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Posted to commits@beam.apache.org by "Eugene Kirpichov (JIRA)" <ji...@apache.org> on 2017/08/18 18:21:00 UTC

[jira] [Commented] (BEAM-2774) Add I/O source for VCF files (python)

    [ https://issues.apache.org/jira/browse/BEAM-2774?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16133395#comment-16133395 ] 

Eugene Kirpichov commented on BEAM-2774:
----------------------------------------

Related issue: https://issues.apache.org/jira/browse/BEAM-2776

> Add I/O source for VCF files (python)
> -------------------------------------
>
>                 Key: BEAM-2774
>                 URL: https://issues.apache.org/jira/browse/BEAM-2774
>             Project: Beam
>          Issue Type: New Feature
>          Components: sdk-py
>            Reporter: Asha Rostamianfar
>            Assignee: Asha Rostamianfar
>   Original Estimate: 336h
>  Remaining Estimate: 336h
>
> A new I/O source for reading (and eventually writing) VCF files [1] for Python. The design doc is available at https://docs.google.com/document/d/1jsdxOPALYYlhnww2NLURS8NKXaFyRSJrcGbEDpY9Lkw/edit
> [1] http://samtools.github.io/hts-specs/VCFv4.3.pdf



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