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Posted to dev@clerezza.apache.org by "Paolo Ciccarese (JIRA)" <ji...@apache.org> on 2011/08/25 19:33:29 UTC
[jira] [Created] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Enable UIMA results mapping to Annotation Ontology (AO) RDF format
------------------------------------------------------------------
Key: CLEREZZA-628
URL: https://issues.apache.org/jira/browse/CLEREZZA-628
Project: Clerezza
Issue Type: New Feature
Environment: Any
Reporter: Paolo Ciccarese
Priority: Minor
This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
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[jira] [Updated] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Paolo Ciccarese (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Paolo Ciccarese updated CLEREZZA-628:
-------------------------------------
Attachment: uima.ontologies.ao.zip
Annotation Ontology files for the UIMA module.
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Priority: Minor
> Labels: patch
> Attachments: ao.casconsumer.patch, ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
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[jira] [Updated] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Paolo Ciccarese (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Paolo Ciccarese updated CLEREZZA-628:
-------------------------------------
Attachment: (was: ao.casconsumer.patch)
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Priority: Minor
> Labels: patch
> Attachments: ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
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[jira] [Updated] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Tommaso Teofili (Updated) (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Tommaso Teofili updated CLEREZZA-628:
-------------------------------------
Fix Version/s: 0.2-incubating
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Assignee: Tommaso Teofili
> Priority: Minor
> Labels: patch
> Fix For: 0.2-incubating
>
> Attachments: ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
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[jira] [Commented] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Tommaso Teofili (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13093221#comment-13093221 ]
Tommaso Teofili commented on CLEREZZA-628:
------------------------------------------
SGA and iCLA have been acknowledged so this can be committed.
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Priority: Minor
> Labels: patch
> Attachments: ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
--
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[jira] [Updated] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Paolo Ciccarese (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Paolo Ciccarese updated CLEREZZA-628:
-------------------------------------
Attachment: ao.casconsumer.patch
Patch for extending the ClerezzaCASConsumer with the Annotation Ontology mapping
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Priority: Minor
> Labels: patch
> Attachments: ao.casconsumer.patch, ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
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[jira] [Resolved] (CLEREZZA-628) Enable UIMA results mapping to
Annotation Ontology (AO) RDF format
Posted by "Tommaso Teofili (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/CLEREZZA-628?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Tommaso Teofili resolved CLEREZZA-628.
--------------------------------------
Resolution: Fixed
Assignee: Tommaso Teofili
patch applied, thanks Paolo for your contribution
> Enable UIMA results mapping to Annotation Ontology (AO) RDF format
> ------------------------------------------------------------------
>
> Key: CLEREZZA-628
> URL: https://issues.apache.org/jira/browse/CLEREZZA-628
> Project: Clerezza
> Issue Type: New Feature
> Environment: Any
> Reporter: Paolo Ciccarese
> Assignee: Tommaso Teofili
> Priority: Minor
> Labels: patch
> Attachments: ao.casconsumer.patch, uima.ontologies.ao.zip
>
>
> This is the code for mapping the UIMA results to the Annotation Ontology (AO) RDF format - http://tinyurl.com/23p5dcc . The idea is to provide a common and stable way for the text mining algorithm to expose their results in a way that can be integrated with other efforts in our field. This can be an important step for eliminating the fragmentation in the bio-medical community where most of the text mining and entity recognition services have a different communication interface.
--
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