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Posted to github@arrow.apache.org by GitBox <gi...@apache.org> on 2022/03/28 15:58:49 UTC
[GitHub] [arrow] paleolimbot opened a new pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
paleolimbot opened a new pull request #12734:
URL: https://github.com/apache/arrow/pull/12734
Fixes the nightly build failures for rhub/fedora-clang-devel (github-test-r-linux-as-cran). (For example, https://github.com/ursacomputing/crossbow/runs/5713825093?check_suite_focus=true#step:5:3011). The gist of the problem is that `-stdlib=libc++` is in CXXFLAGS but not LDFLAGS.
@jonkeane I have no idea how to test to make sure this works!
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[GitHub] [arrow] ursabot edited a comment on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081212322
Benchmark runs are scheduled for baseline = 6a0770ccae33d471cf26d06f21b74bc0e7ef5b5d and contender = ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35. ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35 is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-xlarge-us-east-2](https://conbench.ursa.dev/compare/runs/d5348128d9ac43b29659dc97cbceeb4f...29af9846fb5d41d58b72f6c1c5ea48df/)
[Finished :arrow_down:0.34% :arrow_up:0.13%] [test-mac-arm](https://conbench.ursa.dev/compare/runs/439dd74ec37243f5bb8981be1bd336ce...25e9c90ee8e14e1399fb22a64510a613/)
[Failed :arrow_down:1.07% :arrow_up:0.0%] [ursa-i9-9960x](https://conbench.ursa.dev/compare/runs/ede0c1941d4f4897a7c73b4ad4945e8b...d48673cab775408594214e56f601c193/)
[Finished :arrow_down:0.34% :arrow_up:0.04%] [ursa-thinkcentre-m75q](https://conbench.ursa.dev/compare/runs/8551d59e4fb542948923d7714337b9ab...c417854a965f4c5c9151dfb2c1c0e36b/)
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python, R. Runs only benchmarks with cloud = True
test-mac-arm: Supported benchmark langs: C++, Python, R
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java
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[GitHub] [arrow] github-actions[bot] commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
github-actions[bot] commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081154227
Revision: c410f81952a4071ac499889330999b4a436aa612
Submitted crossbow builds: [ursacomputing/crossbow @ actions-1800](https://github.com/ursacomputing/crossbow/branches/all?query=actions-1800)
|Task|Status|
|----|------|
|test-r-linux-as-cran|[](https://github.com/ursacomputing/crossbow/actions?query=branch:actions-1800-github-test-r-linux-as-cran)|
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[GitHub] [arrow] ursabot edited a comment on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081212322
Benchmark runs are scheduled for baseline = 6a0770ccae33d471cf26d06f21b74bc0e7ef5b5d and contender = ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35. ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35 is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-xlarge-us-east-2](https://conbench.ursa.dev/compare/runs/d5348128d9ac43b29659dc97cbceeb4f...29af9846fb5d41d58b72f6c1c5ea48df/)
[Scheduled] [test-mac-arm](https://conbench.ursa.dev/compare/runs/439dd74ec37243f5bb8981be1bd336ce...25e9c90ee8e14e1399fb22a64510a613/)
[Scheduled] [ursa-i9-9960x](https://conbench.ursa.dev/compare/runs/ede0c1941d4f4897a7c73b4ad4945e8b...d48673cab775408594214e56f601c193/)
[Finished :arrow_down:0.34% :arrow_up:0.04%] [ursa-thinkcentre-m75q](https://conbench.ursa.dev/compare/runs/8551d59e4fb542948923d7714337b9ab...c417854a965f4c5c9151dfb2c1c0e36b/)
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python, R. Runs only benchmarks with cloud = True
test-mac-arm: Supported benchmark langs: C++, Python, R
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java
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[GitHub] [arrow] ursabot edited a comment on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081212322
Benchmark runs are scheduled for baseline = 6a0770ccae33d471cf26d06f21b74bc0e7ef5b5d and contender = ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35. ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35 is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-xlarge-us-east-2](https://conbench.ursa.dev/compare/runs/d5348128d9ac43b29659dc97cbceeb4f...29af9846fb5d41d58b72f6c1c5ea48df/)
[Scheduled] [test-mac-arm](https://conbench.ursa.dev/compare/runs/439dd74ec37243f5bb8981be1bd336ce...25e9c90ee8e14e1399fb22a64510a613/)
[Scheduled] [ursa-i9-9960x](https://conbench.ursa.dev/compare/runs/ede0c1941d4f4897a7c73b4ad4945e8b...d48673cab775408594214e56f601c193/)
[Scheduled] [ursa-thinkcentre-m75q](https://conbench.ursa.dev/compare/runs/8551d59e4fb542948923d7714337b9ab...c417854a965f4c5c9151dfb2c1c0e36b/)
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python, R. Runs only benchmarks with cloud = True
test-mac-arm: Supported benchmark langs: C++, Python, R
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java
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[GitHub] [arrow] jonkeane commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
jonkeane commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081087721
And locally, you can (inside of the arrow repo):
`R_ORG=rhub R_IMAGE=fedora-clang-devel R_tag=latest ARROW_R_DEV=FALSE docker-compose run -e ARROW_SOURCE_HOME='' r`
I found the env vars + flags from: https://github.com/apache/arrow/blob/d327f694d7cd6b5919fe1df7d9dea6e7ebef03e1/dev/tasks/r/github.linux.cran.yml#L37-L48
That uses the [`archery docker`](https://arrow.apache.org/docs/developers/continuous_integration/docker.html) runner on the last line, which is ~ the same as `docker-compose run` for the `r` service. For others (like ubuntu-r) the `archery docker` setup is _slightly_ nicer because it deals with dependent services.
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[GitHub] [arrow] jonkeane closed pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
jonkeane closed pull request #12734:
URL: https://github.com/apache/arrow/pull/12734
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[GitHub] [arrow] ursabot commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
ursabot commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081212322
Benchmark runs are scheduled for baseline = 6a0770ccae33d471cf26d06f21b74bc0e7ef5b5d and contender = ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35. ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35 is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Scheduled] [ec2-t3-xlarge-us-east-2](https://conbench.ursa.dev/compare/runs/d5348128d9ac43b29659dc97cbceeb4f...29af9846fb5d41d58b72f6c1c5ea48df/)
[Scheduled] [test-mac-arm](https://conbench.ursa.dev/compare/runs/439dd74ec37243f5bb8981be1bd336ce...25e9c90ee8e14e1399fb22a64510a613/)
[Scheduled] [ursa-i9-9960x](https://conbench.ursa.dev/compare/runs/ede0c1941d4f4897a7c73b4ad4945e8b...d48673cab775408594214e56f601c193/)
[Scheduled] [ursa-thinkcentre-m75q](https://conbench.ursa.dev/compare/runs/8551d59e4fb542948923d7714337b9ab...c417854a965f4c5c9151dfb2c1c0e36b/)
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python, R. Runs only benchmarks with cloud = True
test-mac-arm: Supported benchmark langs: C++, Python, R
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java
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[GitHub] [arrow] ursabot edited a comment on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081212322
Benchmark runs are scheduled for baseline = 6a0770ccae33d471cf26d06f21b74bc0e7ef5b5d and contender = ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35. ad7380e443de1f2a7becf597e0ee5f3b9c8f7f35 is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-xlarge-us-east-2](https://conbench.ursa.dev/compare/runs/d5348128d9ac43b29659dc97cbceeb4f...29af9846fb5d41d58b72f6c1c5ea48df/)
[Finished :arrow_down:0.34% :arrow_up:0.13%] [test-mac-arm](https://conbench.ursa.dev/compare/runs/439dd74ec37243f5bb8981be1bd336ce...25e9c90ee8e14e1399fb22a64510a613/)
[Scheduled] [ursa-i9-9960x](https://conbench.ursa.dev/compare/runs/ede0c1941d4f4897a7c73b4ad4945e8b...d48673cab775408594214e56f601c193/)
[Finished :arrow_down:0.34% :arrow_up:0.04%] [ursa-thinkcentre-m75q](https://conbench.ursa.dev/compare/runs/8551d59e4fb542948923d7714337b9ab...c417854a965f4c5c9151dfb2c1c0e36b/)
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python, R. Runs only benchmarks with cloud = True
test-mac-arm: Supported benchmark langs: C++, Python, R
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java
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[GitHub] [arrow] jonkeane commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
jonkeane commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081076103
@github-actions crossbow submit test-r-linux-as-cran
This will run the crossbow job (though that will likely be delayed as awe wait for github actions to catch up today)
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[GitHub] [arrow] nealrichardson commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
nealrichardson commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081055720
> @jonkeane I have no idea how to test to make sure this works!
You should be able to run this docker test locally, Jon can show you how
We may want to try upstreaming these fedora-clang-devel changes to r-hub again
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[GitHub] [arrow] github-actions[bot] commented on pull request #12734: ARROW-15857: [R] rhub/fedora-clang-devel fails to install 'sass' (rmarkdown dependency)
Posted by GitBox <gi...@apache.org>.
github-actions[bot] commented on pull request #12734:
URL: https://github.com/apache/arrow/pull/12734#issuecomment-1081078901
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