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Posted to dev@mahout.apache.org by "Deneche A. Hakim (Commented) (JIRA)" <ji...@apache.org> on 2011/12/18 17:14:30 UTC
[jira] [Commented] (MAHOUT-932) RandomForest quits with
ArrayIndexOutOfBoundsException while running sample
[ https://issues.apache.org/jira/browse/MAHOUT-932?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13171889#comment-13171889 ]
Deneche A. Hakim commented on MAHOUT-932:
-----------------------------------------
First, make sure you are using the latest trunk, they were many bug fixes since 0.5.
Then make sure to load the files that end with .arff and remove all the lines that start with @. The .txt files contain a supplemental field that makes the descriptor throw an exception (wrong number of attributes).
> RandomForest quits with ArrayIndexOutOfBoundsException while running sample
> ---------------------------------------------------------------------------
>
> Key: MAHOUT-932
> URL: https://issues.apache.org/jira/browse/MAHOUT-932
> Project: Mahout
> Issue Type: Bug
> Components: Classification
> Affects Versions: 0.6
> Environment: Mac OS X, current Mac OS shipped Java version, latest checkout from 17.12.2011
> Dual Core MacBook Pro 2009, 8 Gb, SSD
> Reporter: Berttenfall M.
> Priority: Minor
> Labels: Classifier, DecisionForest, RandomForest
>
> Hello,
> when running the example under https://cwiki.apache.org/MAHOUT/partial-implementation.html with the recommended data sets several issues occur.
> First: ARFF files seem no longer to be supported, I've been using the UCI format as recommended here (https://cwiki.apache.org/MAHOUT/breiman-example.html). Using ARFF files, Mahout quits when creating the description file (wrong number of attributes in the string), using UCI format it works.
> The main error happends during the BuildForest step (I could not test TestForest, due to missing tree).
> Running:
> $MAHOUT_HOME/bin/mahout org.apache.mahout.classifier.df.mapreduce.BuildForest -Dmapred.max.split.size=1874231 -d convertedData/data.data -ds KDDTrain+.info -sl 5 -p -t 100 -o nsl-forest.
> I tested different split.size values. 1874231, 187423, 18742 give the following error. 1874 does not finish on my machine (Dual Core MacBook Pro 2009, 8 Gb, SSD).
> It quits after a while (map is almost done) with the following message:
> 11/12/17 16:23:24 INFO mapred.Task: Task 'attempt_local_0001_m_000998_0' done.
> 11/12/17 16:23:24 INFO mapred.Task: Task:attempt_local_0001_m_000999_0 is done. And is in the process of commiting
> 11/12/17 16:23:24 INFO mapred.LocalJobRunner:
> 11/12/17 16:23:24 INFO mapred.Task: Task attempt_local_0001_m_000999_0 is allowed to commit now
> 11/12/17 16:23:24 INFO output.FileOutputCommitter: Saved output of task 'attempt_local_0001_m_000999_0' to file:/Users/martin/Documents/Studium/Master/LargeScaleProcessing/Repository/mahout_algorithms_evaluation/testingRandomForests/nsl-forest
> 11/12/17 16:23:27 INFO mapred.LocalJobRunner:
> 11/12/17 16:23:27 INFO mapred.Task: Task 'attempt_local_0001_m_000999_0' done.
> 11/12/17 16:23:28 INFO mapred.JobClient: map 100% reduce 0%
> 11/12/17 16:23:28 INFO mapred.JobClient: Job complete: job_local_0001
> 11/12/17 16:23:28 INFO mapred.JobClient: Counters: 8
> 11/12/17 16:23:28 INFO mapred.JobClient: File Output Format Counters
> 11/12/17 16:23:28 INFO mapred.JobClient: Bytes Written=41869032
> 11/12/17 16:23:28 INFO mapred.JobClient: FileSystemCounters
> 11/12/17 16:23:28 INFO mapred.JobClient: FILE_BYTES_READ=37443033225
> 11/12/17 16:23:28 INFO mapred.JobClient: FILE_BYTES_WRITTEN=44946910704
> 11/12/17 16:23:28 INFO mapred.JobClient: File Input Format Counters
> 11/12/17 16:23:28 INFO mapred.JobClient: Bytes Read=20478569
> 11/12/17 16:23:28 INFO mapred.JobClient: Map-Reduce Framework
> 11/12/17 16:23:28 INFO mapred.JobClient: Map input records=125973
> 11/12/17 16:23:28 INFO mapred.JobClient: Spilled Records=0
> 11/12/17 16:23:28 INFO mapred.JobClient: Map output records=100000
> 11/12/17 16:23:28 INFO mapred.JobClient: SPLIT_RAW_BYTES=215000
> Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 100
> at org.apache.mahout.classifier.df.mapreduce.partial.PartialBuilder.processOutput(PartialBuilder.java:126)
> at org.apache.mahout.classifier.df.mapreduce.partial.PartialBuilder.parseOutput(PartialBuilder.java:89)
> at org.apache.mahout.classifier.df.mapreduce.Builder.build(Builder.java:303)
> at org.apache.mahout.classifier.df.mapreduce.BuildForest.buildForest(BuildForest.java:201)
> at org.apache.mahout.classifier.df.mapreduce.BuildForest.run(BuildForest.java:163)
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:65)
> at org.apache.mahout.classifier.df.mapreduce.BuildForest.main(BuildForest.java:225)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:597)
> at org.apache.hadoop.util.ProgramDriver$ProgramDescription.invoke(ProgramDriver.java:68)
> at org.apache.hadoop.util.ProgramDriver.driver(ProgramDriver.java:139)
> at org.apache.mahout.driver.MahoutDriver.main(MahoutDriver.java:188)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:597)
> at org.apache.hadoop.util.RunJar.main(RunJar.java:156)
> PS: I adjusted the class to .classifier.df. and removed -oop
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