You are viewing a plain text version of this content. The canonical link for it is here.
Posted to issues@beam.apache.org by "ASF GitHub Bot (Jira)" <ji...@apache.org> on 2020/04/11 09:18:00 UTC
[jira] [Work logged] (BEAM-9743) TFRecordCodec not attempt to fully
read/write
[ https://issues.apache.org/jira/browse/BEAM-9743?focusedWorklogId=420715&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-420715 ]
ASF GitHub Bot logged work on BEAM-9743:
----------------------------------------
Author: ASF GitHub Bot
Created on: 11/Apr/20 09:17
Start Date: 11/Apr/20 09:17
Worklog Time Spent: 10m
Work Description: lukemin89 commented on pull request #11397: [BEAM-9743] Fix TFRecordCodec to try harder to read/write
URL: https://github.com/apache/beam/pull/11397
ReadableByteChannel/WritableByteChannel specifies that a single read/write request might be ignored, and read/write from 0 bytes to n bytes, where n is buffer.remaining(), even if there's more contents/space left in the channel.
I recently encountered this issue when trying to switch from GZIP compression to ZSTD compression.
Make it try harder to read/write header/footer/data.
------------------------
Thank you for your contribution! Follow this checklist to help us incorporate your contribution quickly and easily:
- [ R: @lukecwik ] [**Choose reviewer(s)**](https://beam.apache.org/contribute/#make-your-change) and mention them in a comment (`R: @username`).
- [ ] Format the pull request title like `[BEAM-XXX] Fixes bug in ApproximateQuantiles`, where you replace `BEAM-XXX` with the appropriate JIRA issue, if applicable. This will automatically link the pull request to the issue.
- [ ] Update `CHANGES.md` with noteworthy changes.
- [ ] If this contribution is large, please file an Apache [Individual Contributor License Agreement](https://www.apache.org/licenses/icla.pdf).
See the [Contributor Guide](https://beam.apache.org/contribute) for more tips on [how to make review process smoother](https://beam.apache.org/contribute/#make-reviewers-job-easier).
Post-Commit Tests Status (on master branch)
------------------------------------------------------------------------------------------------
Lang | SDK | Apex | Dataflow | Flink | Gearpump | Samza | Spark
--- | --- | --- | --- | --- | --- | --- | ---
Go | [](https://builds.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/) | --- | --- | [](https://builds.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/) | --- | --- | [](https://builds.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/)
Java | [](https://builds.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Apex/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Gearpump/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/)
Python | [](https://builds.apache.org/job/beam_PostCommit_Python2/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Python35/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/) | --- | [](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PreCommit_Python2_PVR_Flink_Cron/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PostCommit_Python35_VR_Flink/lastCompletedBuild/) | --- | --- | [](https://builds.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/)
XLang | --- | --- | --- | [](https://builds.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/) | --- | --- | [](https://builds.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/)
Pre-Commit Tests Status (on master branch)
------------------------------------------------------------------------------------------------
--- |Java | Python | Go | Website
--- | --- | --- | --- | ---
Non-portable | [](https://builds.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/)<br>[](https://builds.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/) | [](https://builds.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/)
Portable | --- | [](https://builds.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/) | --- | ---
See [.test-infra/jenkins/README](https://github.com/apache/beam/blob/master/.test-infra/jenkins/README.md) for trigger phrase, status and link of all Jenkins jobs.
----------------------------------------------------------------
This is an automated message from the Apache Git Service.
To respond to the message, please log on to GitHub and use the
URL above to go to the specific comment.
For queries about this service, please contact Infrastructure at:
users@infra.apache.org
Issue Time Tracking
-------------------
Worklog Id: (was: 420715)
Remaining Estimate: 0h
Time Spent: 10m
> TFRecordCodec not attempt to fully read/write
> ---------------------------------------------
>
> Key: BEAM-9743
> URL: https://issues.apache.org/jira/browse/BEAM-9743
> Project: Beam
> Issue Type: Bug
> Components: sdk-java-core
> Reporter: Kyoungha Min
> Assignee: Kyoungha Min
> Priority: Critical
> Time Spent: 10m
> Remaining Estimate: 0h
>
> Seems like it only happens with Zstd compression (or any other picky input stream that refuse to read fully). Zstd seems very picky at giving out data.
> The parts with the issue are
> [https://github.com/apache/beam/blob/c7911043510a266078a3dc8faef7a1dbe1f598c5/sdks/java/core/src/main/java/org/apache/beam/sdk/io/TFRecordIO.java#L672]
> [https://github.com/apache/beam/blob/c7911043510a266078a3dc8faef7a1dbe1f598c5/sdks/java/core/src/main/java/org/apache/beam/sdk/io/TFRecordIO.java#L699]
>
> And not so problem within the beam application (As all WritableByteChannels in beam-java-sdk-core are backed by some OutputStream), but still not following the WritableByteChannel specification,
> [https://github.com/apache/beam/blob/c7911043510a266078a3dc8faef7a1dbe1f598c5/sdks/java/core/src/main/java/org/apache/beam/sdk/io/TFRecordIO.java#L720-L727]
>
> ReadableByteChannel/WritableByteChannel Javadoc specifies that they are not required to read/write fully, and can refuse to read/write time to time.
--
This message was sent by Atlassian Jira
(v8.3.4#803005)