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Posted to commits@uima.apache.org by re...@apache.org on 2020/11/10 21:38:38 UTC
[uima-uimaj] branch
bugfix/UIMA-6276-Potential-memory-leak-in-FSClassRegistry updated (4007121
-> 18ebf33)
This is an automated email from the ASF dual-hosted git repository.
rec pushed a change to branch bugfix/UIMA-6276-Potential-memory-leak-in-FSClassRegistry
in repository https://gitbox.apache.org/repos/asf/uima-uimaj.git.
from 4007121 [UIMA-6276] Potential memory leak in FSClassRegistry
add 5c75217 [UIMA-6283] Annotation relation predicates
add aa003d9 [UIMA-6274] Setting feature on builtin JCas cover class that was loaded before initializing TypeSystemImpl fails
add aa4c0cf [UIMA-6274] Setting feature on builtin JCas cover class that was loaded before initializing TypeSystemImpl fails
add dc80b4b Merge branch 'master' into bugfix/UIMA-6274-Setting-feature-on-builtin-JCas-cover-class-that-was-loaded-before-initializing-TypeSystemImpl-fails
add 308dad4 Merge pull request #67 from apache/bugfix/UIMA-6274-Setting-feature-on-builtin-JCas-cover-class-that-was-loaded-before-initializing-TypeSystemImpl-fails
add 08b17c1 [UIMA-6273] isBeforeV3 variable not reset in BinaryCasSerDes
add d27bb44 Merge pull request #74 from apache/bugfix/UIMA-6273-isBeforeV3-variable-not-reset-in-BinaryCasSerDes
add a86f597 [NO JIRA] Fix JavaDoc and exclude .factorypath Eclipse configuration file from rat check
add 9ca3f7e Merge pull request #75 from apache/bugfix/NO-JIRA-Fix-JavaDoc-and-exclude-factorypath-from-rat-check
add 8723c73 [UIMA-6282] select.at() may fail to respect bounds
add da1d449 Merge pull request #72 from apache/bugfix/UIMA-6282-select.at-may-fail-to-respect-bounds
add a3280e0 Merge branch 'master' into feature/UIMA-6283-Annotation-relation-predicates
add 40fccf8 [UIMA-6283] Annotation relation predicates
add 9cb892a UIMA-6284: select.following() fails to find adjacent annotations
add c976921 UIMA-6284: select.following() fails to find adjacent annotations
add bab3643 Merge branch 'bugfix/UIMA-6284-select.following-fails-to-find-adjacent-annotations' into feature/UIMA-6283-Annotation-relation-predicates
add 8d4718f [UIMA-6285] select.following() on a zero-width annotation returns other zero-width annotation at same location
add 1a80f18 Merge branch 'bugfix/UIMA-6285-select.following-on-a-zero-width-annotation-returns-other-zero-width-annotation-at-same-location' into feature/UIMA-6283-Annotation-relation-predicates
add d0efd2d [UIMA-6283] Annotation relation predicates
add 4a17a35 Merge pull request #76 from apache/bugfix/UIMA-6284-select.following-fails-to-find-adjacent-annotations
add 6d0aa68 Merge branch 'master' into bugfix/UIMA-6285-select.following-on-a-zero-width-annotation-returns-other-zero-width-annotation-at-same-location
add e532727 Merge pull request #77 from apache/bugfix/UIMA-6285-select.following-on-a-zero-width-annotation-returns-other-zero-width-annotation-at-same-location
add 89c53d1 [UIMA-6286] select following finds zero-width annotation at reference end position
add 2c0819d Merge branch 'bugfix/UIMA-6286-select-following-finds-zero-width-annotation-at-reference-end-position' into feature/UIMA-6283-Annotation-relation-predicates
add 5de803d [UIMA-6283] Annotation relation predicates
add 0a72e9f [UIMA-6286] select following finds zero-width annotation at reference end position
add 0dc73ec Merge branch 'bugfix/UIMA-6286-select-following-finds-zero-width-annotation-at-reference-end-position' into feature/UIMA-6283-Annotation-relation-predicates
add aad00dc [UIMA-6286] select following finds zero-width annotation at reference end position
add 3060d15 Merge branch 'bugfix/UIMA-6286-select-following-finds-zero-width-annotation-at-reference-end-position' into feature/UIMA-6283-Annotation-relation-predicates
add 73f216f Merge pull request #78 from apache/bugfix/UIMA-6286-select-following-finds-zero-width-annotation-at-reference-end-position
add c69ba87 Merge branch 'master' into feature/UIMA-6283-Annotation-relation-predicates
add bbd20f4 [UIMA-6283] Annotation relation predicates
add eb800df [UIMA-6283] Annotation relation predicates
add 240f45f [UIMA-6283] Annotation relation predicates
add c78a62d [UIMA-6283] Annotation relation predicates
add edece98 [UIMA-6283] Annotation relation predicates
add 951cf10 [UIMA-6283] Annotation relation predicates
add b1a286b [UIMA-6283] Annotation relation predicates
add c181642 [UIMA-6287] FSArray.spliterator() fails to handle PEAR case
add 6ca1699 [UIMA-6287] FSArray.spliterator() fails to handle PEAR case
add cae7037 Merge pull request #79 from apache/bugfix/UIMA-6287-FSArray.spliterator-fails-to-handle-PEAR-case
add edabffd Merge branch 'master' into feature/UIMA-6283-Annotation-relation-predicates
add 35ce8bb [UIMA-6283] Annotation relation predicates
add bc4d317 Merge pull request #73 from apache/feature/UIMA-6283-Annotation-relation-predicates
add 3ca5530 [UIMA-6290] Clean up AnnotationIteratorTest
add 5016382 [UIMA-6290] Clean up AnnotationIteratorTest
add 8071a49 [UIMA-6290] Clean up AnnotationIteratorTest
add 2916509 [UIMA-6290] Clean up AnnotationIteratorTest
add fff5c8e [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument
add 506f2ca [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument
add bd66474 [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument
add 53e48c2 [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument
add 6cd24ed [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument
add 173f110 Merge pull request #81 from apache/bugfix/UIMA-6289-SelectFS-coveredBy-not-selecting-annotations-with-exact-same-bounds-as-annotation-argument
add 7267181 Merge branch 'master' into feature/UIMA-6290-Clean-up-AnnotationIteratorTest
add 099a2e0 Merge pull request #80 from apache/feature/UIMA-6290-Clean-up-AnnotationIteratorTest
add a175491 [UIMA-6290] Clean up AnnotationIteratorTest
add 99e9168 Merge pull request #82 from apache/feature/UIMA-6290-Clean-up-AnnotationIteratorTest
add 7c71ef1 [NO JIRA] Refactoring SelectFS tests
add cf73cf3 Merge pull request #83 from apache/feature/no-jira-refactoring-select-fs-tests
add d8ae851 [NO JIRA] Remove warning about two SLF4J backends when running tests.
add d031cce [UIMA-6294] SelectFS.at(annotation) does not return the correct result
add 6790428 [UIMA-6294] SelectFS.at(annotation) does not return the correct result
add 3e102f7 [UIMA-6294] SelectFS.at(annotation) does not return the correct result
add f239f41 Merge pull request #84 from apache/bugfix/UIMA-6294-SelectFS-at-annotation-does-not-return-the-correct-result
add c5238ae [NO JIRA] Remove Eclipse Maven Repo
add 6b08e58 Merge pull request #86 from apache/refactoring/NO-JIRA-Remove-Eclipse-Maven-Repo
add 18ebf33 Merge branch 'master' into bugfix/UIMA-6276-Potential-memory-leak-in-FSClassRegistry
No new revisions were added by this update.
Summary of changes:
.../annotation_predicates/annotation-relations.ods | Bin 0 -> 67477 bytes
.../annotation_predicates/annotation-relations.png | Bin 0 -> 328700 bytes
.../src/docbook/uv3.annotation_predicates.xml | 56 ++
.../src/docbook/version_3_users_guide.xml | 1 +
uimaj-core/pom.xml | 13 +-
.../main/java/org/apache/uima/cas/SelectFSs.java | 23 +-
.../org/apache/uima/cas/impl/FSClassRegistry.java | 4 +-
.../apache/uima/cas/impl/FsIndex_annotation.java | 9 +-
.../uima/cas/impl/FsIterator_set_sorted2.java | 9 +-
.../org/apache/uima/cas/impl/SelectFSs_impl.java | 51 +-
.../java/org/apache/uima/cas/impl/Subiterator.java | 256 ++++---
.../org/apache/uima/cas/impl/TypeSystemImpl.java | 45 ++
.../apache/uima/cas/text/AnnotationPredicates.java | 237 +++++++
.../org/apache/uima/jcas/cas/AnnotationBase.java | 2 +-
.../java/org/apache/uima/jcas/cas/FSArray.java | 16 +-
.../java/org/apache/uima/jcas/cas/FSArrayList.java | 2 +-
.../java/org/apache/uima/jcas/cas/FSHashSet.java | 2 +-
.../main/java/org/apache/uima/jcas/cas/Int2FS.java | 4 +-
.../org/apache/uima/jcas/cas/IntegerArrayList.java | 2 +-
.../org/apache/uima/jcas/cas/NonEmptyFSList.java | 4 +-
.../apache/uima/jcas/cas/NonEmptyFloatList.java | 4 +-
.../apache/uima/jcas/cas/NonEmptyIntegerList.java | 4 +-
.../apache/uima/jcas/cas/NonEmptyStringList.java | 4 +-
.../main/java/org/apache/uima/jcas/cas/Sofa.java | 12 +-
.../org/apache/uima/cas/impl/SelectFsAssert.java | 283 ++++++++
.../cas/impl/SelectFsPredicateAlignmentTest.java | 338 +++++++++
.../org/apache/uima/cas/impl/SelectFsTest.java | 760 ++++++++++++++++-----
.../uima/cas/test/AnnotationIteratorTest.java | 636 +++++++++--------
.../apache/uima/cas/test/JCasClassLoaderTest.java | 304 +++++++--
.../java/org/apache/uima/cas/test/SelectTest.java | 66 --
.../uima/cas/text/AnnotationPredicateAssert.java | 115 ++++
.../uima/cas/text/AnnotationPredicateTestData.java | 134 ++++
.../uima/cas/text/AnnotationPredicatesTest.java | 179 +++++
.../uima/jcas/impl/JCasCoverClassLoadingTest.java | 48 ++
.../uima/collection/impl/cpm/BaseCPMImpl.java | 2 +-
uimaj-parent/pom.xml | 17 +-
36 files changed, 2925 insertions(+), 717 deletions(-)
create mode 100644 uima-docbook-v3-users-guide/src/docbook/images/version_3_users_guide/annotation_predicates/annotation-relations.ods
create mode 100644 uima-docbook-v3-users-guide/src/docbook/images/version_3_users_guide/annotation_predicates/annotation-relations.png
create mode 100644 uima-docbook-v3-users-guide/src/docbook/uv3.annotation_predicates.xml
create mode 100644 uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationPredicates.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/impl/SelectFsAssert.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/impl/SelectFsPredicateAlignmentTest.java
delete mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/test/SelectTest.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/text/AnnotationPredicateAssert.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/text/AnnotationPredicateTestData.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/cas/text/AnnotationPredicatesTest.java
create mode 100644 uimaj-core/src/test/java/org/apache/uima/jcas/impl/JCasCoverClassLoadingTest.java