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Posted to commits@ctakes.apache.org by dl...@apache.org on 2013/12/20 20:53:46 UTC
svn commit: r1552796 -
/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java
Author: dligach
Date: Fri Dec 20 19:53:45 2013
New Revision: 1552796
URL: http://svn.apache.org/r1552796
Log:
AE to remove event-time relations for which we have no time or event duration data.
Added:
ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java (with props)
Added: ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java?rev=1552796&view=auto
==============================================================================
--- ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java (added)
+++ ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java Fri Dec 20 19:53:45 2013
@@ -0,0 +1,61 @@
+package org.apache.ctakes.temporal.ae;
+
+import java.io.File;
+import java.io.IOException;
+import java.util.Map;
+
+import org.apache.ctakes.temporal.ae.feature.duration.DurationDistributionFeatureExtractor.Callback;
+import org.apache.ctakes.typesystem.type.relation.BinaryTextRelation;
+import org.apache.ctakes.typesystem.type.relation.RelationArgument;
+import org.apache.ctakes.typesystem.type.textsem.EventMention;
+import org.apache.uima.analysis_engine.AnalysisEngineProcessException;
+import org.apache.uima.cas.CASException;
+import org.apache.uima.jcas.JCas;
+import org.uimafit.component.JCasAnnotator_ImplBase;
+import org.uimafit.util.JCasUtil;
+
+import com.google.common.base.Charsets;
+import com.google.common.collect.Lists;
+import com.google.common.io.Files;
+
+public class PreserveCertainEventTimeRelations extends JCasAnnotator_ImplBase {
+
+ public static final String GOLD_VIEW_NAME = "GoldView";
+
+ @Override
+ public void process(JCas jCas) throws AnalysisEngineProcessException {
+
+ File durationLookup = new File("/Users/Dima/Boston/Thyme/Duration/Output/Duration/distribution.txt");
+ Map<String, Map<String, Float>> textToDistribution = null;
+ try {
+ textToDistribution = Files.readLines(durationLookup, Charsets.UTF_8, new Callback());
+ } catch(IOException e) {
+ e.printStackTrace();
+ return;
+ }
+
+ JCas goldView;
+ try {
+ goldView = jCas.getView(GOLD_VIEW_NAME);
+ } catch (CASException e) {
+ throw new AnalysisEngineProcessException(e);
+ }
+
+ for (BinaryTextRelation relation : Lists.newArrayList(JCasUtil.select(goldView, BinaryTextRelation.class))) {
+ RelationArgument arg1 = relation.getArg1();
+ RelationArgument arg2 = relation.getArg2();
+ String arg1text = arg1.getArgument().getCoveredText().toLowerCase();
+ String arg2text = arg2.getArgument().getCoveredText().toLowerCase();
+ if(arg1.getArgument() instanceof EventMention && arg2.getArgument() instanceof EventMention){
+ if(textToDistribution.containsKey(arg1text) || textToDistribution.containsKey(arg2text)) {
+ // keep relations where on of the arguments has duration data
+ continue;
+ }
+
+ arg1.removeFromIndexes();
+ arg2.removeFromIndexes();
+ relation.removeFromIndexes();
+ }
+ }
+ }
+}
\ No newline at end of file
Propchange: ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/PreserveCertainEventTimeRelations.java
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