings("unchecked")
-							Path item = ((WatchEvent<Path>) event).context();
-							Path dir = keys.get(key);
-							File file = new File(dir.toString(), item.toString()).getAbsoluteFile();
-							
-							if (StandardWatchEventKinds.ENTRY_CREATE.equals(event.kind())) {
-								if (file.isDirectory()) {
-									//recursive registration of sub-directories
-									register(Paths.get(dir.toString(), item.toString()), watcher, StandardWatchEventKinds.ENTRY_CREATE, StandardWatchEventKinds.ENTRY_DELETE);
-									task.updateProgress(++count);
-								} else {
-									URI context = getTargetContext(file);
-									log.debug("Importing '{}'...", file.getAbsolutePath());
-									task.updateMessage("importing...");
-									task.updateDetailMessage(TASK_DETAIL_PATH, file.getAbsolutePath());
-									task.updateDetailMessage(TASK_DETAIL_CONTEXT, context.stringValue());
-									if (execImport(file, context)) {
-										log.info("Sucessfully imported file '{}' into {}", file.getAbsolutePath(), context.stringValue());
-										try {
-											//delete the imported file
-											log.debug("Deleting {}...", file.getAbsolutePath());
-											file.delete();
-										} catch (Exception ex) {
-											log.error("Error deleing {}: {}", file.getAbsolutePath(), ex.getMessage());
-										}
-									}
-									task.updateProgress(++count);
-									task.updateMessage("watching...");
-									task.updateDetailMessage(TASK_DETAIL_PATH, path);
-									task.removeDetailMessage(TASK_DETAIL_CONTEXT);
-								}
-							} else if (StandardWatchEventKinds.ENTRY_DELETE.equals(event.kind()) && Files.isDirectory(item)) {
-								//TODO: unregister deleted directories?
-								task.updateProgress(++count);
-							}
-							
-						}
-						if (!key.reset()) {
-							// exit loop if the key is not valid
-							// e.g. if the directory was deleted
-							break;
-						}
-					}
-				} catch (IOException e) {
-					log.error("Error registering the import watch service over '{}': {}", path, e.getMessage());
-				} catch (InterruptedException e) {
-					log.error("Import watch service has been interrupted");
-				}
-			}
-
-		};
-
-		Thread t = new Thread(r);
-		t.setName(TASK_GROUP + "(start:" + new Date() + ",path:" + this.path + ")");
-		t.setDaemon(true);
-		t.start();
-
-	}
-
-	@Override
-	public boolean execImport(File file, URI context) {
-		try {
-			String format = detectFormat(file);
-			FileInputStream is = new FileInputStream(file);
-			URI user = userService.getAdminUser();
-			importService.importData(is, format, user, context);
-			return true;
-		} catch (MarmottaImportException e) {
-			log.error("Error importing file {} from the local directory: {}", file.getAbsolutePath(), e.getMessage());
-			return false;
-		} catch (IOException e) {
-			log.error("Error retrieving file {} from the local directory: {}", file.getAbsolutePath(), e.getMessage());
-			return false;
-		}
-	}
-
-	private String detectFormat(File file) throws MarmottaImportException {
-		String format = null;
-		String fileName = file.getName();
-		
-		//mimetype detection
-		RDFFormat rdfFormat = Rio.getParserFormatForFileName(fileName);
-		if (rdfFormat != null && importService.getAcceptTypes().contains(rdfFormat.getDefaultMIMEType())) {
-			format = rdfFormat.getDefaultMIMEType();
-		} else {
-			throw new MarmottaImportException("Suitable RDF parser not found");
-		}
-
-	    //encoding detection
-		try {
-			BufferedInputStream bis = new BufferedInputStream(new FileInputStream(file));
-			CharsetDetector cd = new CharsetDetector();
-			cd.setText(bis);
-			CharsetMatch cm = cd.detect();
-			if (cm != null) {
-				format += "; charset=" + cm.getName();
-			}
-		} catch (IOException e) {
-			log.error("Error detecting charset for '{}': {}", fileName, e.getMessage());
-		}
-
-		return format;
-	}
-	
-	/**
-	 * Get the target context, according the path relative to the base import directory
-	 * 
-	 * @param file
-	 * @return
-	 */
-	private URI getTargetContext(File file) {
-		String subdir = StringUtils.removeStart(file.getParentFile().getAbsolutePath(), this.path);
-		if (StringUtils.isBlank(subdir)) {
-			return contextService.getDefaultContext();
-		} else {
-			subdir = subdir.substring(1); //remove initial slash
-			if (StringUtils.startsWith(subdir, "http%3A%2F%2F")) {
-				try {
-					return contextService.createContext(URLDecoder.decode(subdir, "UTF-8"));
-				} catch (UnsupportedEncodingException e) {
-					log.error("Error url-decoding context name '{}', so using the default one: {}", subdir, e.getMessage());
-					return contextService.getDefaultContext();
-				}
-			} else {
-				return contextService.createContext(configurationService.getBaseContext() + subdir);
-			}
-		}
-	}
-	
-	/**
-	 * Registers a new path in the watcher, keeping the path mapping for future uses
-	 * 
-	 * @param path
-	 * @param watcher
-	 * @param events
-	 * @throws IOException
-	 */
-	private void register(Path path, WatchService watcher, Kind<?>... events) throws IOException {
-		keys.put(path.register(watcher, events), path);
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/rdf/RDFImporterImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/rdf/RDFImporterImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/rdf/RDFImporterImpl.java
index 06d869a..c51c49e 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/rdf/RDFImporterImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/importer/rdf/RDFImporterImpl.java
@@ -62,6 +62,7 @@ public class RDFImporterImpl implements Importer {
     @Inject
     private Logger log;
 
+
     @Inject
     private ConfigurationService configurationService;
 
@@ -75,6 +76,9 @@ public class RDFImporterImpl implements Importer {
 
     private List<String> acceptTypes;
 
+
+
+
     /**
      * Get a collection of all mime types accepted by this io. Used for automatically
      * selecting the appropriate io in ImportService.

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/io/MarmottaIOServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/io/MarmottaIOServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/io/MarmottaIOServiceImpl.java
index 3c8d9b6..f96de33 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/io/MarmottaIOServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/io/MarmottaIOServiceImpl.java
@@ -65,8 +65,12 @@ public class MarmottaIOServiceImpl implements MarmottaIOService {
             producedTypes.addAll(format.getMIMETypes());
         }
         log.info(" - available writers: {}", Arrays.toString(producedTypes.toArray()));
+
+
+
     }
 
+
 	/**
 	 * returns a list of all mimetypes which can be parsed by implemented parsers
 	 * @return
@@ -104,5 +108,4 @@ public class MarmottaIOServiceImpl implements MarmottaIOService {
 	public RDFFormat getParser(String mimetype) {
 		return parserRegistry.getFileFormatForMIMEType(mimetype);
 	}
-	
 }

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/jaxrs/ExceptionMapperServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/jaxrs/ExceptionMapperServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/jaxrs/ExceptionMapperServiceImpl.java
deleted file mode 100644
index 0b6e93b..0000000
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/jaxrs/ExceptionMapperServiceImpl.java
+++ /dev/null
@@ -1,73 +0,0 @@
-/*
- * Licensed to the Apache Software Foundation (ASF) under one or more
- * contributor license agreements.  See the NOTICE file distributed with
- * this work for additional information regarding copyright ownership.
- * The ASF licenses this file to You under the Apache License, Version 2.0
- * (the "License"); you may not use this file except in compliance with
- * the License.  You may obtain a copy of the License at
- *
- *      http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-package org.apache.marmotta.platform.core.services.jaxrs;
-
-import org.apache.marmotta.platform.core.api.jaxrs.ExceptionMapperService;
-import org.apache.marmotta.platform.core.events.SystemStartupEvent;
-import org.apache.marmotta.platform.core.jaxrs.CDIExceptionMapper;
-import org.jboss.resteasy.spi.ResteasyProviderFactory;
-import org.slf4j.Logger;
-
-import javax.annotation.PostConstruct;
-import javax.enterprise.context.ApplicationScoped;
-import javax.enterprise.event.Observes;
-import javax.enterprise.inject.Instance;
-import javax.inject.Inject;
-
-/**
- * This service auto-registers JAX-RS exception mappers implementing the CDIExceptionMapper interface and
- * registers them with RESTEasy. This allows applications based on Marmotta to easily implement and register their
- * own ExceptionMapppers without needing to go into RESTEasy.
- * <p/>
- * Note that ExceptionMappers that are injected via CDI need to be annotated with @Dependent, or otherwise
- * they will be proxied by the CDI implementation and then the generic type cannot be determined.
- *
- * @author Sebastian Schaffert (sschaffert@apache.org)
- */
-@ApplicationScoped
-public class ExceptionMapperServiceImpl implements ExceptionMapperService {
-
-    @Inject
-    private Logger log;
-
-    @Inject
-    private Instance<CDIExceptionMapper<?>> mappers;
-
-    /**
-     * Register Exception Mappers
-     */
-    @PostConstruct
-    public void initialise() {
-        log.info("initialising JAX-RS exception mappers");
-
-        ResteasyProviderFactory factory = ResteasyProviderFactory.getInstance();
-
-        for(CDIExceptionMapper<?> mapper : mappers) {
-            log.debug("registering exception mapper: {}", mapper.getClass().getName());
-
-            factory.registerProviderInstance(mapper);
-        }
-    }
-
-    // trigger startup once configuration service is finished with initialisation
-    public void initEvent(@Observes SystemStartupEvent e) {
-
-    }
-
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/modules/ModuleServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/modules/ModuleServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/modules/ModuleServiceImpl.java
index c54ffa1..b7e4d63 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/modules/ModuleServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/modules/ModuleServiceImpl.java
@@ -37,7 +37,13 @@ import java.net.JarURLConnection;
 import java.net.MalformedURLException;
 import java.net.URL;
 import java.net.URLConnection;
-import java.util.*;
+import java.util.Collection;
+import java.util.Enumeration;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
 
 /**
  * Add file description here!
@@ -47,29 +53,16 @@ import java.util.*;
 @ApplicationScoped
 public class ModuleServiceImpl implements ModuleService {
 
-    private String default_container_name = "Others";
-
     private Logger log = LoggerFactory.getLogger(ModuleServiceImpl.class);
 
     private Set<String> modules;
 
-    private HashMap<String,ArrayList<String>> containers;
-
-    private HashMap<String,Integer> container_weight;
-
     private Map<String,Configuration> configurationMap;
     private Map<String, Configuration> jarURLs;
 
     @PostConstruct
     public void initialize() {
-
-        //default_container_name = configurationService.getStringConfiguration("kiwi.pages.default_container.name",default_container_name);
-        //default_container_number = configurationService.getIntConfiguration("kiwi.pages.default_container.number",default_container_number);
-
         modules = new HashSet<String>();
-        containers = new HashMap<String,ArrayList<String>>();
-        container_weight = new HashMap<String, Integer>();
-
         configurationMap = new HashMap<String, Configuration>();
         jarURLs = new HashMap<String, Configuration>();
 
@@ -90,20 +83,6 @@ public class ModuleServiceImpl implements ModuleService {
                     String moduleName = moduleProperties.getString("name");
                     modules.add(moduleName);
 
-                    String c_name = moduleProperties.getString("container") != null ? moduleProperties.getString("container") : default_container_name;
-
-                    if(containers.get(c_name) == null) {
-                        containers.put(c_name, new ArrayList<String>());
-                    }
-                    containers.get(c_name).add(moduleName);
-
-                    if(container_weight.get(c_name) == null ) {
-                        container_weight.put(c_name,-1);
-                    }
-
-                    if(moduleProperties.getString("container.weight") != null) {
-                        container_weight.put(c_name,Math.max(container_weight.get(c_name),moduleProperties.getInt("container.weight",-1)));
-                    }
 
                     URLConnection urlConnection = moduleUrl.openConnection();
                     URL jarUrl;
@@ -133,6 +112,8 @@ public class ModuleServiceImpl implements ModuleService {
                     } catch(ConfigurationException ex) {
                     }
 
+
+
                     // create runtime configuration
                     MapConfiguration runtimeConfiguration = new MapConfiguration(new HashMap<String, Object>());
                     runtimeConfiguration.setProperty("runtime.jarfile", jarUrl.toString());
@@ -149,7 +130,6 @@ public class ModuleServiceImpl implements ModuleService {
 
 
             }
-            //TODO container should be sortable
         } catch (IOException ex) {
             log.error("I/O error while trying to retrieve kiwi-module.properties file",ex);
         }
@@ -193,7 +173,6 @@ public class ModuleServiceImpl implements ModuleService {
      * @param moduleName
      * @return
      */
-    @Deprecated
     @Override
     public Collection<String> getEntities(String moduleName) {
         Configuration config = getModuleConfiguration(moduleName).getConfiguration();
@@ -212,64 +191,6 @@ public class ModuleServiceImpl implements ModuleService {
         return modules;
     }
 
-    public List<String> listSortedModules() {
-        return sortModules(modules);
-    }
-
-    /**
-     * returns all modules within a container
-     * @param container
-     * @return
-     */
-    public Collection<String> listModules(String container) {
-        if(containers.containsKey(container)) {
-            return containers.get(container);
-        } else return null;
-    }
-
-    @Override
-    public List<String> listSortedModules(String container) {
-        if(containers.containsKey(container)) {
-            return sortModules(containers.get(container));
-        } else return null;
-    }
-
-    /**
-     * sort modules
-     * @param m
-     * @return
-     */
-    private List<String> sortModules(Collection<String> m) {
-        List<String> sorted = new ArrayList<String>(m);
-        Collections.sort(sorted,new Comparator<String>() {
-            @Override
-            public int compare(String o, String o2) {
-                return ((Integer) getWeight(o)).compareTo(getWeight(o2));
-            }
-        });
-        return sorted;
-    }
-
-    /**
-     * Lists containers and underlying modules
-     * @return
-     */
-    public Collection<String> listContainers() {
-        return containers.keySet();
-    }
-
-    @Override
-    public List<String> listSortedContainers() {
-        List sorted = new ArrayList(containers.keySet());
-        Collections.sort(sorted,new Comparator<String>() {
-            @Override
-            public int compare(String o, String o2) {
-                return container_weight.get(o2).compareTo(container_weight.get(o));
-            }
-        });
-        return sorted;
-    }
-
     /**
      * Return the configuration for the module identified by the name given as argument. Returns an
      * immutable Apache Commons Configuration object, or null if the module is not found.
@@ -348,70 +269,15 @@ public class ModuleServiceImpl implements ModuleService {
     }
 
     /**
-     * returns the icon (if set), null otherwise
-     * @param moduleName
-     * @return
-     */
-    @Override
-    public String getIcon(String moduleName) {
-        Configuration config = getModuleConfiguration(moduleName).getConfiguration();
-        if(config != null) return config.getString("icon");
-        else
-            return null;
-    }
-
-    /**
-     * Return a list of admin pages (links)
+     * Return a list of admin pages (paths)
      * @param moduleName
      * @return
      */
     @Override
     public List<String> getAdminPages(String moduleName) {
         Configuration config = getModuleConfiguration(moduleName).getConfiguration();
-        if(config != null) {
-            if(!config.subset("adminpage.").isEmpty()) {
-                ArrayList<String> l = new ArrayList<String>();
-                while(config.getString("adminpage."+l.size()+".link") != null) {
-                    l.add(config.getString("adminpage."+l.size()+".link"));
-                }
-                return l;
-            } else return ImmutableList.copyOf(config.getStringArray("adminpages"));
-        } else
-            return null;
-    }
-
-    /**
-     * returns  more complex admin page description
-     * @param moduleName
-     * @return
-     */
-    @Override
-    public List<HashMap<String,String>> getAdminPageObjects(String moduleName) {
-        Configuration config = getModuleConfiguration(moduleName).getConfiguration();
-        if(config != null) {
-            ArrayList<HashMap<String,String>> l = new ArrayList<HashMap<String,String>>();
-            if(!config.subset("adminpage").isEmpty()) {
-                while(config.getString("adminpage."+l.size()+".link") != null) {
-                    HashMap<String,String> map = new HashMap<String, String>();
-                    map.put("link",config.getString("baseurl")+config.getString("adminpage."+l.size()+".link"));
-                    map.put("title",config.getString("adminpage."+l.size()+".title"));
-                    l.add(map);
-                }
-            } else {
-                for(String path : config.getStringArray("adminpages")) {
-                    HashMap<String,String> map = new HashMap<String, String>();
-                    map.put("link",config.getString("baseurl")+path);
-                    String title;
-                    if(path.lastIndexOf(".") > path.lastIndexOf("/")+1)
-                        title = path.substring(path.lastIndexOf("/")+1,path.lastIndexOf(".")).replaceAll("_"," ");
-                    else
-                        title = path.substring(path.lastIndexOf("/")+1);
-                    map.put("title",title);
-                    l.add(map);
-                }
-            }
-            return l;
-        } else
+        if(config != null) return ImmutableList.copyOf(config.getStringArray("adminpages"));
+        else
             return null;
     }
 
@@ -424,4 +290,4 @@ public class ModuleServiceImpl implements ModuleService {
             return 50;
     }
 
-}
\ No newline at end of file
+}

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixCC.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixCC.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixCC.java
index b231800..d80e055 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixCC.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixCC.java
@@ -18,29 +18,31 @@
 package org.apache.marmotta.platform.core.services.prefix;
 
 import java.io.IOException;
-import java.net.URLEncoder;
-import java.nio.charset.Charset;
+import java.util.HashMap;
 
 import javax.enterprise.context.ApplicationScoped;
 import javax.inject.Inject;
 
-import org.apache.commons.io.IOUtils;
-import org.apache.commons.io.LineIterator;
+import org.apache.http.Header;
 import org.apache.http.HttpEntity;
 import org.apache.http.HttpResponse;
 import org.apache.http.client.ClientProtocolException;
 import org.apache.http.client.ResponseHandler;
 import org.apache.http.client.methods.HttpGet;
+import org.apache.http.client.methods.HttpHead;
+import org.apache.http.util.EntityUtils;
 import org.apache.marmotta.platform.core.api.http.HttpClientService;
 import org.apache.marmotta.platform.core.api.prefix.PrefixProvider;
 import org.apache.marmotta.platform.core.util.http.HttpRequestUtil;
+import org.codehaus.jackson.JsonFactory;
+import org.codehaus.jackson.map.ObjectMapper;
+import org.codehaus.jackson.type.TypeReference;
 import org.slf4j.Logger;
 
 /**
  * Prefix.cc Provider
  * 
  * @author Sergio Fernández
- * @author Jakob Frank <ja...@apache.org>
  *
  */
 @ApplicationScoped
@@ -57,9 +59,9 @@ public class PrefixCC implements PrefixProvider {
 
     @Override
     public String getNamespace(final String prefix) {
-        HttpGet get = new HttpGet(URI + prefix + ".file.txt");
+        HttpGet get = new HttpGet(URI + prefix + ".file.json");
         HttpRequestUtil.setUserAgentString(get, USER_AGENT);
-        get.setHeader("Accept", "text/plain");
+        get.setHeader("Accept", "application/json");
         try {
             return httpClientService.execute(get, new ResponseHandler<String>() {
 
@@ -67,21 +69,20 @@ public class PrefixCC implements PrefixProvider {
                 public String handleResponse(HttpResponse response) throws ClientProtocolException, IOException {
                     if (200 == response.getStatusLine().getStatusCode()) {
                         HttpEntity entity = response.getEntity();
-
-                        final LineIterator it = IOUtils.lineIterator(entity.getContent(), Charset.defaultCharset());
-                        try {
-                            while (it.hasNext()) {
-                                final String l = it.next();
-                                if (l.startsWith(prefix + "\t")) {
-                                    return l.substring(prefix.length()+1);
-                                }
-                            }
-                        } finally {
-                            it.close();
+                        JsonFactory factory = new JsonFactory(); 
+                        ObjectMapper mapper = new ObjectMapper(factory); 
+                        TypeReference<HashMap<String,String>> typeRef = new TypeReference<HashMap<String,String>>() {}; 
+                        HashMap<String,String> result = mapper.readValue(EntityUtils.toString(entity), typeRef); 
+                        if (result.containsKey(prefix)) {
+                        	return result.get(prefix);
+                        } else {
+                        	log.error("Error: prefix '" + prefix + "' not found at prefix.cc");
+                            return null;
                         }
+                    } else {
+                        log.error("Error: prefix '" + prefix + "' not found at prefix.cc");
+                        return null;
                     }
-                    log.error("Error: prefix '" + prefix + "' not found at prefix.cc");
-                    return null;
                 }
             });
         } catch (Exception e) {
@@ -92,32 +93,20 @@ public class PrefixCC implements PrefixProvider {
 
     @Override
     public String getPrefix(final String namespace) {
+        HttpHead head = new HttpHead(URI + "reverse?uri=" + namespace);
+        HttpRequestUtil.setFollowRedirect(head, false);
+        HttpRequestUtil.setUserAgentString(head, USER_AGENT);
         try {
-            HttpGet get = new HttpGet(URI + "reverse?format=txt&uri=" + URLEncoder.encode(namespace, "utf-8"));
-            HttpRequestUtil.setUserAgentString(get, USER_AGENT);
-            get.setHeader("Accept", "text/plain");
-
-            return httpClientService.execute(get, new ResponseHandler<String>() {
-
+            return httpClientService.execute(head, new ResponseHandler<String>() {
                 @Override
                 public String handleResponse(HttpResponse response) throws ClientProtocolException, IOException {
-                    if (200 == response.getStatusLine().getStatusCode()) {
-                        HttpEntity entity = response.getEntity();
-
-                        final LineIterator it = IOUtils.lineIterator(entity.getContent(), Charset.defaultCharset());
-                        try {
-                            while (it.hasNext()) {
-                                final String l = it.next();
-                                if (l.endsWith("\t" + namespace)) {
-                                    return l.substring(0, l.indexOf("\t"));
-                                }
-                            }
-                        } finally {
-                            it.close();
-                        }
+                    if (response.containsHeader("location")) {
+                        Header location = response.getFirstHeader("location");
+                        return location.getValue().substring(URI.length());
+                    } else {
+                    	log.error("Error: reverse namespace lookup for '" + namespace + "' not found at prefix.cc");
+                        return null;
                     }
-                    log.error("Error: reverse namespace lookup for '" + namespace + "' not found at prefix.cc");
-                    return null;
                 }
             });
         } catch (Exception e) {

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceCC.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceCC.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceCC.java
index 5442d60..bc1d667 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceCC.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceCC.java
@@ -20,7 +20,7 @@ package org.apache.marmotta.platform.core.services.prefix;
 import java.net.URISyntaxException;
 
 import org.apache.marmotta.platform.core.api.prefix.PrefixProvider;
-import org.apache.commons.lang3.StringUtils;
+import org.apache.commons.lang.StringUtils;
 
 import javax.enterprise.context.ApplicationScoped;
 import javax.enterprise.inject.Alternative;

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceImpl.java
index b26afe3..ac136fe 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/prefix/PrefixServiceImpl.java
@@ -29,7 +29,7 @@ import org.apache.marmotta.platform.core.api.config.ConfigurationService;
 import org.apache.marmotta.platform.core.api.prefix.PrefixService;
 import org.apache.marmotta.platform.core.events.ConfigurationChangedEvent;
 import org.apache.marmotta.platform.core.events.SesameStartupEvent;
-import org.apache.commons.lang3.StringUtils;
+import org.apache.commons.lang.StringUtils;
 import org.apache.marmotta.commons.http.UriUtil;
 import org.slf4j.Logger;
 
@@ -127,17 +127,6 @@ public class PrefixServiceImpl implements PrefixService {
     public Map<String, String> getMappings() {
         return Collections.unmodifiableMap(cache);
     }
-    
-	@Override
-	public boolean remove(String prefix) {
-		if (cache.containsKey(prefix)) {
-			cache.remove(prefix);
-			configurationService.removeConfiguration(CONFIGURATION_PREFIX + "." + prefix);
-			return true;
-		} else {
-			return false;
-		}
-	}
 
     @Override
     public boolean containsPrefix(String prefix) {

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskImpl.java
index f0ce2b5..56db715 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskImpl.java
@@ -20,6 +20,7 @@ package org.apache.marmotta.platform.core.services.task;
 import org.apache.marmotta.platform.core.api.task.Task;
 import org.apache.marmotta.platform.core.api.task.TaskManagerService;
 
+
 class TaskImpl extends Task {
 
     private static final String WAITING_DETAIL = "Waiting in status";
@@ -48,5 +49,4 @@ class TaskImpl extends Task {
     public void subTaskEnded() {
         updateMessage(detailMessages.remove(WAITING_DETAIL));
     }
-    
 }

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskManagerServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskManagerServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskManagerServiceImpl.java
index 13d874c..69d9d12 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskManagerServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/task/TaskManagerServiceImpl.java
@@ -17,6 +17,17 @@
  */
 package org.apache.marmotta.platform.core.services.task;
 
+import org.apache.marmotta.platform.core.api.task.Task;
+import org.apache.marmotta.platform.core.api.task.TaskInfo;
+import org.apache.marmotta.platform.core.api.task.TaskManagerService;
+
+import org.apache.marmotta.commons.util.HashUtils;
+import org.slf4j.Logger;
+
+import javax.annotation.PostConstruct;
+import javax.annotation.PreDestroy;
+import javax.enterprise.context.ApplicationScoped;
+import javax.inject.Inject;
 import java.lang.ref.WeakReference;
 import java.util.Collections;
 import java.util.Date;
@@ -26,36 +37,23 @@ import java.util.LinkedList;
 import java.util.List;
 import java.util.Map;
 import java.util.Stack;
-import java.util.concurrent.ConcurrentMap;
-
-import javax.annotation.PostConstruct;
-import javax.annotation.PreDestroy;
-import javax.enterprise.context.ApplicationScoped;
-import javax.inject.Inject;
-
-import org.apache.marmotta.commons.util.HashUtils;
-import org.apache.marmotta.platform.core.api.task.Task;
-import org.apache.marmotta.platform.core.api.task.TaskInfo;
-import org.apache.marmotta.platform.core.api.task.TaskManagerService;
-import org.slf4j.Logger;
-
-import com.google.common.collect.MapMaker;
+import java.util.WeakHashMap;
 
 @ApplicationScoped
 public class TaskManagerServiceImpl implements TaskManagerService {
 
-    private static final String  DEFAULT_GROUP = "default";
+    private static final String                        DEFAULT_GROUP = "default";
 
-    private final ConcurrentMap<Thread, Stack<TaskImpl>> tasks;
+    private final WeakHashMap<Thread, Stack<TaskImpl>> tasks;
 
     private final ThreadWatchdog watchdog;
 
     @Inject
-    private Logger log;
+    private Logger                                     log;
 
     @Inject
     public TaskManagerServiceImpl() {
-        tasks = new MapMaker().makeMap();
+        tasks = new WeakHashMap<Thread, Stack<TaskImpl>>();
         watchdog = new ThreadWatchdog(15000);
     }
 

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/AdminTemplatingServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/AdminTemplatingServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/AdminTemplatingServiceImpl.java
index 86c3d4e..2a0279d 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/AdminTemplatingServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/AdminTemplatingServiceImpl.java
@@ -38,7 +38,6 @@ import org.apache.marmotta.platform.core.api.templating.AdminInterfaceService;
 import org.apache.marmotta.platform.core.api.templating.TemplatingService;
 import org.apache.marmotta.platform.core.exception.TemplatingException;
 import org.apache.marmotta.platform.core.model.template.MenuItem;
-import org.apache.marmotta.platform.core.model.template.MenuItemType;
 
 /**
  * User: Thomas Kurz
@@ -54,7 +53,7 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
 
     @Inject
     private ModuleService moduleService;
-
+    
     @Inject
     private TemplatingService templatingService;
 
@@ -62,11 +61,15 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
     private ConfigurationService configurationService;
 
     //some statics
-    private static final String DEFAULT_ICON = "icon-beaker";
+    private static final String TEMPLATE_STRING = "admin.ftl";
+    private static final String DEFAULT_REST_PATH = "/doc/rest/";
+    private static final String DEFAULT_REST_FILE = "overview-summary.html";
+    private static final String DEFAULT_TITLE_FOR_WEBSERVICES = "webservices";
+
 
     //pattern to filter comments content
     private static final Pattern PATTERN = Pattern.compile("\\<!--###BEGIN_([^#]+)###--\\>(.+)\\<!--###END_\\1###--\\>",Pattern.DOTALL);
-    private MenuItem menu;
+    private Menu menu;
 
     /**
      * inits a freemarker template service with a servlet context
@@ -74,17 +77,31 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
      */
     @Override
     public void init(ServletContext context) throws TemplatingException {
-        menu = buildMenu();
+    	menu = new Menu();
         this.context = context;
         try {
-            //try-run to check it from the very beginning
-            templatingService.getTemplate(TemplatingService.ADMIN_TPL);
+        	 //try-run to check it from the very beginning
+            templatingService.getTemplate(TEMPLATE_STRING);
         } catch (Exception e) {
             throw new TemplatingException("Severe Error: admin template cannot be found: " + e.getMessage());
         }
     }
 
     /**
+     * Check whether the templating service considers the resource passed in the path as a menu entry it is
+     * responsible for.
+     *
+     * @param path a url path
+     * @return if the give path points to an admin page
+     */
+    @Override
+    public boolean isMenuEntry(String path) {
+        if(menu.path_titles.keySet().contains(configurationService.getPath()+path)) return true;
+        if(path.contains(DEFAULT_REST_PATH)) return true;
+        else return false;
+    }
+
+    /**
      * this method wraps a file with a specified admin template. If the file is not a admin page,
      * the bytes are returned unprocessed
      * @param bytes content represented in a byte array
@@ -96,21 +113,21 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
         if(!configurationService.getBooleanConfiguration("templating.cache.enabled",true) && context!=null) {
             init(context);
         }
-
-        //set active
-        menu.setActive(path);
-
+        //apply template
+        if(!isMenuEntry(path)) return bytes;
+        //activate
+        String module = menu.getCurrentModule(configurationService.getPath() + path);
         //fill data model
         Map<String, Object> datamodel = new HashMap<String,Object>();
-        for(Properties p : Properties.values()) {
-            datamodel.put(p.name(),"<!-- "+p.name()+" not defined -->");
-        }
+    	for(Properties p : Properties.values()) {
+    		datamodel.put(p.name(),"<!-- "+p.name()+" not defined -->");
+    	}
         //begin hack!!!
         datamodel.put("USER_MODULE_IS_ACTIVE", moduleService.listModules().contains("Users"));
         //end hack!!!
-
-        //add menu
-        datamodel.put("MENU",menu.getProperties());
+        datamodel.put("MODULE_MENU",menu.menuItems);
+        datamodel.put("CURRENT_TITLE", getNameFromPath(path));
+        datamodel.put("CURRENT_MODULE", module);
         try {
             String s = new String(bytes);
             Matcher m = PATTERN.matcher(s);
@@ -124,7 +141,7 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
         //make magic happen
         try {
             ByteArrayOutputStream bos = new ByteArrayOutputStream();
-            templatingService.process(TemplatingService.ADMIN_TPL, datamodel, new OutputStreamWriter(bos));
+        	templatingService.process(TEMPLATE_STRING, datamodel, new OutputStreamWriter(bos));
             bytes = bos.toByteArray();
             bos.flush();
             bos.close();
@@ -134,49 +151,133 @@ public class AdminTemplatingServiceImpl implements AdminInterfaceService {
         return bytes;
     }
 
-    @Override
-    public boolean isMenuEntry(String path) {
-        return menu.setActive(path);
-    }
-
     /**
-     * build menu
-     * @return
+     * This object represents a menu for the admin interface. It is build using the ModuleService.
      */
-    private MenuItem buildMenu() {
-        MenuItem menu = new MenuItem("MENU", MenuItemType.ROOT);
-
-        for(String container_string : moduleService.listSortedContainers()) {
-            MenuItem container = new MenuItem(container_string, MenuItemType.CONTAINER);
-
-            //add modules
-            for(String module_string : moduleService.listSortedModules(container_string)) {
-                MenuItem module = new MenuItem(module_string, MenuItemType.MODULE);
-                module.set("path",moduleService.getModuleWeb(module_string));
-                if(moduleService.getIcon(module_string) != null)
-                    module.set("icon",moduleService.getIcon(module_string));
-
-                //add pages
-                for(HashMap<String,String> page_object : moduleService.getAdminPageObjects(module_string)) {
-                    MenuItem page = new MenuItem(page_object.get("title"), MenuItemType.PAGE);
-                    page.set("path",page_object.get("link"));
-                    module.addItem(page);
-                }
+    class Menu {
+
+        public List<MenuItem> menuItems;
+        public Map<String,String> path_titles;
 
-                //add webservice
-                if(!moduleService.getWebservices(module_string).isEmpty()) {
-                    MenuItem page = new MenuItem(TemplatingService.DEFAULT_WEBSERVICE_TITLE, MenuItemType.WEBSERVICE);
-                    page.set("path",module.get("path")+TemplatingService.DEFAULT_REST_PATH+TemplatingService.DEFAULT_REST_FILE);
-                    module.addItem(page);
+        public Menu() {
+            //instantiate
+            menuItems = new ArrayList<MenuItem>();
+            path_titles = new HashMap<String, String>();
+            //sort menu
+            ArrayList<String> menuSorted = new ArrayList<String>(moduleService.listModules());
+            if(configurationService.getBooleanConfiguration("templating.sort_by_weight", true)) {
+                Collections.sort(menuSorted, new Comparator<String>() {
+                    @Override
+                    public int compare(String o1, String o2) {
+                        final int w1 = moduleService.getWeight(o1), w2 = moduleService.getWeight(o2);
+                        if (w1 == w2) return o1.compareTo(o2);
+                        return w1 - w2;
+                    }
+                });
+            } else {
+                Collections.sort(menuSorted);
+            }
+
+            //build structure
+            for(String module : menuSorted) {
+                String path = configurationService.getPath() + moduleService.getModuleWeb(module);
+                if(moduleHasAdminPages(module)) {
+                    MenuItem menu_item = new MenuItem();
+                    menu_item.getProperties().put("title",module);
+                    menu_item.getProperties().put("baseurl",moduleService.getModuleConfiguration(module).getConfiguration().getString("baseurl","/"+module));
+                    for(String page : moduleService.getAdminPages(module)) {
+                        if(page.equals("")) {
+                            continue;
+                        }
+                        MenuItem submenu = new MenuItem();
+                        submenu.getProperties().put("title",getNameFromPath(page));
+                        submenu.getProperties().put("path",path+page);
+                        //test if it is active
+                        menu_item.getSubmenu().add(submenu);
+                        path_titles.put(path+page,page);
+                    }
+                    if(moduleService.getWebservices(module)!=null &&
+                            !moduleService.getWebservices(module).isEmpty() &&
+                            !moduleService.getWebservices(module).iterator().next().equals("")) {
+                        MenuItem submenu = new MenuItem();
+                        submenu.getProperties().put("title",DEFAULT_TITLE_FOR_WEBSERVICES);
+                        submenu.getProperties().put("path",path+DEFAULT_REST_PATH+DEFAULT_REST_FILE);
+                        //test if it is active
+                        menu_item.getSubmenu().add(submenu);
+                        path_titles.put(path+DEFAULT_REST_PATH+DEFAULT_REST_FILE,DEFAULT_TITLE_FOR_WEBSERVICES);
+                    }
+                    menuItems.add(menu_item);
                 }
+            }
+        }
 
-                //add if there are pages to display
-                if(!module.isEmpty()) container.addItem(module);
+        /**
+         * get current module and set submenu to active
+         * @param path the current system path
+         * @return current module name
+         */
+        public String getCurrentModule(String path) {
+            String module = "";
+            boolean active = false;
+            //test with module and submenu must be active
+            for(MenuItem menuItem : menuItems) {
+                if(path.startsWith((String)menuItem.getProperties().get("baseurl"))) {
+                    module = (String)menuItem.getProperties().get("title");
+                }
+                menuItem.getProperties().put("active",false);
+                for(MenuItem submenu : menuItem.getSubmenu()) {
+                    if(submenu.getProperties().get("path").equals(path)) {
+                        submenu.getProperties().put("active",true);
+                        menuItem.getProperties().put("active",true);
+                        module = (String)menuItem.getProperties().get("title");
+                        active = true;
+                    } else {
+                        submenu.getProperties().put("active",false);
+                    }
+                }
             }
-            menu.addItem(container);
+            //workaround for webservices (autogenerated pages that are nit fix stored in the menu structure)
+            if(!active) {
+                for(MenuItem menuItem : menuItems) {
+                    if(module.equals(menuItem.getProperties().get("title"))) {
+                        for(MenuItem submenu : menuItem.getSubmenu()) {
+                            if(submenu.getProperties().get("title").equals(DEFAULT_TITLE_FOR_WEBSERVICES)) {
+                                submenu.getProperties().put("active",true);
+                                menuItem.getProperties().put("active",true);
+                            }
+                        }
+                    }
+                }
+            }
+            return module;
+        }
+
+        /**
+         * Tests if a module should appear in the menu
+         * @param module a module name
+         * @return true is module should appear, false if not
+         */
+        private boolean moduleHasAdminPages(String module) {
+            if(moduleService.getAdminPages(module)!=null &&
+                    !moduleService.getAdminPages(module).isEmpty() &&
+                    !moduleService.getAdminPages(module).get(0).equals(""))
+                return true;
+            else if(moduleService.getWebservices(module)!=null &&
+                    !moduleService.getWebservices(module).isEmpty() &&
+                    !moduleService.getWebservices(module).iterator().next().equals("")) return true;
+            return false;
         }
 
-        return menu;
     }
 
-}
\ No newline at end of file
+    /**
+     * returns a proper name for a path by using the filename.
+     * @param path
+     * @return
+     */
+    private String getNameFromPath(String path) {
+        if(path.contains(DEFAULT_REST_PATH)) return DEFAULT_TITLE_FOR_WEBSERVICES;
+        return path.substring(path.lastIndexOf("/")).replaceAll("/"," ").replaceAll("_"," ").replaceAll(".html","").replaceAll(".jsp","");
+    }
+
+}

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/TemplatingServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/TemplatingServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/TemplatingServiceImpl.java
index 6942443..56728cc 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/TemplatingServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/templating/TemplatingServiceImpl.java
@@ -31,7 +31,6 @@ import javax.enterprise.context.ApplicationScoped;
 import javax.enterprise.event.Observes;
 import javax.inject.Inject;
 
-import com.google.common.base.Preconditions;
 import org.apache.marmotta.platform.core.api.config.ConfigurationService;
 import org.apache.marmotta.platform.core.api.templating.TemplatingService;
 import org.apache.marmotta.platform.core.events.ConfigurationChangedEvent;
@@ -39,7 +38,6 @@ import org.apache.marmotta.platform.core.events.ConfigurationChangedEvent;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
 import freemarker.template.TemplateException;
-import org.apache.marmotta.platform.core.startup.MarmottaStartupService;
 
 /**
  * Template Service Implementation
@@ -54,18 +52,13 @@ public class TemplatingServiceImpl implements TemplatingService {
     @Inject
     private ConfigurationService configurationService;
 
-    @Inject
-    private MarmottaStartupService startupService;
-
 	public TemplatingServiceImpl() {
 		super();
 		common = new HashMap<String,String>();
 	}
 
 	@PostConstruct
-	public void initDataModel() {
-        Preconditions.checkState(startupService.isHostStarted());
-
+	public void initDataModel() {        
         String project = configurationService.getStringConfiguration("kiwi.pages.project", DEFAULT_PROJECT);
         common.put("PROJECT", project);
         common.put("DEFAULT_STYLE", configurationService.getStringConfiguration("kiwi.pages.style_path", DEFAULT_STYLE));

http://git-wip-us.apache.org/repos/asf/incubator-marmotta/blob/4aa87dbe/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/triplestore/ContextServiceImpl.java
----------------------------------------------------------------------
diff --git a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/triplestore/ContextServiceImpl.java b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/triplestore/ContextServiceImpl.java
index afe1792..189c566 100644
--- a/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/triplestore/ContextServiceImpl.java
+++ b/platform/marmotta-core/src/main/java/org/apache/marmotta/platform/core/services/triplestore/ContextServiceImpl.java
@@ -30,7 +30,7 @@ import javax.enterprise.inject.Produces;
 import javax.inject.Inject;
 import javax.inject.Named;
 
-import org.apache.commons.lang3.StringUtils;
+import org.apache.commons.lang.StringUtils;
 import org.apache.marmotta.commons.sesame.repository.ResourceUtils;
 import org.apache.marmotta.platform.core.api.config.ConfigurationService;
 import org.apache.marmotta.platform.core.api.importer.ImportService;
@@ -45,8 +45,6 @@ import org.apache.marmotta.platform.core.qualifiers.kspace.InferredKnowledgeSpac
 import org.apache.marmotta.platform.core.qualifiers.kspace.SystemKnowledgeSpace;
 import org.openrdf.model.Resource;
 import org.openrdf.model.URI;
-import org.openrdf.model.ValueFactory;
-import org.openrdf.model.util.Literals;
 import org.openrdf.model.vocabulary.RDFS;
 import org.openrdf.repository.RepositoryConnection;
 import org.openrdf.repository.RepositoryException;
@@ -180,10 +178,9 @@ public class ContextServiceImpl implements ContextService {
             try {
                 conn.begin();
                 checkConnectionNamespace(conn);
-                ValueFactory valueFactory = conn.getValueFactory();
-				URI ctx = valueFactory.createURI(uri);
+                URI ctx = conn.getValueFactory().createURI(uri);
                 if (StringUtils.isNotBlank(label)) {
-                    conn.add(ctx, RDFS.LABEL, Literals.createLiteral(valueFactory, label), ctx);
+                    conn.add(ctx, RDFS.LABEL, conn.getValueFactory().createLiteral(label), ctx);
                 }
                 return ctx;
             } finally {