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Posted to commits@ctakes.apache.org by ja...@apache.org on 2017/03/02 16:21:57 UTC
svn commit: r1785157 - in
/ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima:
CreateZonerDescriptor.java ZoneAnnotator.java
Author: james-masanz
Date: Thu Mar 2 16:21:57 2017
New Revision: 1785157
URL: http://svn.apache.org/viewvc?rev=1785157&view=rev
Log:
remove unused imports and old commented-out code
Modified:
ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/CreateZonerDescriptor.java
ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java
Modified: ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/CreateZonerDescriptor.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/CreateZonerDescriptor.java?rev=1785157&r1=1785156&r2=1785157&view=diff
==============================================================================
--- ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/CreateZonerDescriptor.java (original)
+++ ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/CreateZonerDescriptor.java Thu Mar 2 16:21:57 2017
@@ -20,16 +20,13 @@ package org.mitre.medfacts.uima;
import java.io.FileNotFoundException;
import java.io.FileOutputStream;
-import java.io.IOException;
import java.net.URI;
import java.net.URISyntaxException;
-import org.apache.ctakes.core.ae.DocumentIdPrinterAnalysisEngine;
import org.apache.uima.analysis_engine.AnalysisEngineDescription;
import org.apache.uima.resource.ResourceInitializationException;
import org.apache.uima.fit.factory.AggregateBuilder;
import org.apache.uima.fit.factory.AnalysisEngineFactory;
-import org.xml.sax.SAXException;
public class CreateZonerDescriptor
{
Modified: ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java?rev=1785157&r1=1785156&r2=1785157&view=diff
==============================================================================
--- ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java (original)
+++ ctakes/trunk/ctakes-assertion-zoner/src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java Thu Mar 2 16:21:57 2017
@@ -24,31 +24,20 @@ import java.net.URISyntaxException;
import java.net.URL;
import java.util.Iterator;
import java.util.List;
-import org.apache.log4j.Level;
import org.apache.log4j.Logger;
import org.apache.ctakes.assertion.zoner.types.Heading;
-import org.apache.ctakes.assertion.zoner.types.Subzone;
import org.apache.ctakes.assertion.zoner.types.Zone;
import org.apache.uima.UimaContext;
-//import org.apache.uima.analysis_component.JCasAnnotator_ImplBase;
import org.apache.uima.analysis_engine.AnalysisEngineProcessException;
import org.apache.uima.jcas.JCas;
-import org.apache.uima.resource.DataResource;
-import org.apache.uima.resource.ResourceAccessException;
import org.apache.uima.resource.ResourceInitializationException;
-import org.apache.uima.resource.SharedResourceObject;
-//import org.mitre.medfacts.zoner.*;
import org.mitre.medfacts.zoner.ZonerCli;
import org.mitre.medfacts.zoner.ZonerCli.HeadingRange;
import org.mitre.medfacts.zoner.ZonerCli.Range;
-//import org.mitre.medfacts.zoner.ZonerCliSimplified;
-//import org.mitre.medfacts.zoner.ZonerCliSimplified.HeadingRange;
-//import org.mitre.medfacts.zoner.ZonerCliSimplified.Range;
import org.apache.uima.fit.component.JCasAnnotator_ImplBase;
import org.apache.uima.fit.descriptor.ConfigurationParameter;
-import org.apache.uima.fit.descriptor.ExternalResource;
import org.apache.uima.fit.descriptor.TypeCapability;
@TypeCapability(outputs =
@@ -72,31 +61,17 @@ public class ZoneAnnotator extends JCasA
protected final Logger logger = Logger.getLogger(ZoneAnnotator.class.getName());
- //private ZonerCliSimplified zonerCli;
-
@Override
public void initialize (UimaContext aContext) throws ResourceInitializationException {
super.initialize(aContext);
- // Create ZonerCli using the resource URI
-// URI uri;
-// try {
-// uri = getContext().getResourceURI(PARAM_SECTION_REGEX_FILE_NAME);
-// } catch (ResourceAccessException e) {
-// e.printStackTrace();
-// throw new ResourceInitializationException(e);
-// }
- //zonerCli = new ZonerCliSimplified(sectionRegexFileUri);
-
}
private int countOfIndexOutOfBounds = 0;
@Override
public void process(JCas jcas) throws AnalysisEngineProcessException {
-// ZonerCliSimplified zonerCli =
-// new ZonerCliSimplified(sectionRegexFileUri);
- System.out.println("sectionRegexFileUriString: " + sectionRegexFileUriString);
+ System.out.println("sectionRegexFileUriString: " + sectionRegexFileUriString);
URL sectionRegexFileInClasspathUrl =
getClass().getClassLoader().getResource(sectionRegexFileUriString);
System.out.println("sectionRegexFileInClasspathUrl: " + sectionRegexFileInClasspathUrl);
@@ -141,18 +116,6 @@ public class ZoneAnnotator extends JCasA
logger.info(String.format("added new zone annotation [%d-%d] \"%s\"", zAnnot.getBegin(), zAnnot.getEnd(), zAnnot.getCoveredText()));
}
-// List<Range> subsectionRangeList = zonerCli.getSubsections();
-// for (Iterator<Range> i = subsectionRangeList.iterator(); i.hasNext(); ) {
-// Range r = i.next();
-// Subzone sAnnot = new Subzone(jcas);
-// sAnnot.setBegin(r.getBegin());
-// sAnnot.setEnd(r.getEnd());
-// sAnnot.setLabel(r.getLabel());
-// sAnnot.addToIndexes();
-// logger.info(String.format("added new subzone annotation [%d-%d] \"%s\"", sAnnot.getBegin(), sAnnot.getEnd(), sAnnot.getCoveredText()));
-// }
-
-
// Add the heading annotations
List<HeadingRange> headings = zonerCli.getHeadings();