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Posted to dev@climate.apache.org by "Mattmann, Chris A (3980)" <ch...@jpl.nasa.gov> on 2014/06/01 18:42:46 UTC
Re: failed to run rcmes following the step-by-step document
Hi Rashyd,
I'm CC'ing the Apache list for the Open Climate Workbench project where
we have a lot of eyes on the list. Maybe someone on the Apache list can
help as well.
Also we are happy to have a Skype/telecon with you this week to get
your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
work with Rashyd to get his problem fixed.
Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
Paul help out on this - they'll take it from here.
Cheers,
Chris
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: Rashyd ZAABOUL <za...@gmail.com>
Date: Sunday, June 1, 2014 2:31 AM
To: "Kim, Jinwon (329M-Affiliate)" <jk...@atmos.ucla.edu>
Cc: "sanjay@tropmet.res.in" <sa...@tropmet.res.in>,
"ramarao@tropmet.res.in" <ra...@tropmet.res.in>, "Joyce, Michael J
(398J)" <Mi...@jpl.nasa.gov>, rcmes-dev
<rc...@jpl.nasa.gov>, "Goodale, Cameron E (398J)"
<ca...@jpl.nasa.gov>
Subject: Re: failed to run rcmes following the step-by-step document
>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>contains params = db.getParams() on line 194 !!!
>
>
>I've tried this tar file which is equal to the previous one (I've
>modified the line 194 in rcmet.py) and I've got the same error:
>
>
>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>
>
>
>Regards
>Rashyd
>
>
>
>2014-06-01 11:26 GMT+04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
>
>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>tar file again. Please check this one out. Please clean up previous
>versions and try the attached one with the included config file
>(cordexMENA.cfg). This is the code/config file I used
> to create the figures I sent in the earlier e-mail.
>
>For your error messages:
>
>(1) The parameter "obsSource" directs the code where to find observation
>data for evaluation. "obsSource=1" is reserved for the case users provide
>their own observation data. If you set obsSource=1 and do not provide
>data, it will result in error exit as the
> code cannot find the observation data file(s) specified by the user.
>Thus, unless you provide your own observation data, obsSource=1 must not
>be used.
>
>(2) The exit message "No input observation data file. EXIT" occurs when
>there is no observation data file id's are assigned when obsSource=0 is
>set. This can happen if "obsParamId" in the config file is not properly
>set. We don't expect any problems if obsParamId
> is correctly set because the data specified by obsParamId are included
>in the database (this requires active internet connection). Will you send
>me your configure file so that I can look at it?
>
>
>
>
>Thanks for your patience.
>
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com]
>
>Sent: Saturday, May 31, 2014 11:58 PM
>To: Kim, Jinwon
>Cc: sanjay@tropmet.res.in;
>ramarao@tropmet.res.in <ma...@tropmet.res.in>; Joyce, Michael J
>(398J); rcmes-dev;
>cameron.e.goodale@jpl.nasa.gov <ma...@jpl.nasa.gov>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>
>Hi Kim,
>
>Thank you for your help. I'm sorry but I'm getting confused with all
>these different packages I received from you and your colleagues!. The
>last one you just sent to me still contains params = db.getParams() in
>rcmet.py at line 194. I've replaced this file
> with the one sent by Cameron before and it seems to be ok. But when I've
>tried to reproduce the result you sent to me (with obsSource=1) I got
>this error :
>
>...
>data_prep is completed: both obs and mdl data are re-gridded to a common
>analysis grid
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>Do you know how can I fix this please?
>
>NOTE: with obsSource=0 I got :
>No input observation data file. EXIT
>
>Thanks and regards
>Rashyd
>
>
>
>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>:
>To all,
>
>*** Please update your RCMET with the attached version 2.1.3. ***
>
>I found that some files included in the earlier tar file for the release
>version 2.1.3 have some critical issues. Now I've applied all fixes and
>successfully ran a test case with a MENA domain dataset; the version
>works properly now. I apologize for inconvenience.
>
>Rashyd:
>Please see the two attached figures for the MENA domain (model bias, GPCP
>climatology for 1991-2000 over the MENA domain) for your reference. The
>configure file for this processing is:
>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>domain has been adjusted to fit the MENA domain.
>
>
>Aanjay and Rama:
>The code also works fine with the India domain. The two attached figures
>for the India domain shows the TRMM climatology for 98-2000 and the bias
>of model ensemble against TRMM for the same period. The sample configure
>file is: cordexIndia.cfg under resources/
> (the same location as the MENA config file).
>
>Please contact me/mike/rcmes-dev if you have any questions.
>
>
>With best regards,
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>
>Sent: Thursday, May 29, 2014 12:07 AM
>To: Kim, Jinwon
>Cc: Joyce, Michael J (398J); rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>The package you've just sent to me contains the same rcmet.py as the
>package 2.1.2 and has on line 194 :
> params = db.getParams()
>
>Is it the right one? Because I'm still having the same error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>I've attached one of the files that I'm trying to use.
>
>Thanks again
>Rashyd
>
>
>
>
>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>>>:
>Here comes the attachment.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu
><ma...@atmos.ucla.edu>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>>]
>
>Sent: Wednesday, May 28, 2014 10:27 PM
>To: Joyce, Michael J (398J)
>Cc: Kim, Jinwon; rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>
>With the new Jinwon's RCMET version 2.1.3 I got this error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>My
>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rcm
>es
>
>I'm using files for precipitation exactly as I download them from ESGF
>portal for CORDEX MENA domain. The files I'm using are :
>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>198012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>199012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>200012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>200512.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-198012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-199012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-200012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-200512
>.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-1
>98012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-1
>99012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-2
>00012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-2
>00512.nc
>
>
>Do I have to pre-process this data first before I can use it with RCMET ?
>
>I've attached my config file to check if I'm missing something.
>
>Thanks for your help
>
>Rashyd
>
>
>
>
>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:M
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>:
>Hi Rashyd,
>
>It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
>released a newer version that may resolve some of your problems. You can
>find and download it at [1]. I¹m sure Jinwon will be able to help you get
>this resolved. Thank you for sending the
> document you used. I¹ll be sure to get it and the website updated with
>the correct information.
>
>[1]
>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>
>Thanks much!
>
>--
>Michael J. Joyce
>Engineering Applications Software Engineer
>Instrument Software and Science Data Systems
>NASA Jet Propulsion Laboratory
>California Institute of Technology
>4800 Oak Grove Drive
>Pasadena, California 91109
>Mail Stop: 158-242
>Tel: (818) 354-7550
>Fax: (818) 393-1370
>
>
>
>From: Rashyd ZAABOUL
><za...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>><ma...@gmail.com><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>>
>Date: Wednesday, May 28, 2014 at 5:09 AM
>
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmo
>s.ucla.edu><ma...@atmos.ucla.edu>>>>
>Cc: rcmes-dev
><rc...@jpl.nasa.gov><mailto:rcmes-dev@jp
>l.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov<m
>ailto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-d
>ev@jpl.nasa.gov>>>>,
> JPL
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:M
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Jim and Michael,
>
>I've modified the script
>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>json.loads function by simplejson.loads one to get more details on the
>error and this is what I got :
>
>Running using config file: ../rcmes/resources/mena.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>line 27, in getParams
> paramDict = simplejson.loads(httpRequest.text)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> return _default_decoder.decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> obj, end = self.raw_decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> return self.scan_once(s, idx=_w(s, idx).end())
>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>(char 0)
>
>What does this error mean ? I'm afraid the database RCMED is down while
>I'm trying to get data out of it !
>
>Best regards
>Rashyd
>
>
>
>
>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmo
>s.ucla.edu><ma...@atmos.ucla.edu>>>>:
>Thanks for your interests.
>
>For organizing your data:
>
>You can put your model data in your own directory. Then specify the link
>to the data (or data files) in the configure file, [MODEL] block. The
>code currently takes netcdf format files for input.
>
>If you use the observed data in the RCMES database, just specify the
>parameter numbers in the [RCMED] block, also in the configure file. If
>you use your own observation data, you can specify it in the same block
>(it also takes netcdf-format files).
>
>Hope this helps.
>
>
>With best regards,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu
><ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos
>.ucla.edu><ma...@atmos.ucla.edu>>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>><ma...@gmail.com><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>]
>Sent: Tuesday, May 27, 2014 7:59 AM
>
>To:
>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl
>.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov<ma
>ilto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-de
>v@jpl.nasa.gov>>>
>Subject: failed to run rcmes following the step-by-step document
>
>Hi
>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>TRMM ... I followed the step-by-step document but it seems that something
>is missing there. For example it doesn't tell how to organize my data?
>where to put the observations ...
>
>Could you please provide me with any useful documentation that can help
>me setup RCMES to evaluate those models?
>
>Thanks
>Rashyd
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul@biosali
>ne.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.or
>g.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.org.ae
><ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mail
>to:r.zaaboul@biosaline.org.ae>>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
>
>
>
>
>
>
>
>
>--
>Rashyd Zaaboul
>
>Climate and Water Modeling Scientist
>
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae
>
>Please consider the environment before printing this e-mail
>
>
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
Thanks for taking care of this problem.
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: sigep311@gmail.com [sigep311@gmail.com] on behalf of Cameron Goodale [goodale@apache.org]
Sent: Monday, June 16, 2014 6:26 AM
To: dev@climate.apache.org
Subject: Re: failed to run rcmes following the step-by-step document
Rashyd,
You are correct that the RCMED was being called regardless of what the obsSource value was set to.
I have moved the code around a little bit and attached it here.
This updated copy should function properly without an internet connection to the RCMED required.
Best Regards,
Cameron
On Sun, Jun 15, 2014 at 9:53 PM, Rashyd ZAABOUL <za...@gmail.com>> wrote:
Hi all,
I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When the laptop is connected to internet it works but if I disconnect it and try to run rcmet again it gives this message:
Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
Traceback (most recent call last):
File "rcmet.py", line 299, in <module>
runUsingConfig(args.CONFIG)
File "rcmet.py", line 194, in runUsingConfig
params = db.get_parameters_metadata()
File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line 45, in get_parameters_metadata
string = urllib2.urlopen(url)
File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
response = self._open(req, data)
File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
'_open', req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
return self.do_open(httplib.HTTPConnection, req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
raise URLError(err)
urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
So why it's trying to connect to RCMED if my obsSource=1 ?
I've attached my rcmet.py
Thanks and regards
Rashyd
2014-06-03 1:16 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>>:
It's really nice to hear that it's useful for your research.
With best regards,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828<tel:310-206-2828>
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
Sent: Monday, June 02, 2014 10:08 PM
To: Mattmann, Chris A (3980)
Cc: Kim, Jinwon; sanjay@tropmet.res.in<ma...@tropmet.res.in>; ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Thank you Chris and many thanks to all your colleagues for their help. It's very useful tool and I keep sending requests to the mailing lists you mentioned.
Kim, I'll look at the code and try to use the function calc_pdf.
Thanks and best regards
Rashyd
2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <ch...@jpl.nasa.gov>>>:
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to dev@climate.apache.org<ma...@climate.apache.org>> and
including the mailing list as it really helps to show the activity
going on.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <za...@gmail.com>>>
Cc: Chris Mattmann <Ch...@jpl.nasa.gov>>>,
"sanjay@tropmet.res.in<ma...@tropmet.res.in>>" <sa...@tropmet.res.in>>>, "ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
<ra...@tropmet.res.in>>>, "Joyce, Michael J (398J)"
<Mi...@jpl.nasa.gov>>>, rcmes-dev <rc...@jpl.nasa.gov>>>,
"Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>>>,
"dev@climate.apache.org<ma...@climate.apache.org>>" <de...@climate.apache.org>>>, "Mcgibbney, Lewis J
(398J)" <Le...@jpl.nasa.gov>>>
Subject: RE: failed to run rcmes following the step-by-step document
>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828<tel:310-206-2828>
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J (398J); rcmes-dev; Goodale,
>Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828<tel:310-206-2828>
>________________________________________
>From: Mattmann, Chris A (3980)
>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>>>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL <za...@gmail.com>>>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu>>>>
>Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>>>"
><sa...@tropmet.res.in>>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in>>>"
><ra...@tropmet.res.in>>>>, "Joyce, Michael J
>(398J)"
><Mi...@jpl.nasa.gov>>>>,
>rcmes-dev
><rc...@jpl.nasa.gov>>>>, "Goodale,
>Cameron E (398J)"
><ca...@jpl.nasa.gov>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu>>>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>
>><ma...@tropmet.res.in>>>>; Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>><ma...@jpl.nasa>>.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atmos.ucla.edu>>>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atmos.ucla.edu>>>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>> params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atmos.ucla.edu>>>>>;
>> 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc><http://198012.nc><http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc><http://199012.nc><http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc><http://200012.nc><http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc><http://200512.nc><http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc><http://98012.nc><http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc><http://99012.nc><http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc><http://00012.nc><http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc><http://00512.nc><http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>:
>>Hi Rashyd,
>>
>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I^1m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I^1ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550<tel:%28818%29%20354-7550>
>>Fax: (818) 393-1370<tel:%28818%29%20393-1370>
>>
>>
>>
>>From: Rashyd ZAABOUL
>><za...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>
>>Cc: rcmes-dev
>><rc...@j>>
>>pl.nasa.gov<ht...@jp>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jp>
>>l.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-<mailto:rcmes-><mailto:rcmes-<mailto:rcmes->>
>>dev@jpl.nasa.gov<ma...@jpl.na>>
>>sa.gov<http://sa.gov><http://sa.gov>><m
>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mail
>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-d<mailto:rcmes-d><mailto:rcmes-d<mailto:rcmes-d>><m
>>ailto:rcmes-d>
>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>,
>> JPL
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>> paramDict = simplejson.loads(httpRequest.text)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> return _default_decoder.decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> obj, end = self.raw_decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atm>>
>>os.ucla.edu<ht...@atm>>
>>os>
>>.ucla.edu<ht...@atmos>>.
>>ucla.edu<ht...@atmos.ucla.edu>>>>>>;
>> 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>rcmes-dev@jpl.nasa.gov<ma...@jp>>
>>l.nasa.gov<ht...@jpl>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jpl>
>>.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-dev<mailto:rcmes-dev><mailto:rcmes-dev<mailto:rcmes-dev>>
>>@jpl.nasa.gov<ht...@jpl.nasa>>.
>>gov><ma
>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-de<mailto:rcmes-de><mailto:rcmes-de<mailto:rcmes-de>><ma
>>ilto:rcmes-de>
>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>Office : +971 4 336 1100 x 259<tel:%2B971%204%20336%201100%20x%20259>
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosali>><mailto:r.zaabou<mailto:r.zaabou><mailto:r.zaabou<mailto:r.zaabou>>
>>l@biosali>
>>ne.org.ae<ht...@biosaline.org.ae>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@b>>
>>iosaline.or>
>>g.ae<ht...@bios>>
>>aline.org.ae<ht...@biosal>>
>>ine.org.ae<http://ine.org.ae><http://ine.org.ae>>
>><ma...@biosaline.org.ae>>>><ma
>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mail
>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
Please consider the environment before printing this e-mail
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
Thanks.
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: Goodale, Cameron E (398J) [cameron.e.goodale@jpl.nasa.gov]
Sent: Monday, June 16, 2014 9:18 AM
To: rcmes-dev
Cc: dev@climate.apache.org
Subject: Re: failed to run rcmes following the step-by-step document
Hey Jinwon,
Within the OCW library RCMED is only invoked if the user invokes it using
ocw.data_source.rcmed.py.
I believe the code that will replace your Question/Answer based program
will be the Command Line Interface that Mazi is working on and will be
pushing to the OCW repository.
I hope that Mazi will isolate the RCMED accessing logic into a section of
his program that is active once a user requests RCMED data and not before.
Best Regards,
Cameron
On 6/16/14 8:11 AM, "Kim, Jinwon" <jk...@atmos.ucla.edu> wrote:
>Hi Cam,
>
>Thanks for providing the patch. Is this be a permanent fix to this
>problem that can be included in the next OCW version?
>
>
>Cheers,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu; 310-206-2828
>________________________________________
>From: sigep311@gmail.com [sigep311@gmail.com] on behalf of Cameron
>Goodale [goodale@apache.org]
>Sent: Monday, June 16, 2014 6:26 AM
>To: dev@climate.apache.org
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Rashyd,
>
>You are correct that the RCMED was being called regardless of what the
>obsSource value was set to.
>
>I have moved the code around a little bit and attached it here.
>
>This updated copy should function properly without an internet connection
>to the RCMED required.
>
>Best Regards,
>
>
>Cameron
>
>
>On Sun, Jun 15, 2014 at 9:53 PM, Rashyd ZAABOUL
><za...@gmail.com>> wrote:
>Hi all,
>
>I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When
>the laptop is connected to internet it works but if I disconnect it and
>try to run rcmet again it gives this message:
>
>Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.get_parameters_metadata()
> File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line
>45, in get_parameters_metadata
> string = urllib2.urlopen(url)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
> return _opener.open(url, data, timeout)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
> response = self._open(req, data)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
> '_open', req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
> result = func(*args)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
> return self.do_open(httplib.HTTPConnection, req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
> raise URLError(err)
>urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
>
>
>So why it's trying to connect to RCMED if my obsSource=1 ?
>I've attached my rcmet.py
>
>Thanks and regards
>Rashyd
>
>
>2014-06-03 1:16 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>:
>It's really nice to hear that it's useful for your research.
>
>With best regards,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>;
>310-206-2828<tel:310-206-2828>
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>Sent: Monday, June 02, 2014 10:08 PM
>To: Mattmann, Chris A (3980)
>Cc: Kim, Jinwon; sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Thank you Chris and many thanks to all your colleagues for their help.
>It's very useful tool and I keep sending requests to the mailing lists
>you mentioned.
>
>Kim, I'll look at the code and try to use the function calc_pdf.
>
>Thanks and best regards
>Rashyd
>
>
>2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980)
><ch...@jpl.nasa.gov><mailt
>o:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>:
>Thanks Guys. Rashyd, I just wanted to let you know to feel free to
>keep sending any questions you have to
>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.a
>pache.org<ma...@climate.apache.org>> and
>including the mailing list as it really helps to show the activity
>going on.
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email:
>chris.a.mattmann@nasa.gov<ma...@nasa.gov><mailto:chris.a
>.mattmann@nasa.gov<ma...@nasa.gov>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: <Kim>, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>>>
>Date: Monday, June 2, 2014 7:56 AM
>To: Rashyd ZAABOUL
><za...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>>>
>Cc: Chris Mattmann
><Ch...@jpl.nasa.gov><mailt
>o:Chris.A.Mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>,
>"sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>.res.in<ma...@tropmet.res.in>>"
><sa...@tropmet.res.in><mailto:sanjay@tropmet
>.res.in<ma...@tropmet.res.in>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>met.res.in<ma...@tropmet.res.in>>"
><ra...@tropmet.res.in><mailto:ramarao@trop
>met.res.in<ma...@tropmet.res.in>>>, "Joyce, Michael J (398J)"
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>,
>rcmes-dev
><rc...@jpl.nasa.gov><mailto:rcmes-dev@jp
>l.nasa.gov<ma...@jpl.nasa.gov>>>,
>"Goodale, Cameron E (398J)"
><ca...@jpl.nasa.gov><mai
>lto:cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>
>>,
>"dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>apache.org<ma...@climate.apache.org>>"
><de...@climate.apache.org><mailto:dev@climate.
>apache.org<ma...@climate.apache.org>>>, "Mcgibbney, Lewis J
>(398J)"
><Le...@jpl.nasa.gov><mai
>lto:Lewis.J.Mcgibbney@jpl.nasa.gov<ma...@jpl.nasa.gov>>
>>
>Subject: RE: failed to run rcmes following the step-by-step document
>
>>Glad to hear it works.
>>
>>pdf calculation is not included in the metrics menu at this time, but a
>>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>>(e.g., model and observations) is available in the code. the routine is:
>>'calc_pdf' in the code
>>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>>
>>to access/modify,
>>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>>(2) edit the file 'metrics.py' using an editor, for example, "vi
>>metrics.py",
>>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>>
>>if you are familiar with python, you may be able to use that routine to
>>create an option to calculate pdf's (and cdf's). if you are not familiar
>>with python, we can add it to the next release, but will take a few
>>weeks.
>>
>>
>>Hope this is helpful.
>>
>>
>>Best,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>>]
>>Sent: Monday, June 02, 2014 3:50 AM
>>To: Kim, Jinwon
>>Cc: Mattmann, Chris A (3980);
>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>>.res.in<ma...@tropmet.res.in>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>>met.res.in<ma...@tropmet.res.in>>; Joyce, Michael J (398J);
>>rcmes-dev; Goodale,
>>Cameron E (398J);
>>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>>apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J (398J)
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi all,
>>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>>... Now I've two questions :
>>- Is it possible to compute PDFs and CDFs and other metrics?
>>- Is it possible to compute these metrics on other parameters such as 2m
>>temperature, 500mb height, wind at different levels to compare with
>>reanalysis for example?
>>
>>Best regards
>>Rashyd
>>
>>
>>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@at
>>mos.ucla.edu><ma...@atmos.ucla.edu>>>>:
>>The problem was the correct rcmet.py was not copied to
>>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>>will resolve this problem. I've always run rcmet from
>>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until
>>today.
>>
>>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu><ma...@atmos.ucla.edu>>>;
>>310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Mattmann, Chris A (3980)
>>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov><mail
>>to:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>><m
>>ailto:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>
>><mailto:chris.a.mattmann@jpl.nasa.gov<mailto:chris.a.mattmann@jpl.nasa.go
>>v>>>]
>>Sent: Sunday, June 01, 2014 9:43 AM
>>To: Rashyd ZAABOUL; Kim, Jinwon
>>Cc:
>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>>.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mailt
>>o:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@tropm
>>et.res.in>>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>>met.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in<
>>mailto:ramarao@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:ramar
>>ao@tropmet.res.in>>>; Joyce, Michael J
>>(398J); rcmes-dev; Goodale, Cameron E (398J);
>>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>>apache.org<ma...@climate.apache.org>><mailto:dev@climate.apache.org<
>>mailto:dev@climate.apache.org><mailto:dev@climate.apache.org<mailto:dev@c
>>limate.apache.org>>>; Mcgibbney, Lewis J
>>(398J)
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Rashyd,
>>
>>I'm CC'ing the Apache list for the Open Climate Workbench project where
>>we have a lot of eyes on the list. Maybe someone on the Apache list can
>>help as well.
>>
>>Also we are happy to have a Skype/telecon with you this week to get
>>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>>work with Rashyd to get his problem fixed.
>>
>>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>>Paul help out on this - they'll take it from here.
>>
>>Cheers,
>>Chris
>>
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>Chris Mattmann, Ph.D.
>>Chief Architect
>>Instrument Software and Science Data Systems Section (398)
>>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>>Office: 168-519, Mailstop: 168-5th floor
>>Email:
>>chris.a.mattmann@nasa.gov<ma...@nasa.gov><mailto:chris.
>>a.mattmann@nasa.gov<ma...@nasa.gov>><mailto:chris.a.mat
>>tmann@nasa.gov<ma...@nasa.gov><mailto:chris.a.mattmann@
>>nasa.gov<ma...@nasa.gov>>>
>>WWW: http://sunset.usc.edu/~mattmann/
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>Adjunct Associate Professor, Computer Science Department
>>University of Southern California, Los Angeles, CA 90089 USA
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>
>>
>>
>>
>>
>>
>>-----Original Message-----
>>From: Rashyd ZAABOUL
>><za...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>>><ma...@gmail.com>>>>
>>Date: Sunday, June 1, 2014 2:31 AM
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@at
>>mos.ucla.edu><ma...@atmos.ucla.edu>>>>
>>Cc:
>>"sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropme
>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mail
>>to:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@trop
>>met.res.in>>>"
>><sa...@tropmet.res.in><mailto:sanjay@tropme
>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mail
>>to:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@trop
>>met.res.in>>>>,
>>"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@tro
>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in
>><ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:rama
>>rao@tropmet.res.in>>>"
>><ra...@tropmet.res.in><mailto:ramarao@tro
>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in
>><ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:rama
>>rao@tropmet.res.in>>>>, "Joyce, Michael J
>>(398J)"
>><Mi...@jpl.nasa.gov><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailt
>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>,
>>rcmes-dev
>><rc...@jpl.nasa.gov><mailto:rcmes-dev@j
>>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov
>><ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcme
>>s-dev@jpl.nasa.gov>>>>, "Goodale,
>>Cameron E (398J)"
>><ca...@jpl.nasa.gov><ma
>>ilto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
>>>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nas
>>>>a.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@j
>>>>pl.nasa.gov>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>>contains params = db.getParams() on line 194 !!!
>>>
>>>
>>>I've tried this tar file which is equal to the previous one (I've
>>>modified the line 194 in rcmet.py) and I've got the same error:
>>>
>>>
>>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>>
>>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,ob
>>>s
>>>L
>>>atName,obsTimeName,obsTimestep,gridBox,models)
>>>ValueError: too many values to unpack
>>>
>>>
>>>
>>>
>>>Regards
>>>Rashyd
>>>
>>>
>>>
>>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>>>:
>>>
>>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>>tar file again. Please check this one out. Please clean up previous
>>>versions and try the attached one with the included config file
>>>(cordexMENA.cfg). This is the code/config file I used
>>> to create the figures I sent in the earlier e-mail.
>>>
>>>For your error messages:
>>>
>>>(1) The parameter "obsSource" directs the code where to find observation
>>>data for evaluation. "obsSource=1" is reserved for the case users
>>>provide
>>>their own observation data. If you set obsSource=1 and do not provide
>>>data, it will result in error exit as the
>>> code cannot find the observation data file(s) specified by the user.
>>>Thus, unless you provide your own observation data, obsSource=1 must not
>>>be used.
>>>
>>>(2) The exit message "No input observation data file. EXIT" occurs when
>>>there is no observation data file id's are assigned when obsSource=0 is
>>>set. This can happen if "obsParamId" in the config file is not properly
>>>set. We don't expect any problems if obsParamId
>>> is correctly set because the data specified by obsParamId are included
>>>in the database (this requires active internet connection). Will you
>>>send
>>>me your configure file so that I can look at it?
>>>
>>>
>>>
>>>
>>>Thanks for your patience.
>>>
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>>]
>>>
>>>Sent: Saturday, May 31, 2014 11:58 PM
>>>To: Kim, Jinwon
>>>Cc:
>>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropme
>>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mai
>>>lto:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@tr
>>>opmet.res.in>>>;
>>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@tro
>>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.i
>>>n<ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:ra
>>>marao@tropmet.res.in>>>
>>><ma...@tropmet.res.in><mailto:ram
>>>arao@tropmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropm
>>>et.res.in<ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<m
>>>ailto:ramarao@tropmet.res.in>>>>; Joyce,
>>>Michael J
>>>(398J); rcmes-dev;
>>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.go
>>>v>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.n
>>>asa.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@
>>>jpl.nasa.gov>>>
>>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa
>>>.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl
>>>.nasa.gov>><mailto:cameron.e.goodale@jpl.nasa<mailto:cameron.e.goodale@j
>>>pl.nasa><mailto:cameron.e.goodale@jpl.nasa<mailto:cameron.e.goodale@jpl.
>>>nasa>>.
>>>gov>>
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>
>>>Hi Kim,
>>>
>>>Thank you for your help. I'm sorry but I'm getting confused with all
>>>these different packages I received from you and your colleagues!. The
>>>last one you just sent to me still contains params = db.getParams() in
>>>rcmet.py at line 194. I've replaced this file
>>> with the one sent by Cameron before and it seems to be ok. But when
>>>I've
>>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>>this error :
>>>
>>>...
>>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>>analysis grid
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 237, in runUsingConfig
>>>
>>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,ob
>>>s
>>>L
>>>atName,obsTimeName,obsTimestep,gridBox,models)
>>>ValueError: too many values to unpack
>>>
>>>Do you know how can I fix this please?
>>>
>>>NOTE: with obsSource=0 I got :
>>>No input observation data file. EXIT
>>>
>>>Thanks and regards
>>>Rashyd
>>>
>>>
>>>
>>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>>>:
>>>To all,
>>>
>>>*** Please update your RCMET with the attached version 2.1.3. ***
>>>
>>>I found that some files included in the earlier tar file for the release
>>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>>successfully ran a test case with a MENA domain dataset; the version
>>>works properly now. I apologize for inconvenience.
>>>
>>>Rashyd:
>>>Please see the two attached figures for the MENA domain (model bias,
>>>GPCP
>>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>>configure file for this processing is:
>>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>>domain has been adjusted to fit the MENA domain.
>>>
>>>
>>>Aanjay and Rama:
>>>The code also works fine with the India domain. The two attached figures
>>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>>of model ensemble against TRMM for the same period. The sample configure
>>>file is: cordexIndia.cfg under resources/
>>> (the same location as the MENA config file).
>>>
>>>Please contact me/mike/rcmes-dev if you have any questions.
>>>
>>>
>>>With best regards,
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>>;
>>>310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>>]
>>>
>>>Sent: Thursday, May 29, 2014 12:07 AM
>>>To: Kim, Jinwon
>>>Cc: Joyce, Michael J (398J); rcmes-dev
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Michael,
>>>The package you've just sent to me contains the same rcmet.py as the
>>>package 2.1.2 and has on line 194 :
>>> params = db.getParams()
>>>
>>>Is it the right one? Because I'm still having the same error :
>>>
>>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>>AttributeError: 'module' object has no attribute 'getParams'
>>>
>>>I've attached one of the files that I'm trying to use.
>>>
>>>Thanks again
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>>>:
>>>Here comes the attachment.
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.edu<ma
>>>ilto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.u
>>>cla.edu>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>>><ma...@atmos.ucla.edu><mailto:jkim@atmo
>>>s.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailt
>>>o:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla
>>>.edu>>>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>>]
>>>
>>>Sent: Wednesday, May 28, 2014 10:27 PM
>>>To: Joyce, Michael J (398J)
>>>Cc: Kim, Jinwon; rcmes-dev
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Michael,
>>>
>>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>>
>>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>>AttributeError: 'module' object has no attribute 'getParams'
>>>
>>>My
>>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/r
>>>c
>>>m
>>>es
>>>
>>>I'm using files for precipitation exactly as I download them from ESGF
>>>portal for CORDEX MENA domain. The files I'm using are :
>>>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19710
>>>1
>>>-
>>>198012.nc<http://198012.nc><http://198012.nc><http://198012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19810
>>>1
>>>-
>>>199012.nc<http://199012.nc><http://199012.nc><http://199012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19910
>>>1
>>>-
>>>200012.nc<http://200012.nc><http://200012.nc><http://200012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_20010
>>>1
>>>-
>>>200512.nc<http://200512.nc><http://200512.nc><http://200512.nc>
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-1980
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-1990
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-2000
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-2005
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>>-
>>>1
>>>98012.nc<http://98012.nc><http://98012.nc><http://98012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>>-
>>>1
>>>99012.nc<http://99012.nc><http://99012.nc><http://99012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>>-
>>>2
>>>00012.nc<http://00012.nc><http://00012.nc><http://00012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>>-
>>>2
>>>00512.nc<http://00512.nc><http://00512.nc><http://00512.nc>
>>>
>>>
>>>Do I have to pre-process this data first before I can use it with RCMET
>>>?
>>>
>>>I've attached my config file to check if I'm missing something.
>>>
>>>Thanks for your help
>>>
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>>><Mi...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>><mailto
>>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ic
>>>hael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:M
>>>i<mailto:Mi><mailto:Mi<mailto:Mi>>
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:cha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Micha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mich
>>>ael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>:
>>>Hi Rashyd,
>>>
>>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>>released a newer version that may resolve some of your problems. You can
>>>find and download it at [1]. I^1m sure Jinwon will be able to help you
>>>get
>>>this resolved. Thank you for sending the
>>> document you used. I^1ll be sure to get it and the website updated with
>>>the correct information.
>>>
>>>[1]
>>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>>
>>>Thanks much!
>>>
>>>--
>>>Michael J. Joyce
>>>Engineering Applications Software Engineer
>>>Instrument Software and Science Data Systems
>>>NASA Jet Propulsion Laboratory
>>>California Institute of Technology
>>>4800 Oak Grove Drive
>>>Pasadena, California 91109
>>>Mail Stop: 158-242
>>>Tel: (818) 354-7550<tel:%28818%29%20354-7550>
>>>Fax: (818) 393-1370<tel:%28818%29%20393-1370>
>>>
>>>
>>>
>>>From: Rashyd ZAABOUL
>>><za...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>><mailto:zaaboul@gmai<mailto:zaaboul@gma
>>>i><ma...@gmai>>
>>>l.com<http://l.com><http://l.com><mailto:zaaboul@gmail.com<mailto:zaabou
>>>l@gmail.com><ma...@gmail.com>>><mailto
>>>:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><ma...@g><mailto:zaabo
>>>ul@g<ma...@g>>
>>>mail.com<http://mail.com><http://mail.com>>><
>>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.
>>>com<ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>>mail.com><ma...@gmail.com>>><mailto:za
>>>aboul@gmail.c<ma...@gmail.c><mailto:zaaboul@gmail.c<mailto:zaab
>>>oul@gmail.c>>
>>>om<ma...@gmail.com><mailto:zaaboul@gma
>>>il.com<ma...@gmail.com>>>>>>>
>>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>>
>>>To: "Kim, Jinwon (329M-Affiliate)"
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>><ma...@at>
>>>>
>>>mos.ucla.edu<http://mos.ucla.edu><http://mos.ucla.edu><mailto:jkim@atmos
>>>.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>>>jkim@atmos.ucla.edu>>><ma...@atmo><mailto:jkim@at
>>>mo<ma...@atm><mailto:jkim@atm<m
>>>ailto:jkim@atm>>
>>>o>
>>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu><http://s.ucla.edu>><mai
>>>lto:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atm><mai
>>>lto:jkim@atm<ma...@atm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>><mailto:jkim@atmos.u
>>>cla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jk
>>>im@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.ed
>>>u><ma...@atmos.ucla.edu>>>>>>>
>>>Cc: rcmes-dev
>>><rc...@jpl.nasa.gov><mailto:rcmes-dev@
>>>jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.g
>>>ov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:r
>>>cmes-dev@jpl.nasa.gov>>><ma...@j><mailto:r
>>>cmes-dev@j<ma...@j>>
>>>pl.nasa.gov<http://pl.nasa.gov><http://pl.nasa.gov><mailto:rcmes-dev@jpl
>>>.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<m
>>>ailto:rcmes-dev@jpl.nasa.gov>>>><mailto:rcmes-dev@jp<mailto:rcmes-dev@jp
>>>><ma...@jp>><mailto:rc<mailto:rc><mailto:
>>>>rc<mailto:rc>>
>>>mes-dev@jp>
>>>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><http://l.nasa.gov><mail
>>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-de
>>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-<mailto:rcme
>>>s-><mailto:rcmes-<mailto:rcmes->>
>>>dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:dev@jpl.nasa.gov<mailto
>>>:dev@jpl.nasa.gov>>>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev@jp
>>>l.nasa.gov><ma...@jpl.nasa.gov>
>>>><ma...@jpl.na><mailto:rcmes-dev@jpl.
>>>>na<ma...@jpl.na>>
>>>sa.gov<http://sa.gov><http://sa.gov>><m
>>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mail
>>>to:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:ailto%253Arcmes-dev@jpl.nasa.go
>>>v>><mailto:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:ailto%253Arcmes-dev@jpl
>>>.nasa.gov><mailto:ailto%253Arcmes-dev@jpl.nasa.gov<mailto:ailto%25253Arc
>>>mes-dev@jpl.nasa.gov>>>><mail
>>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:to%
>>>3Arcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:r
>>>cmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jp
>>>l.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-d<mailto:rcmes-
>>>d><mailto:rcmes-d<mailto:rcmes-d>><m
>>>ailto:rcmes-d>
>>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ev@jpl.nasa.gov<mailto:ev
>>>@jpl.nasa.gov>><ma...@jpl.nasa.gov><mailto:ev
>>>@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>,
>>> JPL
>>><Mi...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>><mailto
>>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ic
>>>hael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:M
>>>i<mailto:Mi><mailto:Mi<mailto:Mi>>
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:cha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Micha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mich
>>>ael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Jim and Michael,
>>>
>>>I've modified the script
>>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>>json.loads function by simplejson.loads one to get more details on the
>>>error and this is what I got :
>>>
>>>Running using config file: ../rcmes/resources/mena.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>>line 27, in getParams
>>> paramDict = simplejson.loads(httpRequest.text)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>>> return _default_decoder.decode(s)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>>> obj, end = self.raw_decode(s)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>>> return self.scan_once(s, idx=_w(s, idx).end())
>>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>>(char 0)
>>>
>>>What does this error mean ? I'm afraid the database RCMED is down while
>>>I'm trying to get data out of it !
>>>
>>>Best regards
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>><ma...@at>
>>>>
>>>mos.ucla.edu<http://mos.ucla.edu><http://mos.ucla.edu><mailto:jkim@atmos
>>>.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>>>jkim@atmos.ucla.edu>>><ma...@atmo><mailto:jkim@at
>>>mo<ma...@atm><mailto:jkim@atm<m
>>>ailto:jkim@atm>>
>>>o>
>>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu><http://s.ucla.edu>><mai
>>>lto:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atm><mai
>>>lto:jkim@atm<ma...@atm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>><mailto:jkim@atmos.u
>>>cla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jk
>>>im@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.ed
>>>u><ma...@atmos.ucla.edu>>>>>>>:
>>>Thanks for your interests.
>>>
>>>For organizing your data:
>>>
>>>You can put your model data in your own directory. Then specify the link
>>>to the data (or data files) in the configure file, [MODEL] block. The
>>>code currently takes netcdf format files for input.
>>>
>>>If you use the observed data in the RCMES database, just specify the
>>>parameter numbers in the [RCMED] block, also in the configure file. If
>>>you use your own observation data, you can specify it in the same block
>>>(it also takes netcdf-format files).
>>>
>>>Hope this helps.
>>>
>>>
>>>With best regards,
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.edu<ma
>>>ilto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.u
>>>cla.edu>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>>><ma...@atmos.ucla.edu><mailto:jkim@atmo
>>>s.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailt
>>>o:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla
>>>.edu>>>>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jki
>>>m@atmos.ucla.edu>>><ma...@atmos><mailto:jkim@atm
>>>os<ma...@atm><mailto:jkim@atm<
>>>mailto:jkim@atm>>
>>>os>
>>>.ucla.edu<http://ucla.edu><http://ucla.edu><http://ucla.edu>><mailto:jki
>>>m@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<
>>>mailto:jkim@atmos.ucla.edu>><ma...@atmos><mailto
>>>:jkim@atmos<ma...@atmos>>.
>>>ucla.edu<http://ucla.edu><http://ucla.edu>><mailto:jkim@atmos.ucla.edu<m
>>>ailto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.
>>>ucla.edu>><ma...@atmos.ucla.edu><mailto
>>>:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>><mailto:zaaboul@gmai<mailto:zaaboul@gma
>>>i><ma...@gmai>>
>>>l.com<http://l.com><http://l.com><mailto:zaaboul@gmail.com<mailto:zaabou
>>>l@gmail.com><ma...@gmail.com>>><mailto
>>>:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><ma...@g><mailto:zaabo
>>>ul@g<ma...@g>>
>>>mail.com<http://mail.com><http://mail.com>>><
>>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.
>>>com<ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>>mail.com><ma...@gmail.com>>><mailto:za
>>>aboul@gmail.c<ma...@gmail.c><mailto:zaaboul@gmail.c<mailto:zaab
>>>oul@gmail.c>>
>>>om<ma...@gmail.com><mailto:zaaboul@gma
>>>il.com<ma...@gmail.com>>>>>>]
>>>Sent: Tuesday, May 27, 2014 7:59 AM
>>>
>>>To:
>>>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@j
>>>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.go
>>>v<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rc
>>>mes-dev@jpl.nasa.gov>>><ma...@jp><mailto:
>>>rcmes-dev@jp<ma...@jp>>
>>>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><mailto:rcmes-dev@jpl.na
>>>sa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mail
>>>to:rcmes-dev@jpl.nasa.gov>>>><ma...@jpl>
>>><ma...@jpl>><mailto:rc<mailto:rc><mailto
>>>:rc<mailto:rc>>
>>>mes-dev@jpl>
>>>.nasa.gov<http://nasa.gov><http://nasa.gov><http://nasa.gov><mailto:rcme
>>>s-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.n
>>>asa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev<mailto:rcmes-de
>>>v><mailto:rcmes-dev<mailto:rcmes-dev>>
>>>@jpl.nasa.gov<http://jpl.nasa.gov><http://jpl.nasa.gov>>>><mailto:rcmes-
>>>dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nas
>>>a.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa<mailto:r
>>>cmes-dev@jpl.nasa><ma...@jpl.nasa>>
>>>.
>>>gov><ma
>>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:ilto%3Arcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><
>>>mailto:ilto%3Arcmes-dev@jpl.nasa.gov<mailto:ilto%253Arcmes-dev@jpl.nasa.
>>>gov><mailto:ilto%253Arcmes-dev@jpl.nasa.gov<mailto:ilto%25253Arcmes-dev@
>>>jpl.nasa.gov>>>><mailto
>>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@
>>>jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.g
>>>ov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:r
>>>cmes-dev@jpl.nasa.gov>>><mailto:rcmes-de<mailto:rcmes-de><mailto:rcmes-d
>>>e<mailto:rcmes-de>><ma
>>>ilto:rcmes-de>
>>>v@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:v@jpl.nasa.gov<mailto:v@jpl
>>>.nasa.gov>><ma...@jpl.nasa.gov><mailto:v@jpl.na
>>>sa.gov<ma...@jpl.nasa.gov>>>>>>
>>>Subject: failed to run rcmes following the step-by-step document
>>>
>>>Hi
>>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>>TRMM ... I followed the step-by-step document but it seems that
>>>something
>>>is missing there. For example it doesn't tell how to organize my data?
>>>where to put the observations ...
>>>
>>>Could you please provide me with any useful documentation that can help
>>>me setup RCMES to evaluate those models?
>>>
>>>Thanks
>>>Rashyd
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>>Office : +971 4 336 1100 x 259<tel:%2B971%204%20336%201100%20x%20259>
>>>
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>><ma...@biosali><mailto:r.zaab
>>>oul@biosali<ma...@biosali>><mailto:r.zaabou<mailto:r.zaabou><
>>>mailto:r.zaabou<mailto:r.zaabou>>
>>>l@biosali>
>>>ne.org.ae<http://ne.org.ae><http://ne.org.ae><http://ne.org.ae><mailto:r
>>>.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<m
>>>ailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaaboul@biosaline
>>>.or<ma...@biosaline.or><mailto:r.zaaboul@biosaline.or<mailto:
>>>r.zaaboul@biosaline.or>><ma...@b><mailto:r
>>>.zaaboul@b<ma...@b>>
>>>iosaline.or>
>>>g.ae<http://g.ae><http://g.ae><http://g.ae><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:r.za
>>>aboul@bios><ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae>>>><mailto:r.zaabo
>>>ul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bi
>>>osal<ma...@biosal><mailto:r.zaaboul@biosal<mailto:r.zaaboul@b
>>>iosal>>
>>>ine.org.ae<http://ine.org.ae><http://ine.org.ae>>
>>><ma...@biosaline.org.ae><ma
>>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mail
>>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><ma
>>>ilto:r.zaaboul@biosaline.org.ae<mailto:ilto%3Ar.zaaboul@biosaline.org.ae
>>>><mailto:ilto%3Ar.zaaboul@biosaline.org.ae<mailto:ilto%253Ar.zaaboul@bio
>>>>saline.org.ae>><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@bios
>>>>aline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosal
>>>>ine.org.ae>>><mail
>>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><ma
>>>ilto:to%3Ar.zaaboul@biosaline.org.ae<mailto:to%253Ar.zaaboul@biosaline.o
>>>rg.ae>><mailto:to%3Ar.zaaboul@biosaline.org.ae<mailto:to%253Ar.zaaboul@b
>>>iosaline.org.ae><mailto:to%253Ar.zaaboul@biosaline.org.ae<mailto:to%2525
>>>3Ar.zaaboul@biosaline.org.ae>>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>
>>>Climate and Water Modeling Scientist
>>>
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaabo
>>ul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@b
>>iosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
>
>
Re: failed to run rcmes following the step-by-step document
Posted by "Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>.
Hey Jinwon,
Within the OCW library RCMED is only invoked if the user invokes it using
ocw.data_source.rcmed.py.
I believe the code that will replace your Question/Answer based program
will be the Command Line Interface that Mazi is working on and will be
pushing to the OCW repository.
I hope that Mazi will isolate the RCMED accessing logic into a section of
his program that is active once a user requests RCMED data and not before.
Best Regards,
Cameron
On 6/16/14 8:11 AM, "Kim, Jinwon" <jk...@atmos.ucla.edu> wrote:
>Hi Cam,
>
>Thanks for providing the patch. Is this be a permanent fix to this
>problem that can be included in the next OCW version?
>
>
>Cheers,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu; 310-206-2828
>________________________________________
>From: sigep311@gmail.com [sigep311@gmail.com] on behalf of Cameron
>Goodale [goodale@apache.org]
>Sent: Monday, June 16, 2014 6:26 AM
>To: dev@climate.apache.org
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Rashyd,
>
>You are correct that the RCMED was being called regardless of what the
>obsSource value was set to.
>
>I have moved the code around a little bit and attached it here.
>
>This updated copy should function properly without an internet connection
>to the RCMED required.
>
>Best Regards,
>
>
>Cameron
>
>
>On Sun, Jun 15, 2014 at 9:53 PM, Rashyd ZAABOUL
><za...@gmail.com>> wrote:
>Hi all,
>
>I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When
>the laptop is connected to internet it works but if I disconnect it and
>try to run rcmet again it gives this message:
>
>Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.get_parameters_metadata()
> File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line
>45, in get_parameters_metadata
> string = urllib2.urlopen(url)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
> return _opener.open(url, data, timeout)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
> response = self._open(req, data)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
> '_open', req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
> result = func(*args)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
> return self.do_open(httplib.HTTPConnection, req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
> raise URLError(err)
>urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
>
>
>So why it's trying to connect to RCMED if my obsSource=1 ?
>I've attached my rcmet.py
>
>Thanks and regards
>Rashyd
>
>
>2014-06-03 1:16 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>:
>It's really nice to hear that it's useful for your research.
>
>With best regards,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>;
>310-206-2828<tel:310-206-2828>
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>Sent: Monday, June 02, 2014 10:08 PM
>To: Mattmann, Chris A (3980)
>Cc: Kim, Jinwon; sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Thank you Chris and many thanks to all your colleagues for their help.
>It's very useful tool and I keep sending requests to the mailing lists
>you mentioned.
>
>Kim, I'll look at the code and try to use the function calc_pdf.
>
>Thanks and best regards
>Rashyd
>
>
>2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980)
><ch...@jpl.nasa.gov><mailt
>o:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>:
>Thanks Guys. Rashyd, I just wanted to let you know to feel free to
>keep sending any questions you have to
>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.a
>pache.org<ma...@climate.apache.org>> and
>including the mailing list as it really helps to show the activity
>going on.
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email:
>chris.a.mattmann@nasa.gov<ma...@nasa.gov><mailto:chris.a
>.mattmann@nasa.gov<ma...@nasa.gov>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: <Kim>, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>>>
>Date: Monday, June 2, 2014 7:56 AM
>To: Rashyd ZAABOUL
><za...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>>>
>Cc: Chris Mattmann
><Ch...@jpl.nasa.gov><mailt
>o:Chris.A.Mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>,
>"sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>.res.in<ma...@tropmet.res.in>>"
><sa...@tropmet.res.in><mailto:sanjay@tropmet
>.res.in<ma...@tropmet.res.in>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>met.res.in<ma...@tropmet.res.in>>"
><ra...@tropmet.res.in><mailto:ramarao@trop
>met.res.in<ma...@tropmet.res.in>>>, "Joyce, Michael J (398J)"
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>,
>rcmes-dev
><rc...@jpl.nasa.gov><mailto:rcmes-dev@jp
>l.nasa.gov<ma...@jpl.nasa.gov>>>,
>"Goodale, Cameron E (398J)"
><ca...@jpl.nasa.gov><mai
>lto:cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>
>>,
>"dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>apache.org<ma...@climate.apache.org>>"
><de...@climate.apache.org><mailto:dev@climate.
>apache.org<ma...@climate.apache.org>>>, "Mcgibbney, Lewis J
>(398J)"
><Le...@jpl.nasa.gov><mai
>lto:Lewis.J.Mcgibbney@jpl.nasa.gov<ma...@jpl.nasa.gov>>
>>
>Subject: RE: failed to run rcmes following the step-by-step document
>
>>Glad to hear it works.
>>
>>pdf calculation is not included in the metrics menu at this time, but a
>>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>>(e.g., model and observations) is available in the code. the routine is:
>>'calc_pdf' in the code
>>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>>
>>to access/modify,
>>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>>(2) edit the file 'metrics.py' using an editor, for example, "vi
>>metrics.py",
>>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>>
>>if you are familiar with python, you may be able to use that routine to
>>create an option to calculate pdf's (and cdf's). if you are not familiar
>>with python, we can add it to the next release, but will take a few
>>weeks.
>>
>>
>>Hope this is helpful.
>>
>>
>>Best,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>>]
>>Sent: Monday, June 02, 2014 3:50 AM
>>To: Kim, Jinwon
>>Cc: Mattmann, Chris A (3980);
>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>>.res.in<ma...@tropmet.res.in>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>>met.res.in<ma...@tropmet.res.in>>; Joyce, Michael J (398J);
>>rcmes-dev; Goodale,
>>Cameron E (398J);
>>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>>apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J (398J)
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi all,
>>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>>... Now I've two questions :
>>- Is it possible to compute PDFs and CDFs and other metrics?
>>- Is it possible to compute these metrics on other parameters such as 2m
>>temperature, 500mb height, wind at different levels to compare with
>>reanalysis for example?
>>
>>Best regards
>>Rashyd
>>
>>
>>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@at
>>mos.ucla.edu><ma...@atmos.ucla.edu>>>>:
>>The problem was the correct rcmet.py was not copied to
>>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>>will resolve this problem. I've always run rcmet from
>>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until
>>today.
>>
>>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu><ma...@atmos.ucla.edu>>>;
>>310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Mattmann, Chris A (3980)
>>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov><mail
>>to:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>><m
>>ailto:chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>
>><mailto:chris.a.mattmann@jpl.nasa.gov<mailto:chris.a.mattmann@jpl.nasa.go
>>v>>>]
>>Sent: Sunday, June 01, 2014 9:43 AM
>>To: Rashyd ZAABOUL; Kim, Jinwon
>>Cc:
>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropmet
>>.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mailt
>>o:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@tropm
>>et.res.in>>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@trop
>>met.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in<
>>mailto:ramarao@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:ramar
>>ao@tropmet.res.in>>>; Joyce, Michael J
>>(398J); rcmes-dev; Goodale, Cameron E (398J);
>>dev@climate.apache.org<ma...@climate.apache.org><mailto:dev@climate.
>>apache.org<ma...@climate.apache.org>><mailto:dev@climate.apache.org<
>>mailto:dev@climate.apache.org><mailto:dev@climate.apache.org<mailto:dev@c
>>limate.apache.org>>>; Mcgibbney, Lewis J
>>(398J)
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Rashyd,
>>
>>I'm CC'ing the Apache list for the Open Climate Workbench project where
>>we have a lot of eyes on the list. Maybe someone on the Apache list can
>>help as well.
>>
>>Also we are happy to have a Skype/telecon with you this week to get
>>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>>work with Rashyd to get his problem fixed.
>>
>>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>>Paul help out on this - they'll take it from here.
>>
>>Cheers,
>>Chris
>>
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>Chris Mattmann, Ph.D.
>>Chief Architect
>>Instrument Software and Science Data Systems Section (398)
>>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>>Office: 168-519, Mailstop: 168-5th floor
>>Email:
>>chris.a.mattmann@nasa.gov<ma...@nasa.gov><mailto:chris.
>>a.mattmann@nasa.gov<ma...@nasa.gov>><mailto:chris.a.mat
>>tmann@nasa.gov<ma...@nasa.gov><mailto:chris.a.mattmann@
>>nasa.gov<ma...@nasa.gov>>>
>>WWW: http://sunset.usc.edu/~mattmann/
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>Adjunct Associate Professor, Computer Science Department
>>University of Southern California, Los Angeles, CA 90089 USA
>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>
>>
>>
>>
>>
>>
>>-----Original Message-----
>>From: Rashyd ZAABOUL
>><za...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>>><ma...@gmail.com>>>>
>>Date: Sunday, June 1, 2014 2:31 AM
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@at
>>mos.ucla.edu><ma...@atmos.ucla.edu>>>>
>>Cc:
>>"sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropme
>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mail
>>to:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@trop
>>met.res.in>>>"
>><sa...@tropmet.res.in><mailto:sanjay@tropme
>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mail
>>to:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@trop
>>met.res.in>>>>,
>>"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@tro
>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in
>><ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:rama
>>rao@tropmet.res.in>>>"
>><ra...@tropmet.res.in><mailto:ramarao@tro
>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.in
>><ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:rama
>>rao@tropmet.res.in>>>>, "Joyce, Michael J
>>(398J)"
>><Mi...@jpl.nasa.gov><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailt
>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>,
>>rcmes-dev
>><rc...@jpl.nasa.gov><mailto:rcmes-dev@j
>>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov
>><ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcme
>>s-dev@jpl.nasa.gov>>>>, "Goodale,
>>Cameron E (398J)"
>><ca...@jpl.nasa.gov><ma
>>ilto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
>>>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nas
>>>>a.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@j
>>>>pl.nasa.gov>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>>contains params = db.getParams() on line 194 !!!
>>>
>>>
>>>I've tried this tar file which is equal to the previous one (I've
>>>modified the line 194 in rcmet.py) and I've got the same error:
>>>
>>>
>>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>>
>>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,ob
>>>s
>>>L
>>>atName,obsTimeName,obsTimestep,gridBox,models)
>>>ValueError: too many values to unpack
>>>
>>>
>>>
>>>
>>>Regards
>>>Rashyd
>>>
>>>
>>>
>>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>>>:
>>>
>>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>>tar file again. Please check this one out. Please clean up previous
>>>versions and try the attached one with the included config file
>>>(cordexMENA.cfg). This is the code/config file I used
>>> to create the figures I sent in the earlier e-mail.
>>>
>>>For your error messages:
>>>
>>>(1) The parameter "obsSource" directs the code where to find observation
>>>data for evaluation. "obsSource=1" is reserved for the case users
>>>provide
>>>their own observation data. If you set obsSource=1 and do not provide
>>>data, it will result in error exit as the
>>> code cannot find the observation data file(s) specified by the user.
>>>Thus, unless you provide your own observation data, obsSource=1 must not
>>>be used.
>>>
>>>(2) The exit message "No input observation data file. EXIT" occurs when
>>>there is no observation data file id's are assigned when obsSource=0 is
>>>set. This can happen if "obsParamId" in the config file is not properly
>>>set. We don't expect any problems if obsParamId
>>> is correctly set because the data specified by obsParamId are included
>>>in the database (this requires active internet connection). Will you
>>>send
>>>me your configure file so that I can look at it?
>>>
>>>
>>>
>>>
>>>Thanks for your patience.
>>>
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>>]
>>>
>>>Sent: Saturday, May 31, 2014 11:58 PM
>>>To: Kim, Jinwon
>>>Cc:
>>>sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:sanjay@tropme
>>>t.res.in<ma...@tropmet.res.in>><mailto:sanjay@tropmet.res.in<mai
>>>lto:sanjay@tropmet.res.in><mailto:sanjay@tropmet.res.in<mailto:sanjay@tr
>>>opmet.res.in>>>;
>>>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:ramarao@tro
>>>pmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropmet.res.i
>>>n<ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<mailto:ra
>>>marao@tropmet.res.in>>>
>>><ma...@tropmet.res.in><mailto:ram
>>>arao@tropmet.res.in<ma...@tropmet.res.in>><mailto:ramarao@tropm
>>>et.res.in<ma...@tropmet.res.in><mailto:ramarao@tropmet.res.in<m
>>>ailto:ramarao@tropmet.res.in>>>>; Joyce,
>>>Michael J
>>>(398J); rcmes-dev;
>>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.go
>>>v>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.n
>>>asa.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@
>>>jpl.nasa.gov>>>
>>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa
>>>.gov><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl
>>>.nasa.gov>><mailto:cameron.e.goodale@jpl.nasa<mailto:cameron.e.goodale@j
>>>pl.nasa><mailto:cameron.e.goodale@jpl.nasa<mailto:cameron.e.goodale@jpl.
>>>nasa>>.
>>>gov>>
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>
>>>Hi Kim,
>>>
>>>Thank you for your help. I'm sorry but I'm getting confused with all
>>>these different packages I received from you and your colleagues!. The
>>>last one you just sent to me still contains params = db.getParams() in
>>>rcmet.py at line 194. I've replaced this file
>>> with the one sent by Cameron before and it seems to be ok. But when
>>>I've
>>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>>this error :
>>>
>>>...
>>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>>analysis grid
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 237, in runUsingConfig
>>>
>>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,ob
>>>s
>>>L
>>>atName,obsTimeName,obsTimestep,gridBox,models)
>>>ValueError: too many values to unpack
>>>
>>>Do you know how can I fix this please?
>>>
>>>NOTE: with obsSource=0 I got :
>>>No input observation data file. EXIT
>>>
>>>Thanks and regards
>>>Rashyd
>>>
>>>
>>>
>>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>>>:
>>>To all,
>>>
>>>*** Please update your RCMET with the attached version 2.1.3. ***
>>>
>>>I found that some files included in the earlier tar file for the release
>>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>>successfully ran a test case with a MENA domain dataset; the version
>>>works properly now. I apologize for inconvenience.
>>>
>>>Rashyd:
>>>Please see the two attached figures for the MENA domain (model bias,
>>>GPCP
>>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>>configure file for this processing is:
>>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>>domain has been adjusted to fit the MENA domain.
>>>
>>>
>>>Aanjay and Rama:
>>>The code also works fine with the India domain. The two attached figures
>>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>>of model ensemble against TRMM for the same period. The sample configure
>>>file is: cordexIndia.cfg under resources/
>>> (the same location as the MENA config file).
>>>
>>>Please contact me/mike/rcmes-dev if you have any questions.
>>>
>>>
>>>With best regards,
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>>;
>>>310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>>]
>>>
>>>Sent: Thursday, May 29, 2014 12:07 AM
>>>To: Kim, Jinwon
>>>Cc: Joyce, Michael J (398J); rcmes-dev
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Michael,
>>>The package you've just sent to me contains the same rcmet.py as the
>>>package 2.1.2 and has on line 194 :
>>> params = db.getParams()
>>>
>>>Is it the right one? Because I'm still having the same error :
>>>
>>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>>AttributeError: 'module' object has no attribute 'getParams'
>>>
>>>I've attached one of the files that I'm trying to use.
>>>
>>>Thanks again
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>>>:
>>>Here comes the attachment.
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.edu<ma
>>>ilto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.u
>>>cla.edu>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>>><ma...@atmos.ucla.edu><mailto:jkim@atmo
>>>s.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailt
>>>o:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla
>>>.edu>>>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>>]
>>>
>>>Sent: Wednesday, May 28, 2014 10:27 PM
>>>To: Joyce, Michael J (398J)
>>>Cc: Kim, Jinwon; rcmes-dev
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Michael,
>>>
>>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>>
>>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>>AttributeError: 'module' object has no attribute 'getParams'
>>>
>>>My
>>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/r
>>>c
>>>m
>>>es
>>>
>>>I'm using files for precipitation exactly as I download them from ESGF
>>>portal for CORDEX MENA domain. The files I'm using are :
>>>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19710
>>>1
>>>-
>>>198012.nc<http://198012.nc><http://198012.nc><http://198012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19810
>>>1
>>>-
>>>199012.nc<http://199012.nc><http://199012.nc><http://199012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_19910
>>>1
>>>-
>>>200012.nc<http://200012.nc><http://200012.nc><http://200012.nc>
>>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_20010
>>>1
>>>-
>>>200512.nc<http://200512.nc><http://200512.nc><http://200512.nc>
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-1980
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-1990
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-2000
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-2005
>>>1
>>>2
>>>.nc
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>>-
>>>1
>>>98012.nc<http://98012.nc><http://98012.nc><http://98012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>>-
>>>1
>>>99012.nc<http://99012.nc><http://99012.nc><http://99012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>>-
>>>2
>>>00012.nc<http://00012.nc><http://00012.nc><http://00012.nc>
>>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>>-
>>>2
>>>00512.nc<http://00512.nc><http://00512.nc><http://00512.nc>
>>>
>>>
>>>Do I have to pre-process this data first before I can use it with RCMET
>>>?
>>>
>>>I've attached my config file to check if I'm missing something.
>>>
>>>Thanks for your help
>>>
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>>><Mi...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>><mailto
>>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ic
>>>hael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:M
>>>i<mailto:Mi><mailto:Mi<mailto:Mi>>
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:cha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Micha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mich
>>>ael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>:
>>>Hi Rashyd,
>>>
>>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>>released a newer version that may resolve some of your problems. You can
>>>find and download it at [1]. I^1m sure Jinwon will be able to help you
>>>get
>>>this resolved. Thank you for sending the
>>> document you used. I^1ll be sure to get it and the website updated with
>>>the correct information.
>>>
>>>[1]
>>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>>
>>>Thanks much!
>>>
>>>--
>>>Michael J. Joyce
>>>Engineering Applications Software Engineer
>>>Instrument Software and Science Data Systems
>>>NASA Jet Propulsion Laboratory
>>>California Institute of Technology
>>>4800 Oak Grove Drive
>>>Pasadena, California 91109
>>>Mail Stop: 158-242
>>>Tel: (818) 354-7550<tel:%28818%29%20354-7550>
>>>Fax: (818) 393-1370<tel:%28818%29%20393-1370>
>>>
>>>
>>>
>>>From: Rashyd ZAABOUL
>>><za...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>><mailto:zaaboul@gmai<mailto:zaaboul@gma
>>>i><ma...@gmai>>
>>>l.com<http://l.com><http://l.com><mailto:zaaboul@gmail.com<mailto:zaabou
>>>l@gmail.com><ma...@gmail.com>>><mailto
>>>:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><ma...@g><mailto:zaabo
>>>ul@g<ma...@g>>
>>>mail.com<http://mail.com><http://mail.com>>><
>>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.
>>>com<ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>>mail.com><ma...@gmail.com>>><mailto:za
>>>aboul@gmail.c<ma...@gmail.c><mailto:zaaboul@gmail.c<mailto:zaab
>>>oul@gmail.c>>
>>>om<ma...@gmail.com><mailto:zaaboul@gma
>>>il.com<ma...@gmail.com>>>>>>>
>>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>>
>>>To: "Kim, Jinwon (329M-Affiliate)"
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>><ma...@at>
>>>>
>>>mos.ucla.edu<http://mos.ucla.edu><http://mos.ucla.edu><mailto:jkim@atmos
>>>.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>>>jkim@atmos.ucla.edu>>><ma...@atmo><mailto:jkim@at
>>>mo<ma...@atm><mailto:jkim@atm<m
>>>ailto:jkim@atm>>
>>>o>
>>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu><http://s.ucla.edu>><mai
>>>lto:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atm><mai
>>>lto:jkim@atm<ma...@atm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>><mailto:jkim@atmos.u
>>>cla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jk
>>>im@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.ed
>>>u><ma...@atmos.ucla.edu>>>>>>>
>>>Cc: rcmes-dev
>>><rc...@jpl.nasa.gov><mailto:rcmes-dev@
>>>jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.g
>>>ov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:r
>>>cmes-dev@jpl.nasa.gov>>><ma...@j><mailto:r
>>>cmes-dev@j<ma...@j>>
>>>pl.nasa.gov<http://pl.nasa.gov><http://pl.nasa.gov><mailto:rcmes-dev@jpl
>>>.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<m
>>>ailto:rcmes-dev@jpl.nasa.gov>>>><mailto:rcmes-dev@jp<mailto:rcmes-dev@jp
>>>><ma...@jp>><mailto:rc<mailto:rc><mailto:
>>>>rc<mailto:rc>>
>>>mes-dev@jp>
>>>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><http://l.nasa.gov><mail
>>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-de
>>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-<mailto:rcme
>>>s-><mailto:rcmes-<mailto:rcmes->>
>>>dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:dev@jpl.nasa.gov<mailto
>>>:dev@jpl.nasa.gov>>>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev@jp
>>>l.nasa.gov><ma...@jpl.nasa.gov>
>>>><ma...@jpl.na><mailto:rcmes-dev@jpl.
>>>>na<ma...@jpl.na>>
>>>sa.gov<http://sa.gov><http://sa.gov>><m
>>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mail
>>>to:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:ailto%253Arcmes-dev@jpl.nasa.go
>>>v>><mailto:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:ailto%253Arcmes-dev@jpl
>>>.nasa.gov><mailto:ailto%253Arcmes-dev@jpl.nasa.gov<mailto:ailto%25253Arc
>>>mes-dev@jpl.nasa.gov>>>><mail
>>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:to%
>>>3Arcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:r
>>>cmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jp
>>>l.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-d<mailto:rcmes-
>>>d><mailto:rcmes-d<mailto:rcmes-d>><m
>>>ailto:rcmes-d>
>>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ev@jpl.nasa.gov<mailto:ev
>>>@jpl.nasa.gov>><ma...@jpl.nasa.gov><mailto:ev
>>>@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>,
>>> JPL
>>><Mi...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailt
>>>o:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><ma
>>>ilto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>>><mailt
>>>o:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><
>>>mailto:
>>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>>to:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mai
>>>lto:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>><mailto
>>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:i
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ic
>>>hael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:M
>>>i<mailto:Mi><mailto:Mi<mailto:Mi>>
>>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:cha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Micha
>>>el.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mich
>>>ael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>
>>>Subject: Re: failed to run rcmes following the step-by-step document
>>>
>>>Hi Jim and Michael,
>>>
>>>I've modified the script
>>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>>json.loads function by simplejson.loads one to get more details on the
>>>error and this is what I got :
>>>
>>>Running using config file: ../rcmes/resources/mena.cfg
>>>Traceback (most recent call last):
>>> File "rcmet.py", line 299, in <module>
>>> runUsingConfig(args.CONFIG)
>>> File "rcmet.py", line 194, in runUsingConfig
>>> params = db.getParams()
>>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>>line 27, in getParams
>>> paramDict = simplejson.loads(httpRequest.text)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>>> return _default_decoder.decode(s)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>>> obj, end = self.raw_decode(s)
>>> File
>>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7
>>>-
>>>l
>>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>>> return self.scan_once(s, idx=_w(s, idx).end())
>>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>>(char 0)
>>>
>>>What does this error mean ? I'm afraid the database RCMED is down while
>>>I'm trying to get data out of it !
>>>
>>>Best regards
>>>Rashyd
>>>
>>>
>>>
>>>
>>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.
>>>edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@
>>>atmos.ucla.edu><ma...@atmos.ucla.edu>>>
>>><ma...@atmos.ucla.e><mailto:jkim@atmos.uc
>>>la.e<ma...@atmos.ucla.e>>
>>>du<ma...@atmos.ucla.edu><mailto:jkim@at
>>>mos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.ed<ma
>>>ilto:jkim@atmos.ucla.ed><mailto:jkim@atmos.ucla.ed<mailto:jkim@atmos.ucl
>>>a.ed>><ma...@atm>
>>>>
>>>os.ucla.ed>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mail
>>>to:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucl
>>>a.edu>>>>><ma...@at>
>>>>
>>>mos.ucla.edu<http://mos.ucla.edu><http://mos.ucla.edu><mailto:jkim@atmos
>>>.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>>>jkim@atmos.ucla.edu>>><ma...@atmo><mailto:jkim@at
>>>mo<ma...@atm><mailto:jkim@atm<m
>>>ailto:jkim@atm>>
>>>o>
>>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu><http://s.ucla.edu>><mai
>>>lto:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atm><mai
>>>lto:jkim@atm<ma...@atm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>><mailto:jkim@atmos.u
>>>cla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jk
>>>im@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.ed
>>>u><ma...@atmos.ucla.edu>>>>>>>:
>>>Thanks for your interests.
>>>
>>>For organizing your data:
>>>
>>>You can put your model data in your own directory. Then specify the link
>>>to the data (or data files) in the configure file, [MODEL] block. The
>>>code currently takes netcdf format files for input.
>>>
>>>If you use the observed data in the RCMES database, just specify the
>>>parameter numbers in the [RCMED] block, also in the configure file. If
>>>you use your own observation data, you can specify it in the same block
>>>(it also takes netcdf-format files).
>>>
>>>Hope this helps.
>>>
>>>
>>>With best regards,
>>>
>>>-----------------------------------------------------------------
>>>Jinwon Kim
>>>Joint Institute for Regional Earth System Science and Engineering and
>>>Dept. Atmospheric and Oceanic Sciences
>>>University of California, Los Angeles
>>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>>90095-7228, USA
>>>
>>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@a
>>>tmos.ucla.edu><ma...@atmos.ucla.edu>>><
>>>mailto:jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atmos.u
>>>cla.ed<ma...@atmos.ucla.ed>>
>>>u<ma...@atmos.ucla.edu><mailto:jkim@atm
>>>os.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atmos.ucla.edu<ma
>>>ilto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.u
>>>cla.edu>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>>><ma...@atmos.ucla.edu><mailto:jkim@atmo
>>>s.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailt
>>>o:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla
>>>.edu>>>>><ma...@atm><mailto:jkim@atm<mailto:jkim@a
>>>tm>>
>>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu><mailto:jkim@atmos.uc
>>>la.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jki
>>>m@atmos.ucla.edu>>><ma...@atmos><mailto:jkim@atm
>>>os<ma...@atm><mailto:jkim@atm<
>>>mailto:jkim@atm>>
>>>os>
>>>.ucla.edu<http://ucla.edu><http://ucla.edu><http://ucla.edu>><mailto:jki
>>>m@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<
>>>mailto:jkim@atmos.ucla.edu>><ma...@atmos><mailto
>>>:jkim@atmos<ma...@atmos>>.
>>>ucla.edu<http://ucla.edu><http://ucla.edu>><mailto:jkim@atmos.ucla.edu<m
>>>ailto:jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.
>>>ucla.edu>><ma...@atmos.ucla.edu><mailto
>>>:jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>>>;
>>> 310-206-2828<tel:310-206-2828>
>>>________________________________________
>>>From: Rashyd ZAABOUL
>>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.c
>>>om><ma...@gmail.com>>><mailto:zaaboul@
>>>gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaab
>>>oul@gmail.com>><mai
>>>lto:zaaboul@gmail.com<ma...@gmail.com><mailto:lto%3Azaabo
>>>ul@gmail.com<ma...@gmail.com>>>><mailto:zaaboul@gmail.c
>>>om<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gma
>>>il.com>><ma...@gmail.com><mailto:zaabo
>>>ul@gmail.com<ma...@gmail.com>>
>>>><mail
>>>to:zaaboul@gmail.com<ma...@gmail.com><mailto:to%3Azaaboul@
>>>gmail.com<ma...@gmail.com>><mailto:to%3Azaaboul@gmail.co
>>>m<ma...@gmail.com><mailto:to%253Azaaboul@gmail.com<mailt
>>>o:to%25253Azaaboul@gmail.com>>>>><mailto:zaaboul@gmai<mailto:zaaboul@gma
>>>i><ma...@gmai>>
>>>l.com<http://l.com><http://l.com><mailto:zaaboul@gmail.com<mailto:zaabou
>>>l@gmail.com><ma...@gmail.com>>><mailto
>>>:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<ma
>>>ilto:zaaboul@gmail.com>><ma...@g><mailto:zaabo
>>>ul@g<ma...@g>>
>>>mail.com<http://mail.com><http://mail.com>>><
>>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.
>>>com<ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>>mail.com><ma...@gmail.com>>><mailto:za
>>>aboul@gmail.c<ma...@gmail.c><mailto:zaaboul@gmail.c<mailto:zaab
>>>oul@gmail.c>>
>>>om<ma...@gmail.com><mailto:zaaboul@gma
>>>il.com<ma...@gmail.com>>>>>>]
>>>Sent: Tuesday, May 27, 2014 7:59 AM
>>>
>>>To:
>>>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@j
>>>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.go
>>>v<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rc
>>>mes-dev@jpl.nasa.gov>>><ma...@jp><mailto:
>>>rcmes-dev@jp<ma...@jp>>
>>>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><mailto:rcmes-dev@jpl.na
>>>sa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mail
>>>to:rcmes-dev@jpl.nasa.gov>>>><ma...@jpl>
>>><ma...@jpl>><mailto:rc<mailto:rc><mailto
>>>:rc<mailto:rc>>
>>>mes-dev@jpl>
>>>.nasa.gov<http://nasa.gov><http://nasa.gov><http://nasa.gov><mailto:rcme
>>>s-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.n
>>>asa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev<mailto:rcmes-de
>>>v><mailto:rcmes-dev<mailto:rcmes-dev>>
>>>@jpl.nasa.gov<http://jpl.nasa.gov><http://jpl.nasa.gov>>>><mailto:rcmes-
>>>dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nas
>>>a.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa<mailto:r
>>>cmes-dev@jpl.nasa><ma...@jpl.nasa>>
>>>.
>>>gov><ma
>>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto
>>>:ilto%3Arcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><
>>>mailto:ilto%3Arcmes-dev@jpl.nasa.gov<mailto:ilto%253Arcmes-dev@jpl.nasa.
>>>gov><mailto:ilto%253Arcmes-dev@jpl.nasa.gov<mailto:ilto%25253Arcmes-dev@
>>>jpl.nasa.gov>>>><mailto
>>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@
>>>jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.g
>>>ov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:r
>>>cmes-dev@jpl.nasa.gov>>><mailto:rcmes-de<mailto:rcmes-de><mailto:rcmes-d
>>>e<mailto:rcmes-de>><ma
>>>ilto:rcmes-de>
>>>v@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:v@jpl.nasa.gov<mailto:v@jpl
>>>.nasa.gov>><ma...@jpl.nasa.gov><mailto:v@jpl.na
>>>sa.gov<ma...@jpl.nasa.gov>>>>>>
>>>Subject: failed to run rcmes following the step-by-step document
>>>
>>>Hi
>>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>>TRMM ... I followed the step-by-step document but it seems that
>>>something
>>>is missing there. For example it doesn't tell how to organize my data?
>>>where to put the observations ...
>>>
>>>Could you please provide me with any useful documentation that can help
>>>me setup RCMES to evaluate those models?
>>>
>>>Thanks
>>>Rashyd
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>>Office : +971 4 336 1100 x 259<tel:%2B971%204%20336%201100%20x%20259>
>>>
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>><ma...@biosali><mailto:r.zaab
>>>oul@biosali<ma...@biosali>><mailto:r.zaabou<mailto:r.zaabou><
>>>mailto:r.zaabou<mailto:r.zaabou>>
>>>l@biosali>
>>>ne.org.ae<http://ne.org.ae><http://ne.org.ae><http://ne.org.ae><mailto:r
>>>.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<m
>>>ailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaaboul@biosaline
>>>.or<ma...@biosaline.or><mailto:r.zaaboul@biosaline.or<mailto:
>>>r.zaaboul@biosaline.or>><ma...@b><mailto:r
>>>.zaaboul@b<ma...@b>>
>>>iosaline.or>
>>>g.ae<http://g.ae><http://g.ae><http://g.ae><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:r.za
>>>aboul@bios><ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae>>>><mailto:r.zaabo
>>>ul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bi
>>>osal<ma...@biosal><mailto:r.zaaboul@biosal<mailto:r.zaaboul@b
>>>iosal>>
>>>ine.org.ae<http://ine.org.ae><http://ine.org.ae>>
>>><ma...@biosaline.org.ae><ma
>>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mail
>>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><ma
>>>ilto:r.zaaboul@biosaline.org.ae<mailto:ilto%3Ar.zaaboul@biosaline.org.ae
>>>><mailto:ilto%3Ar.zaaboul@biosaline.org.ae<mailto:ilto%253Ar.zaaboul@bio
>>>>saline.org.ae>><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@bios
>>>>aline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosal
>>>>ine.org.ae>>><mail
>>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><ma
>>>ilto:to%3Ar.zaaboul@biosaline.org.ae<mailto:to%253Ar.zaaboul@biosaline.o
>>>rg.ae>><mailto:to%3Ar.zaaboul@biosaline.org.ae<mailto:to%253Ar.zaaboul@b
>>>iosaline.org.ae><mailto:to%253Ar.zaaboul@biosaline.org.ae<mailto:to%2525
>>>3Ar.zaaboul@biosaline.org.ae>>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>><mailto:r.zaaboul<ma
>>>ilto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>>:r.zaaboul>
>>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><http
>>>://biosaline.org.ae><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@bio
>>>saline.org><mailto:r.zaaboul@biosaline.org<mailto:r.zaaboul@biosaline.or
>>>g>>
>>>.ae<ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>>>>
>>><ma...@bios><mailto:r.zaaboul@bios<mail
>>>to:r.zaaboul@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@bios>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><http://aline.org.
>>>ae><ma...@biosaline.org.ae>
>>><ma...@biosaline.org.ae>><m
>>>ailt
>>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>>to:o%3Ar.zaaboul@biosaline.org.ae<mailto:o%253Ar.zaaboul@biosaline.org.a
>>>e>>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mail
>>>to:r.zaa<mailto:r.zaa>><m
>>>ailto:r.zaa>
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:boul@biosalin
>>>e.org.ae<ma...@biosaline.org.ae>><mailto:boul@biosaline.org.ae<mai
>>>lto:boul@biosaline.org.ae><mailto:boul@biosaline.org.ae<mailto:boul@bios
>>>aline.org.ae>>><ma...@bios><mailto:r.za
>>>aboul@bios<ma...@bios>>
>>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:r.zaaboul@
>>>biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bio
>>>saline.org.ae<ma...@biosaline.org.ae>>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>Climate and Water Modeling Scientist
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mail
>>>to:r.za><mailto:r.za<mailto:r.za>>
>>>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:aboul@biosa
>>>line.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.o
>>>rg.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.
>>>ae<ma...@biosaline.org.ae>>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>--
>>>Rashyd Zaaboul
>>>
>>>Climate and Water Modeling Scientist
>>>
>>>International Center for Biosaline Agriculture
>>>P.O. Box 14660 Dubai, UAE
>>>Mobile : +971 50 675 2007
>>>Office : +971 4 336 1100 x 259
>>>
>>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.z
>>>aaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
>>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaabou
>>>l@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>>
>>>Please consider the environment before printing this e-mail
>>>
>>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaabo
>>ul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@b
>>iosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
>
>
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
Hi Cam,
Thanks for providing the patch. Is this be a permanent fix to this problem that can be included in the next OCW version?
Cheers,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: sigep311@gmail.com [sigep311@gmail.com] on behalf of Cameron Goodale [goodale@apache.org]
Sent: Monday, June 16, 2014 6:26 AM
To: dev@climate.apache.org
Subject: Re: failed to run rcmes following the step-by-step document
Rashyd,
You are correct that the RCMED was being called regardless of what the obsSource value was set to.
I have moved the code around a little bit and attached it here.
This updated copy should function properly without an internet connection to the RCMED required.
Best Regards,
Cameron
On Sun, Jun 15, 2014 at 9:53 PM, Rashyd ZAABOUL <za...@gmail.com>> wrote:
Hi all,
I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When the laptop is connected to internet it works but if I disconnect it and try to run rcmet again it gives this message:
Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
Traceback (most recent call last):
File "rcmet.py", line 299, in <module>
runUsingConfig(args.CONFIG)
File "rcmet.py", line 194, in runUsingConfig
params = db.get_parameters_metadata()
File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line 45, in get_parameters_metadata
string = urllib2.urlopen(url)
File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
response = self._open(req, data)
File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
'_open', req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
return self.do_open(httplib.HTTPConnection, req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
raise URLError(err)
urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
So why it's trying to connect to RCMED if my obsSource=1 ?
I've attached my rcmet.py
Thanks and regards
Rashyd
2014-06-03 1:16 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>>:
It's really nice to hear that it's useful for your research.
With best regards,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828<tel:310-206-2828>
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
Sent: Monday, June 02, 2014 10:08 PM
To: Mattmann, Chris A (3980)
Cc: Kim, Jinwon; sanjay@tropmet.res.in<ma...@tropmet.res.in>; ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Thank you Chris and many thanks to all your colleagues for their help. It's very useful tool and I keep sending requests to the mailing lists you mentioned.
Kim, I'll look at the code and try to use the function calc_pdf.
Thanks and best regards
Rashyd
2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <ch...@jpl.nasa.gov>>>:
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to dev@climate.apache.org<ma...@climate.apache.org>> and
including the mailing list as it really helps to show the activity
going on.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <za...@gmail.com>>>
Cc: Chris Mattmann <Ch...@jpl.nasa.gov>>>,
"sanjay@tropmet.res.in<ma...@tropmet.res.in>>" <sa...@tropmet.res.in>>>, "ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
<ra...@tropmet.res.in>>>, "Joyce, Michael J (398J)"
<Mi...@jpl.nasa.gov>>>, rcmes-dev <rc...@jpl.nasa.gov>>>,
"Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>>>,
"dev@climate.apache.org<ma...@climate.apache.org>>" <de...@climate.apache.org>>>, "Mcgibbney, Lewis J
(398J)" <Le...@jpl.nasa.gov>>>
Subject: RE: failed to run rcmes following the step-by-step document
>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828<tel:310-206-2828>
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J (398J); rcmes-dev; Goodale,
>Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828<tel:310-206-2828>
>________________________________________
>From: Mattmann, Chris A (3980)
>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>>>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL <za...@gmail.com>>>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu>>>>
>Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>>>"
><sa...@tropmet.res.in>>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in>>>"
><ra...@tropmet.res.in>>>>, "Joyce, Michael J
>(398J)"
><Mi...@jpl.nasa.gov>>>>,
>rcmes-dev
><rc...@jpl.nasa.gov>>>>, "Goodale,
>Cameron E (398J)"
><ca...@jpl.nasa.gov>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu>>>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>
>><ma...@tropmet.res.in>>>>; Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>><ma...@jpl.nasa>>.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atmos.ucla.edu>>>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atmos.ucla.edu>>>>; 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>> params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atmos.ucla.edu>>>>>;
>> 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc><http://198012.nc><http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc><http://199012.nc><http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc><http://200012.nc><http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc><http://200512.nc><http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc><http://98012.nc><http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc><http://99012.nc><http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc><http://00012.nc><http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc><http://00512.nc><http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>:
>>Hi Rashyd,
>>
>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I^1m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I^1ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550<tel:%28818%29%20354-7550>
>>Fax: (818) 393-1370<tel:%28818%29%20393-1370>
>>
>>
>>
>>From: Rashyd ZAABOUL
>><za...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>
>>Cc: rcmes-dev
>><rc...@j>>
>>pl.nasa.gov<ht...@jp>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jp>
>>l.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-<mailto:rcmes-><mailto:rcmes-<mailto:rcmes->>
>>dev@jpl.nasa.gov<ma...@jpl.na>>
>>sa.gov<http://sa.gov><http://sa.gov>><m
>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mail
>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-d<mailto:rcmes-d><mailto:rcmes-d<mailto:rcmes-d>><m
>>ailto:rcmes-d>
>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>,
>> JPL
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>> paramDict = simplejson.loads(httpRequest.text)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> return _default_decoder.decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> obj, end = self.raw_decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atm>>
>>os.ucla.edu<ht...@atm>>
>>os>
>>.ucla.edu<ht...@atmos>>.
>>ucla.edu<ht...@atmos.ucla.edu>>>>>>;
>> 310-206-2828<tel:310-206-2828>
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>rcmes-dev@jpl.nasa.gov<ma...@jp>>
>>l.nasa.gov<ht...@jpl>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jpl>
>>.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-dev<mailto:rcmes-dev><mailto:rcmes-dev<mailto:rcmes-dev>>
>>@jpl.nasa.gov<ht...@jpl.nasa>>.
>>gov><ma
>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-de<mailto:rcmes-de><mailto:rcmes-de<mailto:rcmes-de>><ma
>>ilto:rcmes-de>
>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>Office : +971 4 336 1100 x 259<tel:%2B971%204%20336%201100%20x%20259>
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosali>><mailto:r.zaabou<mailto:r.zaabou><mailto:r.zaabou<mailto:r.zaabou>>
>>l@biosali>
>>ne.org.ae<ht...@biosaline.org.ae>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@b>>
>>iosaline.or>
>>g.ae<ht...@bios>>
>>aline.org.ae<ht...@biosal>>
>>ine.org.ae<http://ine.org.ae><http://ine.org.ae>>
>><ma...@biosaline.org.ae>>>><ma
>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mail
>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007<tel:%2B971%2050%20675%202007>
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
Please consider the environment before printing this e-mail
Re: failed to run rcmes following the step-by-step document
Posted by Cameron Goodale <go...@apache.org>.
Rashyd,
You are correct that the RCMED was being called regardless of what the
obsSource value was set to.
I have moved the code around a little bit and attached it here.
This updated copy should function properly without an internet connection
to the RCMED required.
Best Regards,
Cameron
On Sun, Jun 15, 2014 at 9:53 PM, Rashyd ZAABOUL <za...@gmail.com> wrote:
> Hi all,
>
> I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When
> the laptop is connected to internet it works but if I disconnect it and try
> to run rcmet again it gives this message:
>
> Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
> Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.get_parameters_metadata()
> File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line
> 45, in get_parameters_metadata
> string = urllib2.urlopen(url)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
> return _opener.open(url, data, timeout)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
> response = self._open(req, data)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
> '_open', req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
> result = func(*args)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
> return self.do_open(httplib.HTTPConnection, req)
> File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
> raise URLError(err)
> urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
>
>
> So why it's trying to connect to RCMED if my obsSource=1 ?
> I've attached my rcmet.py
>
> Thanks and regards
> Rashyd
>
>
> 2014-06-03 1:16 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
>
>> It's really nice to hear that it's useful for your research.
>>
>> With best regards,
>>
>> -----------------------------------------------------------------
>> Jinwon Kim
>> Joint Institute for Regional Earth System Science and Engineering and
>> Dept. Atmospheric and Oceanic Sciences
>> University of California, Los Angeles
>> 607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> 90095-7228, USA
>> jkim@atmos.ucla.edu; 310-206-2828
>> ________________________________________
>> From: Rashyd ZAABOUL [zaaboul@gmail.com]
>> Sent: Monday, June 02, 2014 10:08 PM
>> To: Mattmann, Chris A (3980)
>> Cc: Kim, Jinwon; sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce,
>> Michael J (398J); rcmes-dev; Goodale, Cameron E (398J);
>> dev@climate.apache.org; Mcgibbney, Lewis J (398J)
>> Subject: Re: failed to run rcmes following the step-by-step document
>>
>> Thank you Chris and many thanks to all your colleagues for their help.
>> It's very useful tool and I keep sending requests to the mailing lists you
>> mentioned.
>>
>> Kim, I'll look at the code and try to use the function calc_pdf.
>>
>> Thanks and best regards
>> Rashyd
>>
>>
>> 2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <
>> chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>:
>> Thanks Guys. Rashyd, I just wanted to let you know to feel free to
>> keep sending any questions you have to dev@climate.apache.org<mailto:
>> dev@climate.apache.org> and
>> including the mailing list as it really helps to show the activity
>> going on.
>>
>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>> Chris Mattmann, Ph.D.
>> Chief Architect
>> Instrument Software and Science Data Systems Section (398)
>> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>> Office: 168-519, Mailstop: 168-5th floor
>> Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
>> WWW: http://sunset.usc.edu/~mattmann/
>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>> Adjunct Associate Professor, Computer Science Department
>> University of Southern California, Los Angeles, CA 90089 USA
>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>>
>>
>>
>>
>>
>>
>> -----Original Message-----
>> From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>
>> Date: Monday, June 2, 2014 7:56 AM
>> To: Rashyd ZAABOUL <za...@gmail.com>>
>> Cc: Chris Mattmann <Chris.A.Mattmann@jpl.nasa.gov<mailto:
>> Chris.A.Mattmann@jpl.nasa.gov>>,
>> "sanjay@tropmet.res.in<ma...@tropmet.res.in>" <
>> sanjay@tropmet.res.in<ma...@tropmet.res.in>>, "
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>"
>> <ra...@tropmet.res.in>>, "Joyce, Michael
>> J (398J)"
>> <Mi...@jpl.nasa.gov>>,
>> rcmes-dev <rc...@jpl.nasa.gov>>,
>> "Goodale, Cameron E (398J)" <cameron.e.goodale@jpl.nasa.gov<mailto:
>> cameron.e.goodale@jpl.nasa.gov>>,
>> "dev@climate.apache.org<ma...@climate.apache.org>" <
>> dev@climate.apache.org<ma...@climate.apache.org>>, "Mcgibbney,
>> Lewis J
>> (398J)" <Lewis.J.Mcgibbney@jpl.nasa.gov<mailto:
>> Lewis.J.Mcgibbney@jpl.nasa.gov>>
>> Subject: RE: failed to run rcmes following the step-by-step document
>>
>> >Glad to hear it works.
>> >
>> >pdf calculation is not included in the metrics menu at this time, but a
>> >routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>> >(e.g., model and observations) is available in the code. the routine is:
>> >'calc_pdf' in the code
>> >"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>> >
>> >to access/modify,
>> >(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>> >(2) edit the file 'metrics.py' using an editor, for example, "vi
>> >metrics.py",
>> >(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>> >
>> >if you are familiar with python, you may be able to use that routine to
>> >create an option to calculate pdf's (and cdf's). if you are not familiar
>> >with python, we can add it to the next release, but will take a few
>> weeks.
>> >
>> >
>> >Hope this is helpful.
>> >
>> >
>> >Best,
>> >
>> >-----------------------------------------------------------------
>> >Jinwon Kim
>> >Joint Institute for Regional Earth System Science and Engineering and
>> >Dept. Atmospheric and Oceanic Sciences
>> >University of California, Los Angeles
>> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >90095-7228, USA
>> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>> >________________________________________
>> >From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>> >Sent: Monday, June 02, 2014 3:50 AM
>> >To: Kim, Jinwon
>> >Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<mailto:
>> sanjay@tropmet.res.in>;
>> >ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
>> (398J); rcmes-dev; Goodale,
>> >Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>;
>> Mcgibbney, Lewis J (398J)
>> >Subject: Re: failed to run rcmes following the step-by-step document
>> >
>> >Hi all,
>> >It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>> >... Now I've two questions :
>> >- Is it possible to compute PDFs and CDFs and other metrics?
>> >- Is it possible to compute these metrics on other parameters such as 2m
>> >temperature, 500mb height, wind at different levels to compare with
>> >reanalysis for example?
>> >
>> >Best regards
>> >Rashyd
>> >
>> >
>> >2014-06-01 12:50 GMT-04:00 Kim, Jinwon
>> ><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>:
>> >The problem was the correct rcmet.py was not copied to
>> >"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>> >"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>> >will resolve this problem. I've always run rcmet from
>> >"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until
>> today.
>> >
>> >Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>> >the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>> >
>> >-----------------------------------------------------------------
>> >Jinwon Kim
>> >Joint Institute for Regional Earth System Science and Engineering and
>> >Dept. Atmospheric and Oceanic Sciences
>> >University of California, Los Angeles
>> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >90095-7228, USA
>> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>> >________________________________________
>> >From: Mattmann, Chris A (3980)
>> >[chris.a.mattmann@jpl.nasa.gov<mailto:chris.a.mattmann@jpl.nasa.gov
>> ><mailto:chris.a.mattmann@jpl.nasa.gov<mailto:
>> chris.a.mattmann@jpl.nasa.gov>>]
>> >Sent: Sunday, June 01, 2014 9:43 AM
>> >To: Rashyd ZAABOUL; Kim, Jinwon
>> >Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>> >ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J
>> >(398J); rcmes-dev; Goodale, Cameron E (398J);
>> >dev@climate.apache.org<ma...@climate.apache.org><mailto:
>> dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis
>> J
>> >(398J)
>> >Subject: Re: failed to run rcmes following the step-by-step document
>> >
>> >Hi Rashyd,
>> >
>> >I'm CC'ing the Apache list for the Open Climate Workbench project where
>> >we have a lot of eyes on the list. Maybe someone on the Apache list can
>> >help as well.
>> >
>> >Also we are happy to have a Skype/telecon with you this week to get
>> >your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>> >work with Rashyd to get his problem fixed.
>> >
>> >Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>> >Paul help out on this - they'll take it from here.
>> >
>> >Cheers,
>> >Chris
>> >
>> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>> >Chris Mattmann, Ph.D.
>> >Chief Architect
>> >Instrument Software and Science Data Systems Section (398)
>> >NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>> >Office: 168-519, Mailstop: 168-5th floor
>> >Email: chris.a.mattmann@nasa.gov<mailto:chris.a.mattmann@nasa.gov
>> ><ma...@nasa.gov>>
>> >WWW: http://sunset.usc.edu/~mattmann/
>> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>> >Adjunct Associate Professor, Computer Science Department
>> >University of Southern California, Los Angeles, CA 90089 USA
>> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>> >
>> >
>> >
>> >
>> >
>> >
>> >-----Original Message-----
>> >From: Rashyd ZAABOUL <zaaboul@gmail.com<mailto:zaaboul@gmail.com
>> ><ma...@gmail.com>>>
>> >Date: Sunday, June 1, 2014 2:31 AM
>> >To: "Kim, Jinwon (329M-Affiliate)"
>> ><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>
>> >Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> sanjay@tropmet.res.in<ma...@tropmet.res.in>>"
>> ><sa...@tropmet.res.in><mailto:
>> sanjay@tropmet.res.in<ma...@tropmet.res.in>>>,
>> >"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
>> ><ra...@tropmet.res.in><mailto:
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>>>, "Joyce, Michael
>> J
>> >(398J)"
>> ><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>>,
>> >rcmes-dev
>> ><rc...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>, "Goodale,
>> >Cameron E (398J)"
>> ><cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
>> ><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
>> cameron.e.goodale@jpl.nasa.gov>>>
>> >Subject: Re: failed to run rcmes following the step-by-step document
>> >
>> >>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>> >>contains params = db.getParams() on line 194 !!!
>> >>
>> >>
>> >>I've tried this tar file which is equal to the previous one (I've
>> >>modified the line 194 in rcmet.py) and I've got the same error:
>> >>
>> >>
>> >>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>> >>
>>
>> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>> >>L
>> >>atName,obsTimeName,obsTimestep,gridBox,models)
>> >>ValueError: too many values to unpack
>> >>
>> >>
>> >>
>> >>
>> >>Regards
>> >>Rashyd
>> >>
>> >>
>> >>
>> >>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>> >><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>:
>> >>
>> >>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>> >>tar file again. Please check this one out. Please clean up previous
>> >>versions and try the attached one with the included config file
>> >>(cordexMENA.cfg). This is the code/config file I used
>> >> to create the figures I sent in the earlier e-mail.
>> >>
>> >>For your error messages:
>> >>
>> >>(1) The parameter "obsSource" directs the code where to find observation
>> >>data for evaluation. "obsSource=1" is reserved for the case users
>> provide
>> >>their own observation data. If you set obsSource=1 and do not provide
>> >>data, it will result in error exit as the
>> >> code cannot find the observation data file(s) specified by the user.
>> >>Thus, unless you provide your own observation data, obsSource=1 must not
>> >>be used.
>> >>
>> >>(2) The exit message "No input observation data file. EXIT" occurs when
>> >>there is no observation data file id's are assigned when obsSource=0 is
>> >>set. This can happen if "obsParamId" in the config file is not properly
>> >>set. We don't expect any problems if obsParamId
>> >> is correctly set because the data specified by obsParamId are included
>> >>in the database (this requires active internet connection). Will you
>> send
>> >>me your configure file so that I can look at it?
>> >>
>> >>
>> >>
>> >>
>> >>Thanks for your patience.
>> >>
>> >>
>> >>-----------------------------------------------------------------
>> >>Jinwon Kim
>> >>Joint Institute for Regional Earth System Science and Engineering and
>> >>Dept. Atmospheric and Oceanic Sciences
>> >>University of California, Los Angeles
>> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >>90095-7228, USA
>> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>> >>________________________________________
>> >>From: Rashyd ZAABOUL [zaaboul@gmail.com<mailto:zaaboul@gmail.com
>> ><ma...@gmail.com>>]
>> >>
>> >>Sent: Saturday, May 31, 2014 11:58 PM
>> >>To: Kim, Jinwon
>> >>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>> >>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>>
>> >><ma...@tropmet.res.in><mailto:
>> ramarao@tropmet.res.in<ma...@tropmet.res.in>>>; Joyce,
>> >>Michael J
>> >>(398J); rcmes-dev;
>> >>cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
>> ><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
>> cameron.e.goodale@jpl.nasa.gov>>
>> >><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
>> cameron.e.goodale@jpl.nasa.gov><mailto:cameron.e.goodale@jpl.nasa<mailto:
>> cameron.e.goodale@jpl.nasa>.
>> >>gov>>
>> >>Subject: Re: failed to run rcmes following the step-by-step document
>> >>
>> >>
>> >>Hi Kim,
>> >>
>> >>Thank you for your help. I'm sorry but I'm getting confused with all
>> >>these different packages I received from you and your colleagues!. The
>> >>last one you just sent to me still contains params = db.getParams() in
>> >>rcmet.py at line 194. I've replaced this file
>> >> with the one sent by Cameron before and it seems to be ok. But when
>> I've
>> >>tried to reproduce the result you sent to me (with obsSource=1) I got
>> >>this error :
>> >>
>> >>...
>> >>data_prep is completed: both obs and mdl data are re-gridded to a common
>> >>analysis grid
>> >>Traceback (most recent call last):
>> >> File "rcmet.py", line 299, in <module>
>> >> runUsingConfig(args.CONFIG)
>> >> File "rcmet.py", line 237, in runUsingConfig
>> >>
>>
>> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>> >>L
>> >>atName,obsTimeName,obsTimestep,gridBox,models)
>> >>ValueError: too many values to unpack
>> >>
>> >>Do you know how can I fix this please?
>> >>
>> >>NOTE: with obsSource=0 I got :
>> >>No input observation data file. EXIT
>> >>
>> >>Thanks and regards
>> >>Rashyd
>> >>
>> >>
>> >>
>> >>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>> >><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
>> <ma...@atmos.ucla.e>
>> >>du<ma...@atmos.ucla.edu>>>>:
>> >>To all,
>> >>
>> >>*** Please update your RCMET with the attached version 2.1.3. ***
>> >>
>> >>I found that some files included in the earlier tar file for the release
>> >>version 2.1.3 have some critical issues. Now I've applied all fixes and
>> >>successfully ran a test case with a MENA domain dataset; the version
>> >>works properly now. I apologize for inconvenience.
>> >>
>> >>Rashyd:
>> >>Please see the two attached figures for the MENA domain (model bias,
>> GPCP
>> >>climatology for 1991-2000 over the MENA domain) for your reference. The
>> >>configure file for this processing is:
>> >>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>> >>domain has been adjusted to fit the MENA domain.
>> >>
>> >>
>> >>Aanjay and Rama:
>> >>The code also works fine with the India domain. The two attached figures
>> >>for the India domain shows the TRMM climatology for 98-2000 and the bias
>> >>of model ensemble against TRMM for the same period. The sample configure
>> >>file is: cordexIndia.cfg under resources/
>> >> (the same location as the MENA config file).
>> >>
>> >>Please contact me/mike/rcmes-dev if you have any questions.
>> >>
>> >>
>> >>With best regards,
>> >>-----------------------------------------------------------------
>> >>Jinwon Kim
>> >>Joint Institute for Regional Earth System Science and Engineering and
>> >>Dept. Atmospheric and Oceanic Sciences
>> >>University of California, Los Angeles
>> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >>90095-7228, USA
>> >>
>> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed>
>> >>u<ma...@atmos.ucla.edu>>>;
>> 310-206-2828
>> >>________________________________________
>> >>From: Rashyd ZAABOUL
>> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
>> zaaboul@gmail.com><mai
>> >>lto:zaaboul@gmail.com<ma...@gmail.com>>>]
>> >>
>> >>Sent: Thursday, May 29, 2014 12:07 AM
>> >>To: Kim, Jinwon
>> >>Cc: Joyce, Michael J (398J); rcmes-dev
>> >>Subject: Re: failed to run rcmes following the step-by-step document
>> >>
>> >>Hi Michael,
>> >>The package you've just sent to me contains the same rcmet.py as the
>> >>package 2.1.2 and has on line 194 :
>> >> params = db.getParams()
>> >>
>> >>Is it the right one? Because I'm still having the same error :
>> >>
>> >>Running using config file: ../rcmes/resources/cordexAF.cfg
>> >>Traceback (most recent call last):
>> >> File "rcmet.py", line 299, in <module>
>> >> runUsingConfig(args.CONFIG)
>> >> File "rcmet.py", line 194, in runUsingConfig
>> >> params = db.getParams()
>> >>AttributeError: 'module' object has no attribute 'getParams'
>> >>
>> >>I've attached one of the files that I'm trying to use.
>> >>
>> >>Thanks again
>> >>Rashyd
>> >>
>> >>
>> >>
>> >>
>> >>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>> >><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
>> <ma...@atmos.ucla.e>
>> >>du<ma...@atmos.ucla.edu>>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.ed>
>> >>u<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>>:
>> >>Here comes the attachment.
>> >>
>> >>-----------------------------------------------------------------
>> >>Jinwon Kim
>> >>Joint Institute for Regional Earth System Science and Engineering and
>> >>Dept. Atmospheric and Oceanic Sciences
>> >>University of California, Los Angeles
>> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >>90095-7228, USA
>> >>
>> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed>
>> >>u<ma...@atmos.ucla.edu>>><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.edu<http://os.ucla.edu>>
>> >><ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>;
>> >> 310-206-2828
>> >>________________________________________
>> >>From: Rashyd ZAABOUL
>> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
>> zaaboul@gmail.com><mai
>> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
>> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>
>> >>><mail
>> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
>> to%3Azaaboul@gmail.com<ma...@gmail.com>>>>]
>> >>
>> >>Sent: Wednesday, May 28, 2014 10:27 PM
>> >>To: Joyce, Michael J (398J)
>> >>Cc: Kim, Jinwon; rcmes-dev
>> >>Subject: Re: failed to run rcmes following the step-by-step document
>> >>
>> >>Hi Michael,
>> >>
>> >>With the new Jinwon's RCMET version 2.1.3 I got this error :
>> >>
>> >>Running using config file: ../rcmes/resources/cordexAF.cfg
>> >>Traceback (most recent call last):
>> >> File "rcmet.py", line 299, in <module>
>> >> runUsingConfig(args.CONFIG)
>> >> File "rcmet.py", line 194, in runUsingConfig
>> >> params = db.getParams()
>> >>AttributeError: 'module' object has no attribute 'getParams'
>> >>
>> >>My
>>
>> >>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>> >>m
>> >>es
>> >>
>> >>I'm using files for precipitation exactly as I download them from ESGF
>> >>portal for CORDEX MENA domain. The files I'm using are :
>> >>
>>
>> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>> >>-
>> >>198012.nc<http://198012.nc><http://198012.nc>
>>
>> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>> >>-
>> >>199012.nc<http://199012.nc><http://199012.nc>
>>
>> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>> >>-
>> >>200012.nc<http://200012.nc><http://200012.nc>
>>
>> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>> >>-
>> >>200512.nc<http://200512.nc><http://200512.nc>
>>
>> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>> >>2
>> >>.nc
>>
>> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>> >>2
>> >>.nc
>>
>> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>> >>2
>> >>.nc
>>
>> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>> >>2
>> >>.nc
>>
>> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>> >>1
>> >>98012.nc<http://98012.nc><http://98012.nc>
>>
>> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>> >>1
>> >>99012.nc<http://99012.nc><http://99012.nc>
>>
>> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>> >>2
>> >>00012.nc<http://00012.nc><http://00012.nc>
>>
>> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>> >>2
>> >>00512.nc<http://00512.nc><http://00512.nc>
>> >>
>> >>
>> >>Do I have to pre-process this data first before I can use it with RCMET
>> ?
>> >>
>> >>I've attached my config file to check if I'm missing something.
>> >>
>> >>Thanks for your help
>> >>
>> >>Rashyd
>> >>
>> >>
>> >>
>> >>
>> >>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto
>> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>><mailt
>> >>o:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>>><mailt
>> >>o:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>><mailto
>> >>:M<mailto:M<mailto:M>>
>> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>> Mi<mailto:Mi>
>> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>:
>> >>Hi Rashyd,
>> >>
>> >>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>> >>released a newer version that may resolve some of your problems. You can
>> >>find and download it at [1]. I^1m sure Jinwon will be able to help you
>> get
>> >>this resolved. Thank you for sending the
>> >> document you used. I^1ll be sure to get it and the website updated with
>> >>the correct information.
>> >>
>> >>[1]
>> >>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>> >><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>> >>
>> >>Thanks much!
>> >>
>> >>--
>> >>Michael J. Joyce
>> >>Engineering Applications Software Engineer
>> >>Instrument Software and Science Data Systems
>> >>NASA Jet Propulsion Laboratory
>> >>California Institute of Technology
>> >>4800 Oak Grove Drive
>> >>Pasadena, California 91109
>> >>Mail Stop: 158-242
>> >>Tel: (818) 354-7550
>> >>Fax: (818) 393-1370
>> >>
>> >>
>> >>
>> >>From: Rashyd ZAABOUL
>> >><za...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
>> zaaboul@gmail.com><mai
>> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
>> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>
>> >>><mail
>> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
>> to%3Azaaboul@gmail.com<ma...@gmail.com>>>><mailto:
>> zaaboul@gmai<ma...@gmai>
>> >>l.com<http://l.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>> >><ma...@gmail.com><mailto:zaaboul@g
>> <ma...@g>
>> >>mail.com<http://mail.com>>><
>> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
>> zaaboul@gmail.com<ma...@gmail.com>><mailto:zaaboul@gmail.c
>> <ma...@gmail.c>
>> >>om<ma...@gmail.com>>>>>>
>> >>Date: Wednesday, May 28, 2014 at 5:09 AM
>> >>
>> >>To: "Kim, Jinwon (329M-Affiliate)"
>> >><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
>> <ma...@atmos.ucla.e>
>> >>du<ma...@atmos.ucla.edu>>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.ed>
>> >>u<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@at<mailto:
>> jkim@at>
>> >>mos.ucla.edu<http://mos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>><ma...@atmo><mailto:jkim@atm
>> <ma...@atm>
>> >>o>
>> >>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.edu<http://os.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>>>>>>
>> >>Cc: rcmes-dev
>> >><rc...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@j
>> <ma...@j>
>> >>pl.nasa.gov<http://pl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
>> rcmes-dev@jpl.nasa.gov>>><mailto:rcmes-dev@jp<mailto:rcmes-dev@jp
>> ><mailto:rc<mailto:rc>
>> >>mes-dev@jp>
>> >>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-
>> <mailto:rcmes->
>> >>dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.na<ma...@jpl.na>
>> >>sa.gov<http://sa.gov>><m
>> >>ailto:rcmes-dev@jpl.nasa.gov<mailto:ailto%3Arcmes-dev@jpl.nasa.gov
>> ><mailto:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:
>> ailto%253Arcmes-dev@jpl.nasa.gov>>><mail
>> >>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-d
>> <mailto:rcmes-d><m
>> >>ailto:rcmes-d>
>> >>ev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ev@jpl.nasa.gov<mailto:
>> ev@jpl.nasa.gov>>>>>>,
>> >> JPL
>> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto
>> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>><mailt
>> >>o:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>>><mailt
>> >>o:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >><mailto:
>> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
>> >>><mailto
>> >>:M<mailto:M<mailto:M>>
>> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>> Mi<mailto:Mi>
>> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
>> >>Subject: Re: failed to run rcmes following the step-by-step document
>> >>
>> >>Hi Jim and Michael,
>> >>
>> >>I've modified the script
>> >>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>> >>json.loads function by simplejson.loads one to get more details on the
>> >>error and this is what I got :
>> >>
>> >>Running using config file: ../rcmes/resources/mena.cfg
>> >>Traceback (most recent call last):
>> >> File "rcmet.py", line 299, in <module>
>> >> runUsingConfig(args.CONFIG)
>> >> File "rcmet.py", line 194, in runUsingConfig
>> >> params = db.getParams()
>> >> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>> >>line 27, in getParams
>> >> paramDict = simplejson.loads(httpRequest.text)
>> >> File
>>
>> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>> >>l
>> >>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> >> return _default_decoder.decode(s)
>> >> File
>>
>> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>> >>l
>> >>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> >> obj, end = self.raw_decode(s)
>> >> File
>>
>> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>> >>l
>> >>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> >> return self.scan_once(s, idx=_w(s, idx).end())
>> >>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>> >>(char 0)
>> >>
>> >>What does this error mean ? I'm afraid the database RCMED is down while
>> >>I'm trying to get data out of it !
>> >>
>> >>Best regards
>> >>Rashyd
>> >>
>> >>
>> >>
>> >>
>> >>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>> >><jk...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
>> <ma...@atmos.ucla.e>
>> >>du<ma...@atmos.ucla.edu>>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.ed>
>> >>u<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@at<mailto:
>> jkim@at>
>> >>mos.ucla.edu<http://mos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>><ma...@atmo><mailto:jkim@atm
>> <ma...@atm>
>> >>o>
>> >>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.edu<http://os.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>>>>>>:
>> >>Thanks for your interests.
>> >>
>> >>For organizing your data:
>> >>
>> >>You can put your model data in your own directory. Then specify the link
>> >>to the data (or data files) in the configure file, [MODEL] block. The
>> >>code currently takes netcdf format files for input.
>> >>
>> >>If you use the observed data in the RCMES database, just specify the
>> >>parameter numbers in the [RCMED] block, also in the configure file. If
>> >>you use your own observation data, you can specify it in the same block
>> >>(it also takes netcdf-format files).
>> >>
>> >>Hope this helps.
>> >>
>> >>
>> >>With best regards,
>> >>
>> >>-----------------------------------------------------------------
>> >>Jinwon Kim
>> >>Joint Institute for Regional Earth System Science and Engineering and
>> >>Dept. Atmospheric and Oceanic Sciences
>> >>University of California, Los Angeles
>> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>> >>90095-7228, USA
>> >>
>> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:
>> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed>
>> >>u<ma...@atmos.ucla.edu>>><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
>> jkim@atm>
>> >>os.ucla.edu<http://os.ucla.edu>>
>> >><ma...@atmos.ucla.edu><mailto:
>> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atm
>> <ma...@atm>
>> >>os.ucla.edu<http://os.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>><ma...@atmos><mailto:
>> jkim@atm<ma...@atm>
>> >>os>
>> >>.ucla.edu<http://ucla.edu><http://ucla.edu>><mailto:jkim@atmos.ucla.edu
>> <ma...@atmos>.
>> >>ucla.edu<http://ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
>> jkim@atmos.ucla.edu>>>>>;
>> >> 310-206-2828
>> >>________________________________________
>> >>From: Rashyd ZAABOUL
>> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
>> zaaboul@gmail.com><mai
>> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
>> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
>> <ma...@gmail.com>
>> >>><mail
>> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
>> to%3Azaaboul@gmail.com<ma...@gmail.com>>>><mailto:
>> zaaboul@gmai<ma...@gmai>
>> >>l.com<http://l.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>> >><ma...@gmail.com><mailto:zaaboul@g
>> <ma...@g>
>> >>mail.com<http://mail.com>>><
>> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
>> zaaboul@gmail.com<ma...@gmail.com>><mailto:zaaboul@gmail.c
>> <ma...@gmail.c>
>> >>om<ma...@gmail.com>>>>>]
>> >>Sent: Tuesday, May 27, 2014 7:59 AM
>> >>
>> >>To:
>> >>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>> rcmes-dev@jp<ma...@jp>
>> >>l.nasa.gov<http://l.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
>> rcmes-dev@jpl.nasa.gov>>><mailto:rcmes-dev@jpl<mailto:rcmes-dev@jpl
>> ><mailto:rc<mailto:rc>
>> >>mes-dev@jpl>
>> >>.nasa.gov<http://nasa.gov><http://nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev
>> <mailto:rcmes-dev>
>> >>@jpl.nasa.gov<http://jpl.nasa.gov>>>><mailto:rcmes-dev@jpl.nasa.gov
>> <ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa<mailto:
>> rcmes-dev@jpl.nasa>.
>> >>gov><ma
>> >>ilto:rcmes-dev@jpl.nasa.gov<mailto:ilto%3Arcmes-dev@jpl.nasa.gov
>> ><mailto:ilto%3Arcmes-dev@jpl.nasa.gov<mailto:
>> ilto%253Arcmes-dev@jpl.nasa.gov>>><mailto
>> >>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-de
>> <mailto:rcmes-de><ma
>> >>ilto:rcmes-de>
>> >>v@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:v@jpl.nasa.gov<mailto:
>> v@jpl.nasa.gov>>>>>
>> >>Subject: failed to run rcmes following the step-by-step document
>> >>
>> >>Hi
>> >>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>> >>TRMM ... I followed the step-by-step document but it seems that
>> something
>> >>is missing there. For example it doesn't tell how to organize my data?
>> >>where to put the observations ...
>> >>
>> >>Could you please provide me with any useful documentation that can help
>> >>me setup RCMES to evaluate those models?
>> >>
>> >>Thanks
>> >>Rashyd
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>Climate and Water Modeling Scientist
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.za<mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
>> r.zaa<mailto:r.zaa><m
>> >>ailto:r.zaa>
>> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.zaaboul@bios<ma...@bios>
>> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
>> ><mailto
>> >>:r.zaaboul>
>> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
>> ><ma...@biosaline.org>
>> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
>> >>><ma...@bios><mailto:r.za<mailto:r.za>
>> >>aboul@bios>
>> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
>> >>o:r.zaaboul@biosaline.org.ae<mailto:o%3Ar.zaaboul@biosaline.org.ae
>> >>>>><ma...@biosali><mailto:r.zaabou
>> <mailto:r.zaabou>
>> >>l@biosali>
>> >>ne.org.ae<http://ne.org.ae><http://ne.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>> <mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
>> r.zaaboul@biosaline.or<ma...@biosaline.or><mailto:r.zaaboul@b
>> <ma...@b>
>> >>iosaline.or>
>> >>g.ae<http://g.ae><http://g.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae><mailto:r.zaaboul@bios<mailto:
>> r.zaaboul@bios>
>> >>aline.org.ae<http://aline.org.ae>>>><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae><mailto:r.zaaboul@biosal<mailto:
>> r.zaaboul@biosal>
>> >>ine.org.ae<http://ine.org.ae>>
>> >><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
>> ><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
>> >>><ma
>> >>ilto:r.zaaboul@biosaline.org.ae<mailto:
>> ilto%3Ar.zaaboul@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae>><mail
>> >>to:r.zaaboul@biosaline.org.ae<mailto:to%3Ar.zaaboul@biosaline.org.ae
>> ><mailto:to%3Ar.zaaboul@biosaline.org.ae<mailto:
>> to%253Ar.zaaboul@biosaline.org.ae>>>>>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>Climate and Water Modeling Scientist
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.za<mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
>> r.zaa<mailto:r.zaa><m
>> >>ailto:r.zaa>
>> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.zaaboul@bios<ma...@bios>
>> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
>> ><mailto
>> >>:r.zaaboul>
>> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
>> ><ma...@biosaline.org>
>> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
>> >>><ma...@bios><mailto:r.za<mailto:r.za>
>> >>aboul@bios>
>> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
>> >>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>Climate and Water Modeling Scientist
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.za<mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
>> r.zaa<mailto:r.zaa><m
>> >>ailto:r.zaa>
>> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.zaaboul@bios<ma...@bios>
>> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
>> ><mailto
>> >>:r.zaaboul>
>> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
>> ><ma...@biosaline.org>
>> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
>> >>><ma...@bios><mailto:r.za<mailto:r.za>
>> >>aboul@bios>
>> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
>> >>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>Climate and Water Modeling Scientist
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.za<mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
>> r.zaa<mailto:r.zaa><m
>> >>ailto:r.zaa>
>> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.zaaboul@bios<ma...@bios>
>> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
>> <ma...@biosaline.org.ae>>>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>Climate and Water Modeling Scientist
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
>> r.za<mailto:r.za>
>> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>--
>> >>Rashyd Zaaboul
>> >>
>> >>Climate and Water Modeling Scientist
>> >>
>> >>International Center for Biosaline Agriculture
>> >>P.O. Box 14660 Dubai, UAE
>> >>Mobile : +971 50 675 2007
>> >>Office : +971 4 336 1100 x 259
>> >>
>> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>> >>
>> >>Please consider the environment before printing this e-mail
>> >>
>> >>
>> >
>> >
>> >
>> >
>> >--
>> >Rashyd Zaaboul
>> >Climate and Water Modeling Scientist
>> >International Center for Biosaline Agriculture
>> >P.O. Box 14660 Dubai, UAE
>> >Mobile : +971 50 675 2007
>> >Office : +971 4 336 1100 x 259
>> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>> >
>> >Please consider the environment before printing this e-mail
>>
>>
>>
>>
>> --
>> Rashyd Zaaboul
>> Climate and Water Modeling Scientist
>> International Center for Biosaline Agriculture
>> P.O. Box 14660 Dubai, UAE
>> Mobile : +971 50 675 2007
>> Office : +971 4 336 1100 x 259
>> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>>
>> Please consider the environment before printing this e-mail
>>
>
>
>
> --
> Rashyd Zaaboul
> *Climate and Water Modeling Scientist*
> International Center for Biosaline Agriculture
> P.O. Box 14660 Dubai, UAE
> Mobile : +971 50 675 2007
> Office : +971 4 336 1100 x 259
> r.zaaboul@biosaline.org.ae
>
> *Please consider the environment before printing this e-mail*
>
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
The current version requires internet connection regardless of the source of obs data. This has been a known inconvenience and our OCW staff has been discussing a more generalized solution to this limitation. Please try the patch provided by Cam. He had a solution that worked before - looks like the patch is finally ready for release.
Hope this helps.
With best regards,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com]
Sent: Sunday, June 15, 2014 9:53 PM
To: Kim, Jinwon
Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Hi all,
I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When the laptop is connected to internet it works but if I disconnect it and try to run rcmet again it gives this message:
Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
Traceback (most recent call last):
File "rcmet.py", line 299, in <module>
runUsingConfig(args.CONFIG)
File "rcmet.py", line 194, in runUsingConfig
params = db.get_parameters_metadata()
File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line 45, in get_parameters_metadata
string = urllib2.urlopen(url)
File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
response = self._open(req, data)
File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
'_open', req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
return self.do_open(httplib.HTTPConnection, req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
raise URLError(err)
urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
So why it's trying to connect to RCMED if my obsSource=1 ?
I've attached my rcmet.py
Thanks and regards
Rashyd
2014-06-03 1:16 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>>:
It's really nice to hear that it's useful for your research.
With best regards,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
Sent: Monday, June 02, 2014 10:08 PM
To: Mattmann, Chris A (3980)
Cc: Kim, Jinwon; sanjay@tropmet.res.in<ma...@tropmet.res.in>; ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Thank you Chris and many thanks to all your colleagues for their help. It's very useful tool and I keep sending requests to the mailing lists you mentioned.
Kim, I'll look at the code and try to use the function calc_pdf.
Thanks and best regards
Rashyd
2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <ch...@jpl.nasa.gov>>>:
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to dev@climate.apache.org<ma...@climate.apache.org>> and
including the mailing list as it really helps to show the activity
going on.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <za...@gmail.com>>>
Cc: Chris Mattmann <Ch...@jpl.nasa.gov>>>,
"sanjay@tropmet.res.in<ma...@tropmet.res.in>>" <sa...@tropmet.res.in>>>, "ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
<ra...@tropmet.res.in>>>, "Joyce, Michael J (398J)"
<Mi...@jpl.nasa.gov>>>, rcmes-dev <rc...@jpl.nasa.gov>>>,
"Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>>>,
"dev@climate.apache.org<ma...@climate.apache.org>>" <de...@climate.apache.org>>>, "Mcgibbney, Lewis J
(398J)" <Le...@jpl.nasa.gov>>>
Subject: RE: failed to run rcmes following the step-by-step document
>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J (398J); rcmes-dev; Goodale,
>Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828
>________________________________________
>From: Mattmann, Chris A (3980)
>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>>>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL <za...@gmail.com>>>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu>>>>
>Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>>>"
><sa...@tropmet.res.in>>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in>>>"
><ra...@tropmet.res.in>>>>, "Joyce, Michael J
>(398J)"
><Mi...@jpl.nasa.gov>>>>,
>rcmes-dev
><rc...@jpl.nasa.gov>>>>, "Goodale,
>Cameron E (398J)"
><ca...@jpl.nasa.gov>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu>>>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in>>>
>><ma...@tropmet.res.in>>>>; Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>>
>><ma...@jpl.nasa>>.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atmos.ucla.edu>>>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atmos.ucla.edu>>>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>> params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atmos.ucla.edu>>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc><http://198012.nc><http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc><http://199012.nc><http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc><http://200012.nc><http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc><http://200512.nc><http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc><http://98012.nc><http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc><http://99012.nc><http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc><http://00012.nc><http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc><http://00512.nc><http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>:
>>Hi Rashyd,
>>
>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I^1m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I^1ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550
>>Fax: (818) 393-1370
>>
>>
>>
>>From: Rashyd ZAABOUL
>><za...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>
>>Cc: rcmes-dev
>><rc...@j>>
>>pl.nasa.gov<ht...@jp>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jp>
>>l.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-<mailto:rcmes-><mailto:rcmes-<mailto:rcmes->>
>>dev@jpl.nasa.gov<ma...@jpl.na>>
>>sa.gov<http://sa.gov><http://sa.gov>><m
>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mail
>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-d<mailto:rcmes-d><mailto:rcmes-d<mailto:rcmes-d>><m
>>ailto:rcmes-d>
>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>,
>> JPL
>><Mi...@jpl.nasa.gov>>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:M<mailto:M<mailto:M><mailto:M<mailto:M>>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:Mi<mailto:Mi><mailto:Mi<mailto:Mi>>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>> paramDict = simplejson.loads(httpRequest.text)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> return _default_decoder.decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> obj, end = self.raw_decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><jk...@atmos.ucla.e>>
>>du<ma...@atm>>
>>os.ucla.ed>
>>u<ma...@at>>
>>mos.ucla.edu<ht...@atm>>
>>o>
>>s.ucla.edu<ht...@atm>>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>>
>>u<ma...@atm>>
>>os.ucla.edu<http://os.ucla.edu><http://os.ucla.edu>>
>><ma...@atm>>
>>os.ucla.edu<ht...@atm>>
>>os>
>>.ucla.edu<ht...@atmos>>.
>>ucla.edu<ht...@atmos.ucla.edu>>>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com>><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>>
>>l.com<ht...@g>>
>>mail.com<http://mail.com><http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>>
>>om<ma...@gmail.com>>>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>rcmes-dev@jpl.nasa.gov<ma...@jp>>
>>l.nasa.gov<ht...@jpl>><mailto:rc<mailto:rc><mailto:rc<mailto:rc>>
>>mes-dev@jpl>
>>.nasa.gov<ht...@jpl.nasa.gov>><mailto:rcmes-dev<mailto:rcmes-dev><mailto:rcmes-dev<mailto:rcmes-dev>>
>>@jpl.nasa.gov<ht...@jpl.nasa>>.
>>gov><ma
>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto
>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:rcmes-de<mailto:rcmes-de><mailto:rcmes-de<mailto:rcmes-de>><ma
>>ilto:rcmes-de>
>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosali>><mailto:r.zaabou<mailto:r.zaabou><mailto:r.zaabou<mailto:r.zaabou>>
>>l@biosali>
>>ne.org.ae<ht...@biosaline.org.ae>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@b>>
>>iosaline.or>
>>g.ae<ht...@bios>>
>>aline.org.ae<ht...@biosal>>
>>ine.org.ae<http://ine.org.ae><http://ine.org.ae>>
>><ma...@biosaline.org.ae>>>><ma
>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mail
>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto:r.zaaboul<mailto:r.zaaboul>><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>>
>>.ae<ma...@bios>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae>><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>><mailto:r.zaa<mailto:r.zaa><mailto:r.zaa<mailto:r.zaa>><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>>
>>aline.org.ae<ht...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.za<mailto:r.za><mailto:r.za<mailto:r.za>>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
Please consider the environment before printing this e-mail
Re: failed to run rcmes following the step-by-step document
Posted by Rashyd ZAABOUL <za...@gmail.com>.
Hi all,
I'm using rcmet2.1.3 with local observations data set (ERA-Interim). When
the laptop is connected to internet it works but if I disconnect it and try
to run rcmet again it gives this message:
Running using config file: ../rcmes/resources/cordexMENA_Z500_ERAI.cfg
Traceback (most recent call last):
File "rcmet.py", line 299, in <module>
runUsingConfig(args.CONFIG)
File "rcmet.py", line 194, in runUsingConfig
params = db.get_parameters_metadata()
File "/home/mawred/rcmet/src/main/python/rcmes/storage/rcmed.py", line
45, in get_parameters_metadata
string = urllib2.urlopen(url)
File "/root/anaconda/lib/python2.7/urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "/root/anaconda/lib/python2.7/urllib2.py", line 404, in open
response = self._open(req, data)
File "/root/anaconda/lib/python2.7/urllib2.py", line 422, in _open
'_open', req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1214, in http_open
return self.do_open(httplib.HTTPConnection, req)
File "/root/anaconda/lib/python2.7/urllib2.py", line 1184, in do_open
raise URLError(err)
urllib2.URLError: <urlopen error [Errno -2] Name or service not known>
So why it's trying to connect to RCMED if my obsSource=1 ?
I've attached my rcmet.py
Thanks and regards
Rashyd
2014-06-03 1:16 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
> It's really nice to hear that it's useful for your research.
>
> With best regards,
>
> -----------------------------------------------------------------
> Jinwon Kim
> Joint Institute for Regional Earth System Science and Engineering and
> Dept. Atmospheric and Oceanic Sciences
> University of California, Los Angeles
> 607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> 90095-7228, USA
> jkim@atmos.ucla.edu; 310-206-2828
> ________________________________________
> From: Rashyd ZAABOUL [zaaboul@gmail.com]
> Sent: Monday, June 02, 2014 10:08 PM
> To: Mattmann, Chris A (3980)
> Cc: Kim, Jinwon; sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce,
> Michael J (398J); rcmes-dev; Goodale, Cameron E (398J);
> dev@climate.apache.org; Mcgibbney, Lewis J (398J)
> Subject: Re: failed to run rcmes following the step-by-step document
>
> Thank you Chris and many thanks to all your colleagues for their help.
> It's very useful tool and I keep sending requests to the mailing lists you
> mentioned.
>
> Kim, I'll look at the code and try to use the function calc_pdf.
>
> Thanks and best regards
> Rashyd
>
>
> 2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <
> chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>:
> Thanks Guys. Rashyd, I just wanted to let you know to feel free to
> keep sending any questions you have to dev@climate.apache.org<mailto:
> dev@climate.apache.org> and
> including the mailing list as it really helps to show the activity
> going on.
>
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Chris Mattmann, Ph.D.
> Chief Architect
> Instrument Software and Science Data Systems Section (398)
> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
> Office: 168-519, Mailstop: 168-5th floor
> Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
> WWW: http://sunset.usc.edu/~mattmann/
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Adjunct Associate Professor, Computer Science Department
> University of Southern California, Los Angeles, CA 90089 USA
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
> -----Original Message-----
> From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>
> Date: Monday, June 2, 2014 7:56 AM
> To: Rashyd ZAABOUL <za...@gmail.com>>
> Cc: Chris Mattmann <Chris.A.Mattmann@jpl.nasa.gov<mailto:
> Chris.A.Mattmann@jpl.nasa.gov>>,
> "sanjay@tropmet.res.in<ma...@tropmet.res.in>" <
> sanjay@tropmet.res.in<ma...@tropmet.res.in>>, "
> ramarao@tropmet.res.in<ma...@tropmet.res.in>"
> <ra...@tropmet.res.in>>, "Joyce, Michael
> J (398J)"
> <Mi...@jpl.nasa.gov>>,
> rcmes-dev <rc...@jpl.nasa.gov>>,
> "Goodale, Cameron E (398J)" <cameron.e.goodale@jpl.nasa.gov<mailto:
> cameron.e.goodale@jpl.nasa.gov>>,
> "dev@climate.apache.org<ma...@climate.apache.org>" <
> dev@climate.apache.org<ma...@climate.apache.org>>, "Mcgibbney, Lewis
> J
> (398J)" <Lewis.J.Mcgibbney@jpl.nasa.gov<mailto:
> Lewis.J.Mcgibbney@jpl.nasa.gov>>
> Subject: RE: failed to run rcmes following the step-by-step document
>
> >Glad to hear it works.
> >
> >pdf calculation is not included in the metrics menu at this time, but a
> >routine to calculate 'pdf skill score', i.e., an area common to two pdfs
> >(e.g., model and observations) is available in the code. the routine is:
> >'calc_pdf' in the code
> >"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
> >
> >to access/modify,
> >(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
> >(2) edit the file 'metrics.py' using an editor, for example, "vi
> >metrics.py",
> >(3) look for 'def calc_pdf(dataset_1, dataset_2):'
> >
> >if you are familiar with python, you may be able to use that routine to
> >create an option to calculate pdf's (and cdf's). if you are not familiar
> >with python, we can add it to the next release, but will take a few weeks.
> >
> >
> >Hope this is helpful.
> >
> >
> >Best,
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
> >Sent: Monday, June 02, 2014 3:50 AM
> >To: Kim, Jinwon
> >Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<mailto:
> sanjay@tropmet.res.in>;
> >ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
> (398J); rcmes-dev; Goodale,
> >Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>;
> Mcgibbney, Lewis J (398J)
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi all,
> >It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
> >... Now I've two questions :
> >- Is it possible to compute PDFs and CDFs and other metrics?
> >- Is it possible to compute these metrics on other parameters such as 2m
> >temperature, 500mb height, wind at different levels to compare with
> >reanalysis for example?
> >
> >Best regards
> >Rashyd
> >
> >
> >2014-06-01 12:50 GMT-04:00 Kim, Jinwon
> ><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>:
> >The problem was the correct rcmet.py was not copied to
> >"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
> >"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
> >will resolve this problem. I've always run rcmet from
> >"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
> >
> >Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
> >the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
> >________________________________________
> >From: Mattmann, Chris A (3980)
> >[chris.a.mattmann@jpl.nasa.gov<mailto:chris.a.mattmann@jpl.nasa.gov
> ><mailto:chris.a.mattmann@jpl.nasa.gov<mailto:
> chris.a.mattmann@jpl.nasa.gov>>]
> >Sent: Sunday, June 01, 2014 9:43 AM
> >To: Rashyd ZAABOUL; Kim, Jinwon
> >Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
> sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
> >ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
> ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J
> >(398J); rcmes-dev; Goodale, Cameron E (398J);
> >dev@climate.apache.org<ma...@climate.apache.org><mailto:
> dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J
> >(398J)
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi Rashyd,
> >
> >I'm CC'ing the Apache list for the Open Climate Workbench project where
> >we have a lot of eyes on the list. Maybe someone on the Apache list can
> >help as well.
> >
> >Also we are happy to have a Skype/telecon with you this week to get
> >your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
> >work with Rashyd to get his problem fixed.
> >
> >Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
> >Paul help out on this - they'll take it from here.
> >
> >Cheers,
> >Chris
> >
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >Chris Mattmann, Ph.D.
> >Chief Architect
> >Instrument Software and Science Data Systems Section (398)
> >NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
> >Office: 168-519, Mailstop: 168-5th floor
> >Email: chris.a.mattmann@nasa.gov<mailto:chris.a.mattmann@nasa.gov
> ><ma...@nasa.gov>>
> >WWW: http://sunset.usc.edu/~mattmann/
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >Adjunct Associate Professor, Computer Science Department
> >University of Southern California, Los Angeles, CA 90089 USA
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >
> >
> >
> >
> >
> >
> >-----Original Message-----
> >From: Rashyd ZAABOUL <za...@gmail.com><mailto:
> zaaboul@gmail.com<ma...@gmail.com>>>
> >Date: Sunday, June 1, 2014 2:31 AM
> >To: "Kim, Jinwon (329M-Affiliate)"
> ><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>
> >Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
> sanjay@tropmet.res.in<ma...@tropmet.res.in>>"
> ><sa...@tropmet.res.in><mailto:
> sanjay@tropmet.res.in<ma...@tropmet.res.in>>>,
> >"ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
> ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
> ><ra...@tropmet.res.in><mailto:
> ramarao@tropmet.res.in<ma...@tropmet.res.in>>>, "Joyce, Michael J
> >(398J)"
> ><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>>,
> >rcmes-dev
> ><rc...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>, "Goodale,
> >Cameron E (398J)"
> ><cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
> ><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
> cameron.e.goodale@jpl.nasa.gov>>>
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
> >>contains params = db.getParams() on line 194 !!!
> >>
> >>
> >>I've tried this tar file which is equal to the previous one (I've
> >>modified the line 194 in rcmet.py) and I've got the same error:
> >>
> >>
> >>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
> >>
> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
> >>L
> >>atName,obsTimeName,obsTimestep,gridBox,models)
> >>ValueError: too many values to unpack
> >>
> >>
> >>
> >>
> >>Regards
> >>Rashyd
> >>
> >>
> >>
> >>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>:
> >>
> >>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
> >>tar file again. Please check this one out. Please clean up previous
> >>versions and try the attached one with the included config file
> >>(cordexMENA.cfg). This is the code/config file I used
> >> to create the figures I sent in the earlier e-mail.
> >>
> >>For your error messages:
> >>
> >>(1) The parameter "obsSource" directs the code where to find observation
> >>data for evaluation. "obsSource=1" is reserved for the case users provide
> >>their own observation data. If you set obsSource=1 and do not provide
> >>data, it will result in error exit as the
> >> code cannot find the observation data file(s) specified by the user.
> >>Thus, unless you provide your own observation data, obsSource=1 must not
> >>be used.
> >>
> >>(2) The exit message "No input observation data file. EXIT" occurs when
> >>there is no observation data file id's are assigned when obsSource=0 is
> >>set. This can happen if "obsParamId" in the config file is not properly
> >>set. We don't expect any problems if obsParamId
> >> is correctly set because the data specified by obsParamId are included
> >>in the database (this requires active internet connection). Will you send
> >>me your configure file so that I can look at it?
> >>
> >>
> >>
> >>
> >>Thanks for your patience.
> >>
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL [zaaboul@gmail.com<mailto:zaaboul@gmail.com
> ><ma...@gmail.com>>]
> >>
> >>Sent: Saturday, May 31, 2014 11:58 PM
> >>To: Kim, Jinwon
> >>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in><mailto:
> sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
> >>ramarao@tropmet.res.in<ma...@tropmet.res.in><mailto:
> ramarao@tropmet.res.in<ma...@tropmet.res.in>>
> >><ma...@tropmet.res.in><mailto:
> ramarao@tropmet.res.in<ma...@tropmet.res.in>>>; Joyce,
> >>Michael J
> >>(398J); rcmes-dev;
> >>cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.gov
> ><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
> cameron.e.goodale@jpl.nasa.gov>>
> >><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:
> cameron.e.goodale@jpl.nasa.gov><mailto:cameron.e.goodale@jpl.nasa<mailto:
> cameron.e.goodale@jpl.nasa>.
> >>gov>>
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>
> >>Hi Kim,
> >>
> >>Thank you for your help. I'm sorry but I'm getting confused with all
> >>these different packages I received from you and your colleagues!. The
> >>last one you just sent to me still contains params = db.getParams() in
> >>rcmet.py at line 194. I've replaced this file
> >> with the one sent by Cameron before and it seems to be ok. But when I've
> >>tried to reproduce the result you sent to me (with obsSource=1) I got
> >>this error :
> >>
> >>...
> >>data_prep is completed: both obs and mdl data are re-gridded to a common
> >>analysis grid
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 237, in runUsingConfig
> >>
> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
> >>L
> >>atName,obsTimeName,obsTimestep,gridBox,models)
> >>ValueError: too many values to unpack
> >>
> >>Do you know how can I fix this please?
> >>
> >>NOTE: with obsSource=0 I got :
> >>No input observation data file. EXIT
> >>
> >>Thanks and regards
> >>Rashyd
> >>
> >>
> >>
> >>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
> <ma...@atmos.ucla.e>
> >>du<ma...@atmos.ucla.edu>>>>:
> >>To all,
> >>
> >>*** Please update your RCMET with the attached version 2.1.3. ***
> >>
> >>I found that some files included in the earlier tar file for the release
> >>version 2.1.3 have some critical issues. Now I've applied all fixes and
> >>successfully ran a test case with a MENA domain dataset; the version
> >>works properly now. I apologize for inconvenience.
> >>
> >>Rashyd:
> >>Please see the two attached figures for the MENA domain (model bias, GPCP
> >>climatology for 1991-2000 over the MENA domain) for your reference. The
> >>configure file for this processing is:
> >>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
> >>domain has been adjusted to fit the MENA domain.
> >>
> >>
> >>Aanjay and Rama:
> >>The code also works fine with the India domain. The two attached figures
> >>for the India domain shows the TRMM climatology for 98-2000 and the bias
> >>of model ensemble against TRMM for the same period. The sample configure
> >>file is: cordexIndia.cfg under resources/
> >> (the same location as the MENA config file).
> >>
> >>Please contact me/mike/rcmes-dev if you have any questions.
> >>
> >>
> >>With best regards,
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed
> <ma...@atmos.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>>; 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com><mai
> >>lto:zaaboul@gmail.com<ma...@gmail.com>>>]
> >>
> >>Sent: Thursday, May 29, 2014 12:07 AM
> >>To: Kim, Jinwon
> >>Cc: Joyce, Michael J (398J); rcmes-dev
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Michael,
> >>The package you've just sent to me contains the same rcmet.py as the
> >>package 2.1.2 and has on line 194 :
> >> params = db.getParams()
> >>
> >>Is it the right one? Because I'm still having the same error :
> >>
> >>Running using config file: ../rcmes/resources/cordexAF.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >>AttributeError: 'module' object has no attribute 'getParams'
> >>
> >>I've attached one of the files that I'm trying to use.
> >>
> >>Thanks again
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
> <ma...@atmos.ucla.e>
> >>du<ma...@atmos.ucla.edu>>><mailto:
> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>>:
> >>Here comes the attachment.
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed
> <ma...@atmos.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.edu<http://os.ucla.edu>>
> >><ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>>;
> >> 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com><mai
> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
> to%3Azaaboul@gmail.com<ma...@gmail.com>>>>]
> >>
> >>Sent: Wednesday, May 28, 2014 10:27 PM
> >>To: Joyce, Michael J (398J)
> >>Cc: Kim, Jinwon; rcmes-dev
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Michael,
> >>
> >>With the new Jinwon's RCMET version 2.1.3 I got this error :
> >>
> >>Running using config file: ../rcmes/resources/cordexAF.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >>AttributeError: 'module' object has no attribute 'getParams'
> >>
> >>My
> >>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
> >>m
> >>es
> >>
> >>I'm using files for precipitation exactly as I download them from ESGF
> >>portal for CORDEX MENA domain. The files I'm using are :
> >>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
> >>-
> >>198012.nc<http://198012.nc><http://198012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
> >>-
> >>199012.nc<http://199012.nc><http://199012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
> >>-
> >>200012.nc<http://200012.nc><http://200012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
> >>-
> >>200512.nc<http://200512.nc><http://200512.nc>
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
> >>2
> >>.nc
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
> >>1
> >>98012.nc<http://98012.nc><http://98012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
> >>1
> >>99012.nc<http://99012.nc><http://99012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
> >>2
> >>00012.nc<http://00012.nc><http://00012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
> >>2
> >>00512.nc<http://00512.nc><http://00512.nc>
> >>
> >>
> >>Do I have to pre-process this data first before I can use it with RCMET ?
> >>
> >>I've attached my config file to check if I'm missing something.
> >>
> >>Thanks for your help
> >>
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto
> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailto
> >>:M<mailto:M<mailto:M>>
> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Mi
> <mailto:Mi>
> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>:
> >>Hi Rashyd,
> >>
> >>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
> >>released a newer version that may resolve some of your problems. You can
> >>find and download it at [1]. I^1m sure Jinwon will be able to help you
> get
> >>this resolved. Thank you for sending the
> >> document you used. I^1ll be sure to get it and the website updated with
> >>the correct information.
> >>
> >>[1]
> >>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
> >><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
> >>
> >>Thanks much!
> >>
> >>--
> >>Michael J. Joyce
> >>Engineering Applications Software Engineer
> >>Instrument Software and Science Data Systems
> >>NASA Jet Propulsion Laboratory
> >>California Institute of Technology
> >>4800 Oak Grove Drive
> >>Pasadena, California 91109
> >>Mail Stop: 158-242
> >>Tel: (818) 354-7550
> >>Fax: (818) 393-1370
> >>
> >>
> >>
> >>From: Rashyd ZAABOUL
> >><za...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com><mai
> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
> to%3Azaaboul@gmail.com<ma...@gmail.com>>>><mailto:
> zaaboul@gmai<ma...@gmai>
> >>l.com<http://l.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
> >><ma...@gmail.com><mailto:zaaboul@g
> <ma...@g>
> >>mail.com<http://mail.com>>><
> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
> zaaboul@gmail.com<ma...@gmail.com>><mailto:zaaboul@gmail.c
> <ma...@gmail.c>
> >>om<ma...@gmail.com>>>>>>
> >>Date: Wednesday, May 28, 2014 at 5:09 AM
> >>
> >>To: "Kim, Jinwon (329M-Affiliate)"
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
> <ma...@atmos.ucla.e>
> >>du<ma...@atmos.ucla.edu>>><mailto:
> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@at<mailto:
> jkim@at>
> >>mos.ucla.edu<http://mos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu>><ma...@atmo><mailto:jkim@atm
> <ma...@atm>
> >>o>
> >>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.edu<http://os.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.edu
> >>>>>>
> >>Cc: rcmes-dev
> >><rc...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@j
> <ma...@j>
> >>pl.nasa.gov<http://pl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-dev@jpl.nasa.gov>>><ma...@jp><mailto:
> rc<mailto:rc>
> >>mes-dev@jp>
> >>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-
> <mailto:rcmes->
> >>dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.na<ma...@jpl.na>
> >>sa.gov<http://sa.gov>><m
> >>ailto:rcmes-dev@jpl.nasa.gov<mailto:ailto%3Arcmes-dev@jpl.nasa.gov
> ><mailto:ailto%3Arcmes-dev@jpl.nasa.gov<mailto:
> ailto%253Arcmes-dev@jpl.nasa.gov>>><mail
> >>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-d
> <mailto:rcmes-d><m
> >>ailto:rcmes-d>
> >>ev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:ev@jpl.nasa.gov<mailto:
> ev@jpl.nasa.gov>>>>>>,
> >> JPL
> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto
> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailto
> >>:M<mailto:M<mailto:M>>
> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Mi
> <mailto:Mi>
> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Jim and Michael,
> >>
> >>I've modified the script
> >>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
> >>json.loads function by simplejson.loads one to get more details on the
> >>error and this is what I got :
> >>
> >>Running using config file: ../rcmes/resources/mena.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
> >>line 27, in getParams
> >> paramDict = simplejson.loads(httpRequest.text)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> >> return _default_decoder.decode(s)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> >> obj, end = self.raw_decode(s)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> >> return self.scan_once(s, idx=_w(s, idx).end())
> >>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
> >>(char 0)
> >>
> >>What does this error mean ? I'm afraid the database RCMED is down while
> >>I'm trying to get data out of it !
> >>
> >>Best regards
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.e
> <ma...@atmos.ucla.e>
> >>du<ma...@atmos.ucla.edu>>><mailto:
> jkim@atmos.ucla.ed<ma...@atmos.ucla.ed><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@at<mailto:
> jkim@at>
> >>mos.ucla.edu<http://mos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu>><ma...@atmo><mailto:jkim@atm
> <ma...@atm>
> >>o>
> >>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.edu<http://os.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.edu
> >>>>>>:
> >>Thanks for your interests.
> >>
> >>For organizing your data:
> >>
> >>You can put your model data in your own directory. Then specify the link
> >>to the data (or data files) in the configure file, [MODEL] block. The
> >>code currently takes netcdf format files for input.
> >>
> >>If you use the observed data in the RCMES database, just specify the
> >>parameter numbers in the [RCMED] block, also in the configure file. If
> >>you use your own observation data, you can specify it in the same block
> >>(it also takes netcdf-format files).
> >>
> >>Hope this helps.
> >>
> >>
> >>With best regards,
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed
> <ma...@atmos.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.edu<http://os.ucla.edu>>
> >><ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>>><mailto:jkim@atm<mailto:
> jkim@atm>
> >>os.ucla.edu<http://os.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu>><ma...@atmos><mailto:jkim@atm
> <ma...@atm>
> >>os>
> >>.ucla.edu<http://ucla.edu><http://ucla.edu>><mailto:jkim@atmos.ucla.edu
> <ma...@atmos>.
> >>ucla.edu<http://ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.ucla.edu
> >>>>>;
> >> 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com><mai
> >>lto:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
> zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <ma...@gmail.com>
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com><mailto:
> to%3Azaaboul@gmail.com<ma...@gmail.com>>>><mailto:
> zaaboul@gmai<ma...@gmai>
> >>l.com<http://l.com><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
> >><ma...@gmail.com><mailto:zaaboul@g
> <ma...@g>
> >>mail.com<http://mail.com>>><
> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
> zaaboul@gmail.com<ma...@gmail.com>><mailto:zaaboul@gmail.c
> <ma...@gmail.c>
> >>om<ma...@gmail.com>>>>>]
> >>Sent: Tuesday, May 27, 2014 7:59 AM
> >>
> >>To:
> >>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jp
> <ma...@jp>
> >>l.nasa.gov<http://l.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-dev@jpl.nasa.gov>>><mailto:rcmes-dev@jpl<mailto:rcmes-dev@jpl
> ><mailto:rc<mailto:rc>
> >>mes-dev@jpl>
> >>.nasa.gov<http://nasa.gov><http://nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev
> <mailto:rcmes-dev>
> >>@jpl.nasa.gov<http://jpl.nasa.gov>>>><mailto:rcmes-dev@jpl.nasa.gov
> <ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa<mailto:
> rcmes-dev@jpl.nasa>.
> >>gov><ma
> >>ilto:rcmes-dev@jpl.nasa.gov<mailto:ilto%3Arcmes-dev@jpl.nasa.gov
> ><mailto:ilto%3Arcmes-dev@jpl.nasa.gov<mailto:
> ilto%253Arcmes-dev@jpl.nasa.gov>>><mailto
> >>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-de
> <mailto:rcmes-de><ma
> >>ilto:rcmes-de>
> >>v@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:v@jpl.nasa.gov<mailto:
> v@jpl.nasa.gov>>>>>
> >>Subject: failed to run rcmes following the step-by-step document
> >>
> >>Hi
> >>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
> >>TRMM ... I followed the step-by-step document but it seems that something
> >>is missing there. For example it doesn't tell how to organize my data?
> >>where to put the observations ...
> >>
> >>Could you please provide me with any useful documentation that can help
> >>me setup RCMES to evaluate those models?
> >>
> >>Thanks
> >>Rashyd
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaa<mailto:r.zaa><m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios
> <ma...@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
> ><mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
> ><ma...@biosaline.org>
> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >>><ma...@bios><mailto:r.za<mailto:r.za>
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
> >>o:r.zaaboul@biosaline.org.ae<mailto:o%3Ar.zaaboul@biosaline.org.ae
> >>>>><ma...@biosali><mailto:r.zaabou
> <mailto:r.zaabou>
> >>l@biosali>
> >>ne.org.ae<http://ne.org.ae><http://ne.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaaboul@biosaline.or<ma...@biosaline.or><mailto:r.zaaboul@b
> <ma...@b>
> >>iosaline.or>
> >>g.ae<http://g.ae><http://g.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:
> r.zaaboul@biosaline.org.ae><ma...@bios>
> >>aline.org.ae<http://aline.org.ae>>>><mailto:r.zaaboul@biosaline.org.ae
> <ma...@biosaline.org.ae><mailto:r.zaaboul@biosal<mailto:
> r.zaaboul@biosal>
> >>ine.org.ae<http://ine.org.ae>>
> >><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> ><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >>><ma
> >>ilto:r.zaaboul@biosaline.org.ae<mailto:ilto%3Ar.zaaboul@biosaline.org.ae
> ><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >><mail
> >>to:r.zaaboul@biosaline.org.ae<mailto:to%3Ar.zaaboul@biosaline.org.ae
> ><mailto:to%3Ar.zaaboul@biosaline.org.ae<mailto:
> to%253Ar.zaaboul@biosaline.org.ae>>>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaa<mailto:r.zaa><m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios
> <ma...@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
> ><mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
> ><ma...@biosaline.org>
> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >>><ma...@bios><mailto:r.za<mailto:r.za>
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
> >>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaa<mailto:r.zaa><m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios
> <ma...@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <ma...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul
> ><mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae
> ><ma...@biosaline.org>
> >>.ae<mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >>><ma...@bios><mailto:r.za<mailto:r.za>
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailt
> >>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaa<mailto:r.zaa><m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios
> <ma...@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <ma...@biosaline.org.ae>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za
> <mailto:r.za>
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>
> >>Climate and Water Modeling Scientist
> >>
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
> >
> >Please consider the environment before printing this e-mail
>
>
>
>
> --
> Rashyd Zaaboul
> Climate and Water Modeling Scientist
> International Center for Biosaline Agriculture
> P.O. Box 14660 Dubai, UAE
> Mobile : +971 50 675 2007
> Office : +971 4 336 1100 x 259
> r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
> Please consider the environment before printing this e-mail
>
--
Rashyd Zaaboul
*Climate and Water Modeling Scientist*
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae
*Please consider the environment before printing this e-mail*
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
It's really nice to hear that it's useful for your research.
With best regards,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com]
Sent: Monday, June 02, 2014 10:08 PM
To: Mattmann, Chris A (3980)
Cc: Kim, Jinwon; sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Thank you Chris and many thanks to all your colleagues for their help. It's very useful tool and I keep sending requests to the mailing lists you mentioned.
Kim, I'll look at the code and try to use the function calc_pdf.
Thanks and best regards
Rashyd
2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <ch...@jpl.nasa.gov>>:
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to dev@climate.apache.org<ma...@climate.apache.org> and
including the mailing list as it really helps to show the activity
going on.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: <Kim>, Jinwon <jk...@atmos.ucla.edu>>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <za...@gmail.com>>
Cc: Chris Mattmann <Ch...@jpl.nasa.gov>>,
"sanjay@tropmet.res.in<ma...@tropmet.res.in>" <sa...@tropmet.res.in>>, "ramarao@tropmet.res.in<ma...@tropmet.res.in>"
<ra...@tropmet.res.in>>, "Joyce, Michael J (398J)"
<Mi...@jpl.nasa.gov>>, rcmes-dev <rc...@jpl.nasa.gov>>,
"Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>>,
"dev@climate.apache.org<ma...@climate.apache.org>" <de...@climate.apache.org>>, "Mcgibbney, Lewis J
(398J)" <Le...@jpl.nasa.gov>>
Subject: RE: failed to run rcmes following the step-by-step document
>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J (398J); rcmes-dev; Goodale,
>Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>________________________________________
>From: Mattmann, Chris A (3980)
>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL <za...@gmail.com>>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu>>>
>Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>>"
><sa...@tropmet.res.in>>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in>>"
><ra...@tropmet.res.in>>>, "Joyce, Michael J
>(398J)"
><Mi...@jpl.nasa.gov>>>,
>rcmes-dev
><rc...@jpl.nasa.gov>>>, "Goodale,
>Cameron E (398J)"
><ca...@jpl.nasa.gov>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu>>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in>>
>><ma...@tropmet.res.in>>>; Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>>
>><ma...@jpl.nasa>.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>
>>du<ma...@atmos.ucla.edu>>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>> params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.e>
>>du<ma...@atm>
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>
>>u<ma...@atm>
>>os.ucla.edu<http://os.ucla.edu>>
>><ma...@atmos.ucla.edu>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc><http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc><http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc><http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc><http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc><http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc><http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc><http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc><http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><Mi...@jpl.nasa.gov>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto
>>:M<mailto:M<mailto:M>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Mi<mailto:Mi>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>:
>>Hi Rashyd,
>>
>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I^1m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I^1ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550
>>Fax: (818) 393-1370
>>
>>
>>
>>From: Rashyd ZAABOUL
>><za...@gmail.com><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>
>>l.com<ht...@g>
>>mail.com<http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>
>>om<ma...@gmail.com>>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.e>
>>du<ma...@atm>
>>os.ucla.ed>
>>u<ma...@at>
>>mos.ucla.edu<ht...@atm>
>>o>
>>s.ucla.edu<ht...@atm>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>
>>Cc: rcmes-dev
>><rc...@j>
>>pl.nasa.gov<ht...@jp><mailto:rc<mailto:rc>
>>mes-dev@jp>
>>l.nasa.gov<ht...@jpl.nasa.gov><mailto:rcmes-<mailto:rcmes->
>>dev@jpl.nasa.gov<ma...@jpl.na>
>>sa.gov<http://sa.gov>><m
>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mail
>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-d<mailto:rcmes-d><m
>>ailto:rcmes-d>
>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>,
>> JPL
>><Mi...@jpl.nasa.gov>><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto
>>:M<mailto:M<mailto:M>>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:Mi<mailto:Mi>
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>> paramDict = simplejson.loads(httpRequest.text)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> return _default_decoder.decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> obj, end = self.raw_decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><jk...@atmos.ucla.e>
>>du<ma...@atm>
>>os.ucla.ed>
>>u<ma...@at>
>>mos.ucla.edu<ht...@atm>
>>o>
>>s.ucla.edu<ht...@atm>
>>os.ucla.edu<ht...@atmos.ucla.edu>>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.ed>
>>u<ma...@atm>
>>os.ucla.edu<http://os.ucla.edu>>
>><ma...@atm>
>>os.ucla.edu<ht...@atm>
>>os>
>>.ucla.edu<ht...@atmos>.
>>ucla.edu<ht...@atmos.ucla.edu>>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mai
>>lto:zaaboul@gmail.com<ma...@gmail.com>
>>><mail
>>to:zaaboul@gmail.com<ma...@gmai>
>>l.com<ht...@g>
>>mail.com<http://mail.com>>><
>>mailto:zaaboul@gmail.com<ma...@gmail.c>
>>om<ma...@gmail.com>>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>rcmes-dev@jpl.nasa.gov<ma...@jp>
>>l.nasa.gov<ht...@jpl><mailto:rc<mailto:rc>
>>mes-dev@jpl>
>>.nasa.gov<ht...@jpl.nasa.gov><mailto:rcmes-dev<mailto:rcmes-dev>
>>@jpl.nasa.gov<ht...@jpl.nasa>.
>>gov><ma
>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto
>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-de<mailto:rcmes-de><ma
>>ilto:rcmes-de>
>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>
>>aline.org.ae<ht...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>
>>.ae<ma...@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosali><mailto:r.zaabou<mailto:r.zaabou>
>>l@biosali>
>>ne.org.ae<ht...@biosaline.org.ae><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@b>
>>iosaline.or>
>>g.ae<ht...@bios>
>>aline.org.ae<ht...@biosal>
>>ine.org.ae<http://ine.org.ae>>
>><ma...@biosaline.org.ae>>><ma
>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mail
>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>
>>aline.org.ae<ht...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>
>>.ae<ma...@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>
>>aline.org.ae<ht...@biosaline.org.ae>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<ht...@biosaline.org>
>>.ae<ma...@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<ht...@biosaline.org.ae><mailt
>>o:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@bios>
>>aline.org.ae<ht...@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.za<mailto:r.za>
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
Please consider the environment before printing this e-mail
Re: failed to run rcmes following the step-by-step document
Posted by Rashyd ZAABOUL <za...@gmail.com>.
Thank you Chris and many thanks to all your colleagues for their help. It's
very useful tool and I keep sending requests to the mailing lists you
mentioned.
Kim, I'll look at the code and try to use the function calc_pdf.
Thanks and best regards
Rashyd
2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) <
chris.a.mattmann@jpl.nasa.gov>:
> Thanks Guys. Rashyd, I just wanted to let you know to feel free to
> keep sending any questions you have to dev@climate.apache.org and
> including the mailing list as it really helps to show the activity
> going on.
>
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Chris Mattmann, Ph.D.
> Chief Architect
> Instrument Software and Science Data Systems Section (398)
> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
> Office: 168-519, Mailstop: 168-5th floor
> Email: chris.a.mattmann@nasa.gov
> WWW: http://sunset.usc.edu/~mattmann/
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Adjunct Associate Professor, Computer Science Department
> University of Southern California, Los Angeles, CA 90089 USA
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
> -----Original Message-----
> From: <Kim>, Jinwon <jk...@atmos.ucla.edu>
> Date: Monday, June 2, 2014 7:56 AM
> To: Rashyd ZAABOUL <za...@gmail.com>
> Cc: Chris Mattmann <Ch...@jpl.nasa.gov>,
> "sanjay@tropmet.res.in" <sa...@tropmet.res.in>, "ramarao@tropmet.res.in"
> <ra...@tropmet.res.in>, "Joyce, Michael J (398J)"
> <Mi...@jpl.nasa.gov>, rcmes-dev <rc...@jpl.nasa.gov>,
> "Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>,
> "dev@climate.apache.org" <de...@climate.apache.org>, "Mcgibbney, Lewis J
> (398J)" <Le...@jpl.nasa.gov>
> Subject: RE: failed to run rcmes following the step-by-step document
>
> >Glad to hear it works.
> >
> >pdf calculation is not included in the metrics menu at this time, but a
> >routine to calculate 'pdf skill score', i.e., an area common to two pdfs
> >(e.g., model and observations) is available in the code. the routine is:
> >'calc_pdf' in the code
> >"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
> >
> >to access/modify,
> >(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
> >(2) edit the file 'metrics.py' using an editor, for example, "vi
> >metrics.py",
> >(3) look for 'def calc_pdf(dataset_1, dataset_2):'
> >
> >if you are familiar with python, you may be able to use that routine to
> >create an option to calculate pdf's (and cdf's). if you are not familiar
> >with python, we can add it to the next release, but will take a few weeks.
> >
> >
> >Hope this is helpful.
> >
> >
> >Best,
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >jkim@atmos.ucla.edu; 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL [zaaboul@gmail.com]
> >Sent: Monday, June 02, 2014 3:50 AM
> >To: Kim, Jinwon
> >Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in;
> >ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale,
> >Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi all,
> >It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
> >... Now I've two questions :
> >- Is it possible to compute PDFs and CDFs and other metrics?
> >- Is it possible to compute these metrics on other parameters such as 2m
> >temperature, 500mb height, wind at different levels to compare with
> >reanalysis for example?
> >
> >Best regards
> >Rashyd
> >
> >
> >2014-06-01 12:50 GMT-04:00 Kim, Jinwon
> ><jk...@atmos.ucla.edu>>:
> >The problem was the correct rcmet.py was not copied to
> >"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
> >"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
> >will resolve this problem. I've always run rcmet from
> >"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
> >
> >Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
> >the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
> >________________________________________
> >From: Mattmann, Chris A (3980)
> >[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>]
> >Sent: Sunday, June 01, 2014 9:43 AM
> >To: Rashyd ZAABOUL; Kim, Jinwon
> >Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>;
> >ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
> >(398J); rcmes-dev; Goodale, Cameron E (398J);
> >dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J
> >(398J)
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi Rashyd,
> >
> >I'm CC'ing the Apache list for the Open Climate Workbench project where
> >we have a lot of eyes on the list. Maybe someone on the Apache list can
> >help as well.
> >
> >Also we are happy to have a Skype/telecon with you this week to get
> >your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
> >work with Rashyd to get his problem fixed.
> >
> >Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
> >Paul help out on this - they'll take it from here.
> >
> >Cheers,
> >Chris
> >
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >Chris Mattmann, Ph.D.
> >Chief Architect
> >Instrument Software and Science Data Systems Section (398)
> >NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
> >Office: 168-519, Mailstop: 168-5th floor
> >Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
> >WWW: http://sunset.usc.edu/~mattmann/
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >Adjunct Associate Professor, Computer Science Department
> >University of Southern California, Los Angeles, CA 90089 USA
> >++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >
> >
> >
> >
> >
> >
> >-----Original Message-----
> >From: Rashyd ZAABOUL <za...@gmail.com>>
> >Date: Sunday, June 1, 2014 2:31 AM
> >To: "Kim, Jinwon (329M-Affiliate)"
> ><jk...@atmos.ucla.edu>>
> >Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>"
> ><sa...@tropmet.res.in>>,
> >"ramarao@tropmet.res.in<ma...@tropmet.res.in>"
> ><ra...@tropmet.res.in>>, "Joyce, Michael
> J
> >(398J)"
> ><Mi...@jpl.nasa.gov>>,
> >rcmes-dev
> ><rc...@jpl.nasa.gov>>, "Goodale,
> >Cameron E (398J)"
> ><ca...@jpl.nasa.gov>>
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
> >>contains params = db.getParams() on line 194 !!!
> >>
> >>
> >>I've tried this tar file which is equal to the previous one (I've
> >>modified the line 194 in rcmet.py) and I've got the same error:
> >>
> >>
> >>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
> >>
> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
> >>L
> >>atName,obsTimeName,obsTimestep,gridBox,models)
> >>ValueError: too many values to unpack
> >>
> >>
> >>
> >>
> >>Regards
> >>Rashyd
> >>
> >>
> >>
> >>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu>>:
> >>
> >>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
> >>tar file again. Please check this one out. Please clean up previous
> >>versions and try the attached one with the included config file
> >>(cordexMENA.cfg). This is the code/config file I used
> >> to create the figures I sent in the earlier e-mail.
> >>
> >>For your error messages:
> >>
> >>(1) The parameter "obsSource" directs the code where to find observation
> >>data for evaluation. "obsSource=1" is reserved for the case users provide
> >>their own observation data. If you set obsSource=1 and do not provide
> >>data, it will result in error exit as the
> >> code cannot find the observation data file(s) specified by the user.
> >>Thus, unless you provide your own observation data, obsSource=1 must not
> >>be used.
> >>
> >>(2) The exit message "No input observation data file. EXIT" occurs when
> >>there is no observation data file id's are assigned when obsSource=0 is
> >>set. This can happen if "obsParamId" in the config file is not properly
> >>set. We don't expect any problems if obsParamId
> >> is correctly set because the data specified by obsParamId are included
> >>in the database (this requires active internet connection). Will you send
> >>me your configure file so that I can look at it?
> >>
> >>
> >>
> >>
> >>Thanks for your patience.
> >>
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
> >>
> >>Sent: Saturday, May 31, 2014 11:58 PM
> >>To: Kim, Jinwon
> >>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>;
> >>ramarao@tropmet.res.in<ma...@tropmet.res.in>
> >><ma...@tropmet.res.in>>; Joyce,
> >>Michael J
> >>(398J); rcmes-dev;
> >>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>
> >><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa
> .
> >>gov>>
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>
> >>Hi Kim,
> >>
> >>Thank you for your help. I'm sorry but I'm getting confused with all
> >>these different packages I received from you and your colleagues!. The
> >>last one you just sent to me still contains params = db.getParams() in
> >>rcmet.py at line 194. I've replaced this file
> >> with the one sent by Cameron before and it seems to be ok. But when I've
> >>tried to reproduce the result you sent to me (with obsSource=1) I got
> >>this error :
> >>
> >>...
> >>data_prep is completed: both obs and mdl data are re-gridded to a common
> >>analysis grid
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 237, in runUsingConfig
> >>
> >>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
> >>L
> >>atName,obsTimeName,obsTimestep,gridBox,models)
> >>ValueError: too many values to unpack
> >>
> >>Do you know how can I fix this please?
> >>
> >>NOTE: with obsSource=0 I got :
> >>No input observation data file. EXIT
> >>
> >>Thanks and regards
> >>Rashyd
> >>
> >>
> >>
> >>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.e
> >>du<ma...@atmos.ucla.edu>>>:
> >>To all,
> >>
> >>*** Please update your RCMET with the attached version 2.1.3. ***
> >>
> >>I found that some files included in the earlier tar file for the release
> >>version 2.1.3 have some critical issues. Now I've applied all fixes and
> >>successfully ran a test case with a MENA domain dataset; the version
> >>works properly now. I apologize for inconvenience.
> >>
> >>Rashyd:
> >>Please see the two attached figures for the MENA domain (model bias, GPCP
> >>climatology for 1991-2000 over the MENA domain) for your reference. The
> >>configure file for this processing is:
> >>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
> >>domain has been adjusted to fit the MENA domain.
> >>
> >>
> >>Aanjay and Rama:
> >>The code also works fine with the India domain. The two attached figures
> >>for the India domain shows the TRMM climatology for 98-2000 and the bias
> >>of model ensemble against TRMM for the same period. The sample configure
> >>file is: cordexIndia.cfg under resources/
> >> (the same location as the MENA config file).
> >>
> >>Please contact me/mike/rcmes-dev if you have any questions.
> >>
> >>
> >>With best regards,
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >>u<ma...@atmos.ucla.edu>>; 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <mai
> >>lto:zaaboul@gmail.com>>]
> >>
> >>Sent: Thursday, May 29, 2014 12:07 AM
> >>To: Kim, Jinwon
> >>Cc: Joyce, Michael J (398J); rcmes-dev
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Michael,
> >>The package you've just sent to me contains the same rcmet.py as the
> >>package 2.1.2 and has on line 194 :
> >> params = db.getParams()
> >>
> >>Is it the right one? Because I'm still having the same error :
> >>
> >>Running using config file: ../rcmes/resources/cordexAF.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >>AttributeError: 'module' object has no attribute 'getParams'
> >>
> >>I've attached one of the files that I'm trying to use.
> >>
> >>Thanks again
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.e
> >>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:
> jkim@atm
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>>>:
> >>Here comes the attachment.
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atm
> >>os.ucla.edu>
> >><ma...@atmos.ucla.edu>>>;
> >> 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <mai
> >>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com>>>]
> >>
> >>Sent: Wednesday, May 28, 2014 10:27 PM
> >>To: Joyce, Michael J (398J)
> >>Cc: Kim, Jinwon; rcmes-dev
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Michael,
> >>
> >>With the new Jinwon's RCMET version 2.1.3 I got this error :
> >>
> >>Running using config file: ../rcmes/resources/cordexAF.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >>AttributeError: 'module' object has no attribute 'getParams'
> >>
> >>My
> >>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
> >>m
> >>es
> >>
> >>I'm using files for precipitation exactly as I download them from ESGF
> >>portal for CORDEX MENA domain. The files I'm using are :
> >>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
> >>-
> >>198012.nc<http://198012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
> >>-
> >>199012.nc<http://199012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
> >>-
> >>200012.nc<http://200012.nc>
> >>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
> >>-
> >>200512.nc<http://200512.nc>
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
> >>2
> >>.nc
> >>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
> >>2
> >>.nc
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
> >>1
> >>98012.nc<http://98012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
> >>1
> >>99012.nc<http://99012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
> >>2
> >>00012.nc<http://00012.nc>
> >>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
> >>2
> >>00512.nc<http://00512.nc>
> >>
> >>
> >>Do I have to pre-process this data first before I can use it with RCMET ?
> >>
> >>I've attached my config file to check if I'm missing something.
> >>
> >>Thanks for your help
> >>
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto
> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto
> >>:M<mailto:M>
> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> Mi
> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>:
> >>Hi Rashyd,
> >>
> >>It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
> >>released a newer version that may resolve some of your problems. You can
> >>find and download it at [1]. I¹m sure Jinwon will be able to help you get
> >>this resolved. Thank you for sending the
> >> document you used. I¹ll be sure to get it and the website updated with
> >>the correct information.
> >>
> >>[1]
> >>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
> >><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
> >>
> >>Thanks much!
> >>
> >>--
> >>Michael J. Joyce
> >>Engineering Applications Software Engineer
> >>Instrument Software and Science Data Systems
> >>NASA Jet Propulsion Laboratory
> >>California Institute of Technology
> >>4800 Oak Grove Drive
> >>Pasadena, California 91109
> >>Mail Stop: 158-242
> >>Tel: (818) 354-7550
> >>Fax: (818) 393-1370
> >>
> >>
> >>
> >>From: Rashyd ZAABOUL
> >><za...@gmail.com><mailto:zaaboul@gmail.com
> <mai
> >>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
> zaaboul@gmai
> >>l.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:
> zaaboul@g
> >>mail.com>><
> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
> zaaboul@gmail.c
> >>om<ma...@gmail.com>>>>>
> >>Date: Wednesday, May 28, 2014 at 5:09 AM
> >>
> >>To: "Kim, Jinwon (329M-Affiliate)"
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.e
> >>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:
> jkim@atm
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>><mailto:
> jkim@at
> >>mos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmo<mailto:
> jkim@atm
> >>o>
> >>s.ucla.edu<http://s.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atm
> >>os.ucla.edu><ma...@atmos.ucla.edu>>>>>
> >>Cc: rcmes-dev
> >><rc...@jpl.nasa.gov><mailto:
> rcmes-dev@j
> >>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jp<mailto:
> rc
> >>mes-dev@jp>
> >>l.nasa.gov<http://l.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-
> >>dev@jpl.nasa.gov>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-dev@jpl.na
> >>sa.gov><m
> >>ailto:rcmes-dev@jpl.nasa.gov<mailto:ailto%3Arcmes-dev@jpl.nasa.gov
> >><mail
> >>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-d
> <m
> >>ailto:rcmes-d>
> >>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>,
> >> JPL
> >><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto
> >>:Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >>><mailt
> >>o:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >>Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto
> >>:M<mailto:M>
> >>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> Mi
> >>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>
> >>Subject: Re: failed to run rcmes following the step-by-step document
> >>
> >>Hi Jim and Michael,
> >>
> >>I've modified the script
> >>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
> >>json.loads function by simplejson.loads one to get more details on the
> >>error and this is what I got :
> >>
> >>Running using config file: ../rcmes/resources/mena.cfg
> >>Traceback (most recent call last):
> >> File "rcmet.py", line 299, in <module>
> >> runUsingConfig(args.CONFIG)
> >> File "rcmet.py", line 194, in runUsingConfig
> >> params = db.getParams()
> >> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
> >>line 27, in getParams
> >> paramDict = simplejson.loads(httpRequest.text)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> >> return _default_decoder.decode(s)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> >> obj, end = self.raw_decode(s)
> >> File
> >>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
> >>l
> >>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> >> return self.scan_once(s, idx=_w(s, idx).end())
> >>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
> >>(char 0)
> >>
> >>What does this error mean ? I'm afraid the database RCMED is down while
> >>I'm trying to get data out of it !
> >>
> >>Best regards
> >>Rashyd
> >>
> >>
> >>
> >>
> >>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
> >><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.e
> >>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:
> jkim@atm
> >>os.ucla.ed>
> >>u<ma...@atmos.ucla.edu>>><mailto:
> jkim@at
> >>mos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmo<mailto:
> jkim@atm
> >>o>
> >>s.ucla.edu<http://s.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atm
> >>os.ucla.edu><ma...@atmos.ucla.edu>>>>>:
> >>Thanks for your interests.
> >>
> >>For organizing your data:
> >>
> >>You can put your model data in your own directory. Then specify the link
> >>to the data (or data files) in the configure file, [MODEL] block. The
> >>code currently takes netcdf format files for input.
> >>
> >>If you use the observed data in the RCMES database, just specify the
> >>parameter numbers in the [RCMED] block, also in the configure file. If
> >>you use your own observation data, you can specify it in the same block
> >>(it also takes netcdf-format files).
> >>
> >>Hope this helps.
> >>
> >>
> >>With best regards,
> >>
> >>-----------------------------------------------------------------
> >>Jinwon Kim
> >>Joint Institute for Regional Earth System Science and Engineering and
> >>Dept. Atmospheric and Oceanic Sciences
> >>University of California, Los Angeles
> >>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >>90095-7228, USA
> >>
> >>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atm
> >>os.ucla.edu>
> >><ma...@atmos.ucla.edu>>><mailto:
> jkim@atm
> >>os.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos<mailto:
> jkim@atm
> >>os>
> >>.ucla.edu<http://ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos
> .
> >>ucla.edu><ma...@atmos.ucla.edu>>>>;
> >> 310-206-2828
> >>________________________________________
> >>From: Rashyd ZAABOUL
> >>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <mai
> >>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:
> zaaboul@gmail.com
> >>><mail
> >>to:zaaboul@gmail.com<ma...@gmail.com>>><mailto:
> zaaboul@gmai
> >>l.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:
> zaaboul@g
> >>mail.com>><
> >>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:
> zaaboul@gmail.c
> >>om<ma...@gmail.com>>>>]
> >>Sent: Tuesday, May 27, 2014 7:59 AM
> >>
> >>To:
> >>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jp
> >>l.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl<mailto:
> rc
> >>mes-dev@jpl>
> >>.nasa.gov<http://nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-dev
> >>@jpl.nasa.gov>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev@jpl.nasa
> .
> >>gov><ma
> >>ilto:rcmes-dev@jpl.nasa.gov<mailto:ilto%3Arcmes-dev@jpl.nasa.gov
> >><mailto
> >>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-de
> <ma
> >>ilto:rcmes-de>
> >>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
> >>Subject: failed to run rcmes following the step-by-step document
> >>
> >>Hi
> >>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
> >>TRMM ... I followed the step-by-step document but it seems that something
> >>is missing there. For example it doesn't tell how to organize my data?
> >>where to put the observations ...
> >>
> >>Could you please provide me with any useful documentation that can help
> >>me setup RCMES to evaluate those models?
> >>
> >>Thanks
> >>Rashyd
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.za
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
> <m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul
> <mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org
> >>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:
> r.za
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <mailt
> >>o:r.zaaboul@biosaline.org.ae>>>><mailto:r.zaaboul@biosali<mailto:
> r.zaabou
> >>l@biosali>
> >>ne.org.ae<http://ne.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:
> r.za
> >>aboul@biosaline.org.ae>><mailto:r.zaaboul@biosaline.or<mailto:
> r.zaaboul@b
> >>iosaline.or>
> >>g.ae<http://g.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:
> r.zaaboul@bios
> >>aline.org.ae>>><mailto:r.zaaboul@biosaline.org.ae<mailto:
> r.zaaboul@biosal
> >>ine.org.ae>
> >><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosaline.org.ae
> >><ma
> >>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
> >>to:r.zaaboul@biosaline.org.ae<mailto:to%3Ar.zaaboul@biosaline.org.ae
> >>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.za
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
> <m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul
> <mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org
> >>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:
> r.za
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <mailt
> >>o:r.zaaboul@biosaline.org.ae>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.za
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
> <m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul
> <mailto
> >>:r.zaaboul>
> >>@biosaline.org.ae<http://biosaline.org.ae><mailto:
> r.zaaboul@biosaline.org
> >>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:
> r.za
> >>aboul@bios>
> >>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <mailt
> >>o:r.zaaboul@biosaline.org.ae>>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.za
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa
> <m
> >>ailto:r.zaa>
> >>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >>aline.org.ae<ma...@biosaline.org.ae>>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>Climate and Water Modeling Scientist
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.za
> >>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>--
> >>Rashyd Zaaboul
> >>
> >>Climate and Water Modeling Scientist
> >>
> >>International Center for Biosaline Agriculture
> >>P.O. Box 14660 Dubai, UAE
> >>Mobile : +971 50 675 2007
> >>Office : +971 4 336 1100 x 259
> >>
> >>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
> >>
> >>Please consider the environment before printing this e-mail
> >>
> >>
> >
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
> >
> >Please consider the environment before printing this e-mail
>
>
--
Rashyd Zaaboul
*Climate and Water Modeling Scientist*
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae
*Please consider the environment before printing this e-mail*
Re: failed to run rcmes following the step-by-step document
Posted by "Mattmann, Chris A (3980)" <ch...@jpl.nasa.gov>.
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to dev@climate.apache.org and
including the mailing list as it really helps to show the activity
going on.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: <Kim>, Jinwon <jk...@atmos.ucla.edu>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <za...@gmail.com>
Cc: Chris Mattmann <Ch...@jpl.nasa.gov>,
"sanjay@tropmet.res.in" <sa...@tropmet.res.in>, "ramarao@tropmet.res.in"
<ra...@tropmet.res.in>, "Joyce, Michael J (398J)"
<Mi...@jpl.nasa.gov>, rcmes-dev <rc...@jpl.nasa.gov>,
"Goodale, Cameron E (398J)" <ca...@jpl.nasa.gov>,
"dev@climate.apache.org" <de...@climate.apache.org>, "Mcgibbney, Lewis J
(398J)" <Le...@jpl.nasa.gov>
Subject: RE: failed to run rcmes following the step-by-step document
>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in;
>ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale,
>Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>________________________________________
>From: Mattmann, Chris A (3980)
>[chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
>WWW: http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL <za...@gmail.com>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu>>
>Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>"
><sa...@tropmet.res.in>>,
>"ramarao@tropmet.res.in<ma...@tropmet.res.in>"
><ra...@tropmet.res.in>>, "Joyce, Michael J
>(398J)"
><Mi...@jpl.nasa.gov>>,
>rcmes-dev
><rc...@jpl.nasa.gov>>, "Goodale,
>Cameron E (398J)"
><ca...@jpl.nasa.gov>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>>ramarao@tropmet.res.in<ma...@tropmet.res.in>
>><ma...@tropmet.res.in>>; Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov>
>><mailto:cameron.e.goodale@jpl.nasa.gov<mailto:cameron.e.goodale@jpl.nasa.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>> params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:jkim@atm
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu>
>><ma...@atmos.ucla.edu>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><Mi...@jpl.nasa.gov><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto
>>:M<mailto:M>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mi
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>:
>>Hi Rashyd,
>>
>>It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I¹m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I¹ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550
>>Fax: (818) 393-1370
>>
>>
>>
>>From: Rashyd ZAABOUL
>><za...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>><mailto:zaaboul@gmai
>>l.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>mail.com>><
>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.c
>>om<ma...@gmail.com>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:jkim@atm
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>><mailto:jkim@at
>>mos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmo<mailto:jkim@atm
>>o>
>>s.ucla.edu<http://s.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu><ma...@atmos.ucla.edu>>>>>
>>Cc: rcmes-dev
>><rc...@jpl.nasa.gov><mailto:rcmes-dev@j
>>pl.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jp<mailto:rc
>>mes-dev@jp>
>>l.nasa.gov<http://l.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-
>>dev@jpl.nasa.gov>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev@jpl.na
>>sa.gov><m
>>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mail
>>to:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-d<m
>>ailto:rcmes-d>
>>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>,
>> JPL
>><Mi...@jpl.nasa.gov><mailto
>>:Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailt
>>o:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
>>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto
>>:M<mailto:M>
>>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:Mi
>>chael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>> File "rcmet.py", line 299, in <module>
>> runUsingConfig(args.CONFIG)
>> File "rcmet.py", line 194, in runUsingConfig
>> params = db.getParams()
>> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>> paramDict = simplejson.loads(httpRequest.text)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>> return _default_decoder.decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>> obj, end = self.raw_decode(s)
>> File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>> return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.e
>>du<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.ed<mailto:jkim@atm
>>os.ucla.ed>
>>u<ma...@atmos.ucla.edu>>><mailto:jkim@at
>>mos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmo<mailto:jkim@atm
>>o>
>>s.ucla.edu<http://s.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu><ma...@atmos.ucla.edu>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atm
>>os.ucla.edu>
>><ma...@atmos.ucla.edu>>><mailto:jkim@atm
>>os.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos<mailto:jkim@atm
>>os>
>>.ucla.edu<http://ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos.
>>ucla.edu><ma...@atmos.ucla.edu>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mai
>>lto:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
>>><mail
>>to:zaaboul@gmail.com<ma...@gmail.com>>><mailto:zaaboul@gmai
>>l.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mailto:zaaboul@g
>>mail.com>><
>>mailto:zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.c
>>om<ma...@gmail.com>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jp
>>l.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl<mailto:rc
>>mes-dev@jpl>
>>.nasa.gov<http://nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev
>>@jpl.nasa.gov>>><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-dev@jpl.nasa.
>>gov><ma
>>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto
>>:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-de<ma
>>ilto:rcmes-de>
>>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><mailto:r.zaaboul@biosaline.org
>>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:r.za
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailt
>>o:r.zaaboul@biosaline.org.ae>>>><mailto:r.zaaboul@biosali<mailto:r.zaabou
>>l@biosali>
>>ne.org.ae<http://ne.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:r.za
>>aboul@biosaline.org.ae>><mailto:r.zaaboul@biosaline.or<mailto:r.zaaboul@b
>>iosaline.or>
>>g.ae<http://g.ae><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@bios
>>aline.org.ae>>><mailto:r.zaaboul@biosaline.org.ae<mailto:r.zaaboul@biosal
>>ine.org.ae>
>><ma...@biosaline.org.ae>><ma
>>ilto:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mail
>>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><mailto:r.zaaboul@biosaline.org
>>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:r.za
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailt
>>o:r.zaaboul@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><mailto:r.zaaboul@biosaline.org
>>.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@bios<mailto:r.za
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mailt
>>o:r.zaaboul@biosaline.org.ae>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<m
>>ailto:r.zaa>
>>boul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>>aline.org.ae<ma...@biosaline.org.ae>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.za
>>aboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
Glad to hear it works.
pdf calculation is not included in the metrics menu at this time, but a routine to calculate 'pdf skill score', i.e., an area common to two pdfs (e.g., model and observations) is available in the code. the routine is:
'calc_pdf' in the code "rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
to access/modify,
(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
(2) edit the file 'metrics.py' using an editor, for example, "vi metrics.py",
(3) look for 'def calc_pdf(dataset_1, dataset_2):'
if you are familiar with python, you may be able to use that routine to create an option to calculate pdf's (and cdf's). if you are not familiar with python, we can add it to the next release, but will take a few weeks.
Hope this is helpful.
Best,
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: Rashyd ZAABOUL [zaaboul@gmail.com]
Sent: Monday, June 02, 2014 3:50 AM
To: Kim, Jinwon
Cc: Mattmann, Chris A (3980); sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Hi all,
It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU ... Now I've two questions :
- Is it possible to compute PDFs and CDFs and other metrics?
- Is it possible to compute these metrics on other parameters such as 2m temperature, 500mb height, wind at different levels to compare with reanalysis for example?
Best regards
Rashyd
2014-06-01 12:50 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>>:
The problem was the correct rcmet.py was not copied to "rcmet2.1.3/src/main/python/bin". Copying rcmet.py in "rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin" will resolve this problem. I've always run rcmet from "rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
________________________________________
From: Mattmann, Chris A (3980) [chris.a.mattmann@jpl.nasa.gov<ma...@jpl.nasa.gov>]
Sent: Sunday, June 01, 2014 9:43 AM
To: Rashyd ZAABOUL; Kim, Jinwon
Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>; ramarao@tropmet.res.in<ma...@tropmet.res.in>; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org<ma...@climate.apache.org>; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Hi Rashyd,
I'm CC'ing the Apache list for the Open Climate Workbench project where
we have a lot of eyes on the list. Maybe someone on the Apache list can
help as well.
Also we are happy to have a Skype/telecon with you this week to get
your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
work with Rashyd to get his problem fixed.
Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
Paul help out on this - they'll take it from here.
Cheers,
Chris
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov<ma...@nasa.gov>
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: Rashyd ZAABOUL <za...@gmail.com>>
Date: Sunday, June 1, 2014 2:31 AM
To: "Kim, Jinwon (329M-Affiliate)" <jk...@atmos.ucla.edu>>
Cc: "sanjay@tropmet.res.in<ma...@tropmet.res.in>" <sa...@tropmet.res.in>>,
"ramarao@tropmet.res.in<ma...@tropmet.res.in>" <ra...@tropmet.res.in>>, "Joyce, Michael J
(398J)" <Mi...@jpl.nasa.gov>>, rcmes-dev
<rc...@jpl.nasa.gov>>, "Goodale, Cameron E (398J)"
<ca...@jpl.nasa.gov>>
Subject: Re: failed to run rcmes following the step-by-step document
>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>contains params = db.getParams() on line 194 !!!
>
>
>I've tried this tar file which is equal to the previous one (I've
>modified the line 194 in rcmet.py) and I've got the same error:
>
>
>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>
>
>
>Regards
>Rashyd
>
>
>
>2014-06-01 11:26 GMT+04:00 Kim, Jinwon <jk...@atmos.ucla.edu>>:
>
>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>tar file again. Please check this one out. Please clean up previous
>versions and try the attached one with the included config file
>(cordexMENA.cfg). This is the code/config file I used
> to create the figures I sent in the earlier e-mail.
>
>For your error messages:
>
>(1) The parameter "obsSource" directs the code where to find observation
>data for evaluation. "obsSource=1" is reserved for the case users provide
>their own observation data. If you set obsSource=1 and do not provide
>data, it will result in error exit as the
> code cannot find the observation data file(s) specified by the user.
>Thus, unless you provide your own observation data, obsSource=1 must not
>be used.
>
>(2) The exit message "No input observation data file. EXIT" occurs when
>there is no observation data file id's are assigned when obsSource=0 is
>set. This can happen if "obsParamId" in the config file is not properly
>set. We don't expect any problems if obsParamId
> is correctly set because the data specified by obsParamId are included
>in the database (this requires active internet connection). Will you send
>me your configure file so that I can look at it?
>
>
>
>
>Thanks for your patience.
>
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>
>Sent: Saturday, May 31, 2014 11:58 PM
>To: Kim, Jinwon
>Cc: sanjay@tropmet.res.in<ma...@tropmet.res.in>;
>ramarao@tropmet.res.in<ma...@tropmet.res.in> <ma...@tropmet.res.in>>; Joyce, Michael J
>(398J); rcmes-dev;
>cameron.e.goodale@jpl.nasa.gov<ma...@jpl.nasa.gov> <ma...@jpl.nasa.gov>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>
>Hi Kim,
>
>Thank you for your help. I'm sorry but I'm getting confused with all
>these different packages I received from you and your colleagues!. The
>last one you just sent to me still contains params = db.getParams() in
>rcmet.py at line 194. I've replaced this file
> with the one sent by Cameron before and it seems to be ok. But when I've
>tried to reproduce the result you sent to me (with obsSource=1) I got
>this error :
>
>...
>data_prep is completed: both obs and mdl data are re-gridded to a common
>analysis grid
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>Do you know how can I fix this please?
>
>NOTE: with obsSource=0 I got :
>No input observation data file. EXIT
>
>Thanks and regards
>Rashyd
>
>
>
>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>>:
>To all,
>
>*** Please update your RCMET with the attached version 2.1.3. ***
>
>I found that some files included in the earlier tar file for the release
>version 2.1.3 have some critical issues. Now I've applied all fixes and
>successfully ran a test case with a MENA domain dataset; the version
>works properly now. I apologize for inconvenience.
>
>Rashyd:
>Please see the two attached figures for the MENA domain (model bias, GPCP
>climatology for 1991-2000 over the MENA domain) for your reference. The
>configure file for this processing is:
>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>domain has been adjusted to fit the MENA domain.
>
>
>Aanjay and Rama:
>The code also works fine with the India domain. The two attached figures
>for the India domain shows the TRMM climatology for 98-2000 and the bias
>of model ensemble against TRMM for the same period. The sample configure
>file is: cordexIndia.cfg under resources/
> (the same location as the MENA config file).
>
>Please contact me/mike/rcmes-dev if you have any questions.
>
>
>With best regards,
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>>]
>
>Sent: Thursday, May 29, 2014 12:07 AM
>To: Kim, Jinwon
>Cc: Joyce, Michael J (398J); rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>The package you've just sent to me contains the same rcmet.py as the
>package 2.1.2 and has on line 194 :
> params = db.getParams()
>
>Is it the right one? Because I'm still having the same error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>I've attached one of the files that I'm trying to use.
>
>Thanks again
>Rashyd
>
>
>
>
>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.ed>
>u<ma...@atmos.ucla.edu>>>>:
>Here comes the attachment.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>
><ma...@atmos.ucla.edu>>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mail
>to:zaaboul@gmail.com<ma...@gmail.com>>>]
>
>Sent: Wednesday, May 28, 2014 10:27 PM
>To: Joyce, Michael J (398J)
>Cc: Kim, Jinwon; rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>
>With the new Jinwon's RCMET version 2.1.3 I got this error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>My
>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rcm
>es
>
>I'm using files for precipitation exactly as I download them from ESGF
>portal for CORDEX MENA domain. The files I'm using are :
>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>198012.nc<http://198012.nc>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>199012.nc<http://199012.nc>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>200012.nc<http://200012.nc>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>200512.nc<http://200512.nc>
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-198012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-199012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-200012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-200512
>.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-1
>98012.nc<http://98012.nc>
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-1
>99012.nc<http://99012.nc>
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-2
>00012.nc<http://00012.nc>
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-2
>00512.nc<http://00512.nc>
>
>
>Do I have to pre-process this data first before I can use it with RCMET ?
>
>I've attached my config file to check if I'm missing something.
>
>Thanks for your help
>
>Rashyd
>
>
>
>
>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
><Mi...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:M<mailto:M>
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>:
>Hi Rashyd,
>
>It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
>released a newer version that may resolve some of your problems. You can
>find and download it at [1]. I¹m sure Jinwon will be able to help you get
>this resolved. Thank you for sending the
> document you used. I¹ll be sure to get it and the website updated with
>the correct information.
>
>[1]
>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>
>Thanks much!
>
>--
>Michael J. Joyce
>Engineering Applications Software Engineer
>Instrument Software and Science Data Systems
>NASA Jet Propulsion Laboratory
>California Institute of Technology
>4800 Oak Grove Drive
>Pasadena, California 91109
>Mail Stop: 158-242
>Tel: (818) 354-7550
>Fax: (818) 393-1370
>
>
>
>From: Rashyd ZAABOUL
><za...@gmail.com><mail
>to:zaaboul@gmail.com<ma...@gmail.com>><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>>>
>Date: Wednesday, May 28, 2014 at 5:09 AM
>
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.ed>
>u<ma...@atmo>
>s.ucla.edu<ht...@atmos.ucla.edu>>>>>
>Cc: rcmes-dev
><rc...@jp>
>l.nasa.gov<ht...@jpl.nasa.gov><m
>ailto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-d<mailto:rcmes-d>
>ev@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>,
> JPL
><Mi...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:M<mailto:M>
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Jim and Michael,
>
>I've modified the script
>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>json.loads function by simplejson.loads one to get more details on the
>error and this is what I got :
>
>Running using config file: ../rcmes/resources/mena.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>line 27, in getParams
> paramDict = simplejson.loads(httpRequest.text)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> return _default_decoder.decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> obj, end = self.raw_decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> return self.scan_once(s, idx=_w(s, idx).end())
>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>(char 0)
>
>What does this error mean ? I'm afraid the database RCMED is down while
>I'm trying to get data out of it !
>
>Best regards
>Rashyd
>
>
>
>
>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
><jk...@atmos.ucla.ed>
>u<ma...@atmo>
>s.ucla.edu<ht...@atmos.ucla.edu>>>>>:
>Thanks for your interests.
>
>For organizing your data:
>
>You can put your model data in your own directory. Then specify the link
>to the data (or data files) in the configure file, [MODEL] block. The
>code currently takes netcdf format files for input.
>
>If you use the observed data in the RCMES database, just specify the
>parameter numbers in the [RCMED] block, also in the configure file. If
>you use your own observation data, you can specify it in the same block
>(it also takes netcdf-format files).
>
>Hope this helps.
>
>
>With best regards,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>
><ma...@atmos>
>.ucla.edu<ht...@atmos.ucla.edu>>>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mail
>to:zaaboul@gmail.com<ma...@gmail.com>><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>>]
>Sent: Tuesday, May 27, 2014 7:59 AM
>
>To:
>rcmes-dev@jpl.nasa.gov<ma...@jpl>
>.nasa.gov<ht...@jpl.nasa.gov><ma
>ilto:rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-de<mailto:rcmes-de>
>v@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>Subject: failed to run rcmes following the step-by-step document
>
>Hi
>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>TRMM ... I followed the step-by-step document but it seems that something
>is missing there. For example it doesn't tell how to organize my data?
>where to put the observations ...
>
>Could you please provide me with any useful documentation that can help
>me setup RCMES to evaluate those models?
>
>Thanks
>Rashyd
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<mailto:r.zaa>
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto:r.zaaboul>
>@biosaline.org.ae<ht...@bios>
>aline.org.ae<ht...@biosali>
>ne.org.ae<ht...@biosaline.or>
>g.ae<ht...@biosaline.org.ae>
><ma...@biosaline.org.ae><mail
>to:r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<mailto:r.zaa>
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto:r.zaaboul>
>@biosaline.org.ae<ht...@bios>
>aline.org.ae<ht...@biosaline.org.ae>>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<mailto:r.zaa>
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul<mailto:r.zaaboul>
>@biosaline.org.ae<ht...@bios>
>aline.org.ae<ht...@biosaline.org.ae>>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaa<mailto:r.zaa>
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
>
>
>
>
>
>
>
>
>--
>Rashyd Zaaboul
>
>Climate and Water Modeling Scientist
>
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
>
>
--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
Please consider the environment before printing this e-mail
Re: failed to run rcmes following the step-by-step document
Posted by Rashyd ZAABOUL <za...@gmail.com>.
Hi all,
It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
... Now I've two questions :
- Is it possible to compute PDFs and CDFs and other metrics?
- Is it possible to compute these metrics on other parameters such as 2m
temperature, 500mb height, wind at different levels to compare with
reanalysis for example?
Best regards
Rashyd
2014-06-01 12:50 GMT-04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
> The problem was the correct rcmet.py was not copied to
> "rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
> "rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
> will resolve this problem. I've always run rcmet from
> "rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
> Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
> the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
> -----------------------------------------------------------------
> Jinwon Kim
> Joint Institute for Regional Earth System Science and Engineering and
> Dept. Atmospheric and Oceanic Sciences
> University of California, Los Angeles
> 607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> 90095-7228, USA
> jkim@atmos.ucla.edu; 310-206-2828
> ________________________________________
> From: Mattmann, Chris A (3980) [chris.a.mattmann@jpl.nasa.gov]
> Sent: Sunday, June 01, 2014 9:43 AM
> To: Rashyd ZAABOUL; Kim, Jinwon
> Cc: sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce, Michael J
> (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org;
> Mcgibbney, Lewis J (398J)
> Subject: Re: failed to run rcmes following the step-by-step document
>
> Hi Rashyd,
>
> I'm CC'ing the Apache list for the Open Climate Workbench project where
> we have a lot of eyes on the list. Maybe someone on the Apache list can
> help as well.
>
> Also we are happy to have a Skype/telecon with you this week to get
> your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
> work with Rashyd to get his problem fixed.
>
> Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
> Paul help out on this - they'll take it from here.
>
> Cheers,
> Chris
>
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Chris Mattmann, Ph.D.
> Chief Architect
> Instrument Software and Science Data Systems Section (398)
> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
> Office: 168-519, Mailstop: 168-5th floor
> Email: chris.a.mattmann@nasa.gov
> WWW: http://sunset.usc.edu/~mattmann/
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Adjunct Associate Professor, Computer Science Department
> University of Southern California, Los Angeles, CA 90089 USA
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
> -----Original Message-----
> From: Rashyd ZAABOUL <za...@gmail.com>
> Date: Sunday, June 1, 2014 2:31 AM
> To: "Kim, Jinwon (329M-Affiliate)" <jk...@atmos.ucla.edu>
> Cc: "sanjay@tropmet.res.in" <sa...@tropmet.res.in>,
> "ramarao@tropmet.res.in" <ra...@tropmet.res.in>, "Joyce, Michael J
> (398J)" <Mi...@jpl.nasa.gov>, rcmes-dev
> <rc...@jpl.nasa.gov>, "Goodale, Cameron E (398J)"
> <ca...@jpl.nasa.gov>
> Subject: Re: failed to run rcmes following the step-by-step document
>
> >Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
> >contains params = db.getParams() on line 194 !!!
> >
> >
> >I've tried this tar file which is equal to the previous one (I've
> >modified the line 194 in rcmet.py) and I've got the same error:
> >
> >
> >File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
> >
> >(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
> >atName,obsTimeName,obsTimestep,gridBox,models)
> >ValueError: too many values to unpack
> >
> >
> >
> >
> >Regards
> >Rashyd
> >
> >
> >
> >2014-06-01 11:26 GMT+04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
> >
> >Hmm, I checked the tar file I sent - all files are OK. I'm sending the
> >tar file again. Please check this one out. Please clean up previous
> >versions and try the attached one with the included config file
> >(cordexMENA.cfg). This is the code/config file I used
> > to create the figures I sent in the earlier e-mail.
> >
> >For your error messages:
> >
> >(1) The parameter "obsSource" directs the code where to find observation
> >data for evaluation. "obsSource=1" is reserved for the case users provide
> >their own observation data. If you set obsSource=1 and do not provide
> >data, it will result in error exit as the
> > code cannot find the observation data file(s) specified by the user.
> >Thus, unless you provide your own observation data, obsSource=1 must not
> >be used.
> >
> >(2) The exit message "No input observation data file. EXIT" occurs when
> >there is no observation data file id's are assigned when obsSource=0 is
> >set. This can happen if "obsParamId" in the config file is not properly
> >set. We don't expect any problems if obsParamId
> > is correctly set because the data specified by obsParamId are included
> >in the database (this requires active internet connection). Will you send
> >me your configure file so that I can look at it?
> >
> >
> >
> >
> >Thanks for your patience.
> >
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >jkim@atmos.ucla.edu; 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL [zaaboul@gmail.com]
> >
> >Sent: Saturday, May 31, 2014 11:58 PM
> >To: Kim, Jinwon
> >Cc: sanjay@tropmet.res.in;
> >ramarao@tropmet.res.in <ma...@tropmet.res.in>; Joyce, Michael J
> >(398J); rcmes-dev;
> >cameron.e.goodale@jpl.nasa.gov <ma...@jpl.nasa.gov>
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >
> >Hi Kim,
> >
> >Thank you for your help. I'm sorry but I'm getting confused with all
> >these different packages I received from you and your colleagues!. The
> >last one you just sent to me still contains params = db.getParams() in
> >rcmet.py at line 194. I've replaced this file
> > with the one sent by Cameron before and it seems to be ok. But when I've
> >tried to reproduce the result you sent to me (with obsSource=1) I got
> >this error :
> >
> >...
> >data_prep is completed: both obs and mdl data are re-gridded to a common
> >analysis grid
> >Traceback (most recent call last):
> > File "rcmet.py", line 299, in <module>
> > runUsingConfig(args.CONFIG)
> > File "rcmet.py", line 237, in runUsingConfig
> >
> >(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
> >atName,obsTimeName,obsTimestep,gridBox,models)
> >ValueError: too many values to unpack
> >
> >Do you know how can I fix this please?
> >
> >NOTE: with obsSource=0 I got :
> >No input observation data file. EXIT
> >
> >Thanks and regards
> >Rashyd
> >
> >
> >
> >2014-05-29 20:08 GMT+04:00 Kim, Jinwon
> ><jk...@atmos.ucla.edu>>:
> >To all,
> >
> >*** Please update your RCMET with the attached version 2.1.3. ***
> >
> >I found that some files included in the earlier tar file for the release
> >version 2.1.3 have some critical issues. Now I've applied all fixes and
> >successfully ran a test case with a MENA domain dataset; the version
> >works properly now. I apologize for inconvenience.
> >
> >Rashyd:
> >Please see the two attached figures for the MENA domain (model bias, GPCP
> >climatology for 1991-2000 over the MENA domain) for your reference. The
> >configure file for this processing is:
> >"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
> >domain has been adjusted to fit the MENA domain.
> >
> >
> >Aanjay and Rama:
> >The code also works fine with the India domain. The two attached figures
> >for the India domain shows the TRMM climatology for 98-2000 and the bias
> >of model ensemble against TRMM for the same period. The sample configure
> >file is: cordexIndia.cfg under resources/
> > (the same location as the MENA config file).
> >
> >Please contact me/mike/rcmes-dev if you have any questions.
> >
> >
> >With best regards,
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
> >
> >Sent: Thursday, May 29, 2014 12:07 AM
> >To: Kim, Jinwon
> >Cc: Joyce, Michael J (398J); rcmes-dev
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi Michael,
> >The package you've just sent to me contains the same rcmet.py as the
> >package 2.1.2 and has on line 194 :
> > params = db.getParams()
> >
> >Is it the right one? Because I'm still having the same error :
> >
> >Running using config file: ../rcmes/resources/cordexAF.cfg
> >Traceback (most recent call last):
> > File "rcmet.py", line 299, in <module>
> > runUsingConfig(args.CONFIG)
> > File "rcmet.py", line 194, in runUsingConfig
> > params = db.getParams()
> >AttributeError: 'module' object has no attribute 'getParams'
> >
> >I've attached one of the files that I'm trying to use.
> >
> >Thanks again
> >Rashyd
> >
> >
> >
> >
> >2014-05-29 10:29 GMT+04:00 Kim, Jinwon
> ><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >u<ma...@atmos.ucla.edu>>>:
> >Here comes the attachment.
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu
> ><ma...@atmos.ucla.edu>>;
> > 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL
> >[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <mail
> >to:zaaboul@gmail.com>>]
> >
> >Sent: Wednesday, May 28, 2014 10:27 PM
> >To: Joyce, Michael J (398J)
> >Cc: Kim, Jinwon; rcmes-dev
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi Michael,
> >
> >With the new Jinwon's RCMET version 2.1.3 I got this error :
> >
> >Running using config file: ../rcmes/resources/cordexAF.cfg
> >Traceback (most recent call last):
> > File "rcmet.py", line 299, in <module>
> > runUsingConfig(args.CONFIG)
> > File "rcmet.py", line 194, in runUsingConfig
> > params = db.getParams()
> >AttributeError: 'module' object has no attribute 'getParams'
> >
> >My
> >PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rcm
> >es
> >
> >I'm using files for precipitation exactly as I download them from ESGF
> >portal for CORDEX MENA domain. The files I'm using are :
> >
> >pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
> >198012.nc
> >pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
> >199012.nc
> >pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
> >200012.nc
> >pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
> >200512.nc
> >pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-198012
> >.nc
> >pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-199012
> >.nc
> >pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-200012
> >.nc
> >pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-200512
> >.nc
> >pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-1
> >98012.nc
> >pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-1
> >99012.nc
> >pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-2
> >00012.nc
> >pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-2
> >00512.nc
> >
> >
> >Do I have to pre-process this data first before I can use it with RCMET ?
> >
> >I've attached my config file to check if I'm missing something.
> >
> >Thanks for your help
> >
> >Rashyd
> >
> >
> >
> >
> >2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
> ><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> M
> >ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>:
> >Hi Rashyd,
> >
> >It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
> >released a newer version that may resolve some of your problems. You can
> >find and download it at [1]. I¹m sure Jinwon will be able to help you get
> >this resolved. Thank you for sending the
> > document you used. I¹ll be sure to get it and the website updated with
> >the correct information.
> >
> >[1]
> >https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
> ><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
> >
> >Thanks much!
> >
> >--
> >Michael J. Joyce
> >Engineering Applications Software Engineer
> >Instrument Software and Science Data Systems
> >NASA Jet Propulsion Laboratory
> >California Institute of Technology
> >4800 Oak Grove Drive
> >Pasadena, California 91109
> >Mail Stop: 158-242
> >Tel: (818) 354-7550
> >Fax: (818) 393-1370
> >
> >
> >
> >From: Rashyd ZAABOUL
> ><za...@gmail.com><mailto:zaaboul@gmail.com
> <mail
> >to:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
> ><
> >mailto:zaaboul@gmail.com<ma...@gmail.com>>>>
> >Date: Wednesday, May 28, 2014 at 5:09 AM
> >
> >To: "Kim, Jinwon (329M-Affiliate)"
> ><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmo
> >s.ucla.edu><ma...@atmos.ucla.edu>>>>
> >Cc: rcmes-dev
> ><rc...@jpl.nasa.gov><mailto:
> rcmes-dev@jp
> >l.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov
> <m
> >ailto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-d
> >ev@jpl.nasa.gov>>>>,
> > JPL
> ><Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> ><mailto:
> >Michael.J.Joyce@jpl.nasa.gov<mailto:Michael.J.Joyce@jpl.nasa.gov
> >><mailto:
> >Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> M
> >ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
> >Subject: Re: failed to run rcmes following the step-by-step document
> >
> >Hi Jim and Michael,
> >
> >I've modified the script
> >~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
> >json.loads function by simplejson.loads one to get more details on the
> >error and this is what I got :
> >
> >Running using config file: ../rcmes/resources/mena.cfg
> >Traceback (most recent call last):
> > File "rcmet.py", line 299, in <module>
> > runUsingConfig(args.CONFIG)
> > File "rcmet.py", line 194, in runUsingConfig
> > params = db.getParams()
> > File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
> >line 27, in getParams
> > paramDict = simplejson.loads(httpRequest.text)
> > File
> >"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
> >inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> > return _default_decoder.decode(s)
> > File
> >"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
> >inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> > obj, end = self.raw_decode(s)
> > File
> >"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
> >inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> > return self.scan_once(s, idx=_w(s, idx).end())
> >simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
> >(char 0)
> >
> >What does this error mean ? I'm afraid the database RCMED is down while
> >I'm trying to get data out of it !
> >
> >Best regards
> >Rashyd
> >
> >
> >
> >
> >2014-05-27 8:13 GMT-07:00 Kim, Jinwon
> ><jk...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.ed
> >u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmo
> >s.ucla.edu><ma...@atmos.ucla.edu>>>>:
> >Thanks for your interests.
> >
> >For organizing your data:
> >
> >You can put your model data in your own directory. Then specify the link
> >to the data (or data files) in the configure file, [MODEL] block. The
> >code currently takes netcdf format files for input.
> >
> >If you use the observed data in the RCMES database, just specify the
> >parameter numbers in the [RCMED] block, also in the configure file. If
> >you use your own observation data, you can specify it in the same block
> >(it also takes netcdf-format files).
> >
> >Hope this helps.
> >
> >
> >With best regards,
> >
> >-----------------------------------------------------------------
> >Jinwon Kim
> >Joint Institute for Regional Earth System Science and Engineering and
> >Dept. Atmospheric and Oceanic Sciences
> >University of California, Los Angeles
> >607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
> >90095-7228, USA
> >
> >jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:
> jkim@atmos.ucla.edu
> ><ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:
> jkim@atmos
> >.ucla.edu><ma...@atmos.ucla.edu>>>;
> > 310-206-2828
> >________________________________________
> >From: Rashyd ZAABOUL
> >[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com
> <mail
> >to:zaaboul@gmail.com>><mailto:zaaboul@gmail.com<mailto:zaaboul@gmail.com
> ><
> >mailto:zaaboul@gmail.com<ma...@gmail.com>>>]
> >Sent: Tuesday, May 27, 2014 7:59 AM
> >
> >To:
> >rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:
> rcmes-dev@jpl
> >.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov
> <ma
> >ilto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:
> rcmes-de
> >v@jpl.nasa.gov>>>
> >Subject: failed to run rcmes following the step-by-step document
> >
> >Hi
> >I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
> >TRMM ... I followed the step-by-step document but it seems that something
> >is missing there. For example it doesn't tell how to organize my data?
> >where to put the observations ...
> >
> >Could you please provide me with any useful documentation that can help
> >me setup RCMES to evaluate those models?
> >
> >Thanks
> >Rashyd
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaa
> >boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
> r.zaaboul
> >@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >aline.org.ae<ma...@biosaline.org.ae>>><mailto:
> r.zaaboul@biosali
> >ne.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@biosaline.or
> >g.ae<ma...@biosaline.org.ae>><mailto:
> r.zaaboul@biosaline.org.ae
> ><ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.ae
> <mail
> >to:r.zaaboul@biosaline.org.ae>>>>
> >
> >Please consider the environment before printing this e-mail
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaa
> >boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
> r.zaaboul
> >@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >aline.org.ae<ma...@biosaline.org.ae>>>
> >
> >Please consider the environment before printing this e-mail
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaa
> >boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:
> r.zaaboul
> >@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaaboul@bios
> >aline.org.ae<ma...@biosaline.org.ae>>>
> >
> >Please consider the environment before printing this e-mail
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:
> r.zaa
> >boul@biosaline.org.ae<ma...@biosaline.org.ae>>
> >
> >Please consider the environment before printing this e-mail
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >Climate and Water Modeling Scientist
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
> >
> >Please consider the environment before printing this e-mail
> >
> >
> >
> >
> >
> >
> >
> >
> >--
> >Rashyd Zaaboul
> >
> >Climate and Water Modeling Scientist
> >
> >International Center for Biosaline Agriculture
> >P.O. Box 14660 Dubai, UAE
> >Mobile : +971 50 675 2007
> >Office : +971 4 336 1100 x 259
> >
> >r.zaaboul@biosaline.org.ae
> >
> >Please consider the environment before printing this e-mail
> >
> >
>
>
--
Rashyd Zaaboul
*Climate and Water Modeling Scientist*
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile : +971 50 675 2007
Office : +971 4 336 1100 x 259
r.zaaboul@biosaline.org.ae
*Please consider the environment before printing this e-mail*
RE: failed to run rcmes following the step-by-step document
Posted by "Kim, Jinwon" <jk...@atmos.ucla.edu>.
The problem was the correct rcmet.py was not copied to "rcmet2.1.3/src/main/python/bin". Copying rcmet.py in "rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin" will resolve this problem. I've always run rcmet from "rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 90095-7228, USA
jkim@atmos.ucla.edu; 310-206-2828
________________________________________
From: Mattmann, Chris A (3980) [chris.a.mattmann@jpl.nasa.gov]
Sent: Sunday, June 01, 2014 9:43 AM
To: Rashyd ZAABOUL; Kim, Jinwon
Cc: sanjay@tropmet.res.in; ramarao@tropmet.res.in; Joyce, Michael J (398J); rcmes-dev; Goodale, Cameron E (398J); dev@climate.apache.org; Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document
Hi Rashyd,
I'm CC'ing the Apache list for the Open Climate Workbench project where
we have a lot of eyes on the list. Maybe someone on the Apache list can
help as well.
Also we are happy to have a Skype/telecon with you this week to get
your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
work with Rashyd to get his problem fixed.
Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
Paul help out on this - they'll take it from here.
Cheers,
Chris
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: chris.a.mattmann@nasa.gov
WWW: http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
-----Original Message-----
From: Rashyd ZAABOUL <za...@gmail.com>
Date: Sunday, June 1, 2014 2:31 AM
To: "Kim, Jinwon (329M-Affiliate)" <jk...@atmos.ucla.edu>
Cc: "sanjay@tropmet.res.in" <sa...@tropmet.res.in>,
"ramarao@tropmet.res.in" <ra...@tropmet.res.in>, "Joyce, Michael J
(398J)" <Mi...@jpl.nasa.gov>, rcmes-dev
<rc...@jpl.nasa.gov>, "Goodale, Cameron E (398J)"
<ca...@jpl.nasa.gov>
Subject: Re: failed to run rcmes following the step-by-step document
>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>contains params = db.getParams() on line 194 !!!
>
>
>I've tried this tar file which is equal to the previous one (I've
>modified the line 194 in rcmet.py) and I've got the same error:
>
>
>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>
>
>
>Regards
>Rashyd
>
>
>
>2014-06-01 11:26 GMT+04:00 Kim, Jinwon <jk...@atmos.ucla.edu>:
>
>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>tar file again. Please check this one out. Please clean up previous
>versions and try the attached one with the included config file
>(cordexMENA.cfg). This is the code/config file I used
> to create the figures I sent in the earlier e-mail.
>
>For your error messages:
>
>(1) The parameter "obsSource" directs the code where to find observation
>data for evaluation. "obsSource=1" is reserved for the case users provide
>their own observation data. If you set obsSource=1 and do not provide
>data, it will result in error exit as the
> code cannot find the observation data file(s) specified by the user.
>Thus, unless you provide your own observation data, obsSource=1 must not
>be used.
>
>(2) The exit message "No input observation data file. EXIT" occurs when
>there is no observation data file id's are assigned when obsSource=0 is
>set. This can happen if "obsParamId" in the config file is not properly
>set. We don't expect any problems if obsParamId
> is correctly set because the data specified by obsParamId are included
>in the database (this requires active internet connection). Will you send
>me your configure file so that I can look at it?
>
>
>
>
>Thanks for your patience.
>
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>jkim@atmos.ucla.edu; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com]
>
>Sent: Saturday, May 31, 2014 11:58 PM
>To: Kim, Jinwon
>Cc: sanjay@tropmet.res.in;
>ramarao@tropmet.res.in <ma...@tropmet.res.in>; Joyce, Michael J
>(398J); rcmes-dev;
>cameron.e.goodale@jpl.nasa.gov <ma...@jpl.nasa.gov>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>
>Hi Kim,
>
>Thank you for your help. I'm sorry but I'm getting confused with all
>these different packages I received from you and your colleagues!. The
>last one you just sent to me still contains params = db.getParams() in
>rcmet.py at line 194. I've replaced this file
> with the one sent by Cameron before and it seems to be ok. But when I've
>tried to reproduce the result you sent to me (with obsSource=1) I got
>this error :
>
>...
>data_prep is completed: both obs and mdl data are re-gridded to a common
>analysis grid
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 237, in runUsingConfig
>
>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obsL
>atName,obsTimeName,obsTimestep,gridBox,models)
>ValueError: too many values to unpack
>
>Do you know how can I fix this please?
>
>NOTE: with obsSource=0 I got :
>No input observation data file. EXIT
>
>Thanks and regards
>Rashyd
>
>
>
>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.edu>>:
>To all,
>
>*** Please update your RCMET with the attached version 2.1.3. ***
>
>I found that some files included in the earlier tar file for the release
>version 2.1.3 have some critical issues. Now I've applied all fixes and
>successfully ran a test case with a MENA domain dataset; the version
>works properly now. I apologize for inconvenience.
>
>Rashyd:
>Please see the two attached figures for the MENA domain (model bias, GPCP
>climatology for 1991-2000 over the MENA domain) for your reference. The
>configure file for this processing is:
>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>domain has been adjusted to fit the MENA domain.
>
>
>Aanjay and Rama:
>The code also works fine with the India domain. The two attached figures
>for the India domain shows the TRMM climatology for 98-2000 and the bias
>of model ensemble against TRMM for the same period. The sample configure
>file is: cordexIndia.cfg under resources/
> (the same location as the MENA config file).
>
>Please contact me/mike/rcmes-dev if you have any questions.
>
>
>With best regards,
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [zaaboul@gmail.com<ma...@gmail.com>]
>
>Sent: Thursday, May 29, 2014 12:07 AM
>To: Kim, Jinwon
>Cc: Joyce, Michael J (398J); rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>The package you've just sent to me contains the same rcmet.py as the
>package 2.1.2 and has on line 194 :
> params = db.getParams()
>
>Is it the right one? Because I'm still having the same error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>I've attached one of the files that I'm trying to use.
>
>Thanks again
>Rashyd
>
>
>
>
>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>>>:
>Here comes the attachment.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu
><ma...@atmos.ucla.edu>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>>]
>
>Sent: Wednesday, May 28, 2014 10:27 PM
>To: Joyce, Michael J (398J)
>Cc: Kim, Jinwon; rcmes-dev
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Michael,
>
>With the new Jinwon's RCMET version 2.1.3 I got this error :
>
>Running using config file: ../rcmes/resources/cordexAF.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
>AttributeError: 'module' object has no attribute 'getParams'
>
>My
>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rcm
>es
>
>I'm using files for precipitation exactly as I download them from ESGF
>portal for CORDEX MENA domain. The files I'm using are :
>
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>198012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>199012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>200012.nc
>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>200512.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-198012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-199012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-200012
>.nc
>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-200512
>.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-1
>98012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-1
>99012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-2
>00012.nc
>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-2
>00512.nc
>
>
>Do I have to pre-process this data first before I can use it with RCMET ?
>
>I've attached my config file to check if I'm missing something.
>
>Thanks for your help
>
>Rashyd
>
>
>
>
>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:M
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>:
>Hi Rashyd,
>
>It looks like your¹e using one of Jinwon¹s RCMET versions. He recently
>released a newer version that may resolve some of your problems. You can
>find and download it at [1]. I¹m sure Jinwon will be able to help you get
>this resolved. Thank you for sending the
> document you used. I¹ll be sure to get it and the website updated with
>the correct information.
>
>[1]
>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>
>Thanks much!
>
>--
>Michael J. Joyce
>Engineering Applications Software Engineer
>Instrument Software and Science Data Systems
>NASA Jet Propulsion Laboratory
>California Institute of Technology
>4800 Oak Grove Drive
>Pasadena, California 91109
>Mail Stop: 158-242
>Tel: (818) 354-7550
>Fax: (818) 393-1370
>
>
>
>From: Rashyd ZAABOUL
><za...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>><ma...@gmail.com><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>>
>Date: Wednesday, May 28, 2014 at 5:09 AM
>
>To: "Kim, Jinwon (329M-Affiliate)"
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmo
>s.ucla.edu><ma...@atmos.ucla.edu>>>>
>Cc: rcmes-dev
><rc...@jpl.nasa.gov><mailto:rcmes-dev@jp
>l.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov<m
>ailto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-d
>ev@jpl.nasa.gov>>>>,
> JPL
><Mi...@jpl.nasa.gov><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>><mailto:
>Michael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:M
>ichael.J.Joyce@jpl.nasa.gov<ma...@jpl.nasa.gov>>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Jim and Michael,
>
>I've modified the script
>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>json.loads function by simplejson.loads one to get more details on the
>error and this is what I got :
>
>Running using config file: ../rcmes/resources/mena.cfg
>Traceback (most recent call last):
> File "rcmet.py", line 299, in <module>
> runUsingConfig(args.CONFIG)
> File "rcmet.py", line 194, in runUsingConfig
> params = db.getParams()
> File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>line 27, in getParams
> paramDict = simplejson.loads(httpRequest.text)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
> return _default_decoder.decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
> obj, end = self.raw_decode(s)
> File
>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-l
>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
> return self.scan_once(s, idx=_w(s, idx).end())
>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>(char 0)
>
>What does this error mean ? I'm afraid the database RCMED is down while
>I'm trying to get data out of it !
>
>Best regards
>Rashyd
>
>
>
>
>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
><jk...@atmos.ucla.edu><mailto:jkim@atmos.ucla.ed
>u<ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmo
>s.ucla.edu><ma...@atmos.ucla.edu>>>>:
>Thanks for your interests.
>
>For organizing your data:
>
>You can put your model data in your own directory. Then specify the link
>to the data (or data files) in the configure file, [MODEL] block. The
>code currently takes netcdf format files for input.
>
>If you use the observed data in the RCMES database, just specify the
>parameter numbers in the [RCMED] block, also in the configure file. If
>you use your own observation data, you can specify it in the same block
>(it also takes netcdf-format files).
>
>Hope this helps.
>
>
>With best regards,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>
>jkim@atmos.ucla.edu<ma...@atmos.ucla.edu><mailto:jkim@atmos.ucla.edu
><ma...@atmos.ucla.edu>><mailto:jkim@atmos.ucla.edu<mailto:jkim@atmos
>.ucla.edu><ma...@atmos.ucla.edu>>>;
> 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL
>[zaaboul@gmail.com<ma...@gmail.com><mailto:zaaboul@gmail.com<mail
>to:zaaboul@gmail.com>><ma...@gmail.com><
>mailto:zaaboul@gmail.com<ma...@gmail.com>>>]
>Sent: Tuesday, May 27, 2014 7:59 AM
>
>To:
>rcmes-dev@jpl.nasa.gov<ma...@jpl.nasa.gov><mailto:rcmes-dev@jpl
>.nasa.gov<ma...@jpl.nasa.gov>><mailto:rcmes-dev@jpl.nasa.gov<ma
>ilto:rcmes-dev@jpl.nasa.gov><mailto:rcmes-dev@jpl.nasa.gov<mailto:rcmes-de
>v@jpl.nasa.gov>>>
>Subject: failed to run rcmes following the step-by-step document
>
>Hi
>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>TRMM ... I followed the step-by-step document but it seems that something
>is missing there. For example it doesn't tell how to organize my data?
>where to put the observations ...
>
>Could you please provide me with any useful documentation that can help
>me setup RCMES to evaluate those models?
>
>Thanks
>Rashyd
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>><mailto:r.zaaboul@biosali
>ne.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.or
>g.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul@biosaline.org.ae
><ma...@biosaline.org.ae><mailto:r.zaaboul@biosaline.org.ae<mail
>to:r.zaaboul@biosaline.org.ae>>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>><mailto:r.zaaboul
>@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaaboul@bios
>aline.org.ae<ma...@biosaline.org.ae>>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae><mailto:r.zaa
>boul@biosaline.org.ae<ma...@biosaline.org.ae>>
>
>Please consider the environment before printing this e-mail
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>r.zaaboul@biosaline.org.ae<ma...@biosaline.org.ae>
>
>Please consider the environment before printing this e-mail
>
>
>
>
>
>
>
>
>--
>Rashyd Zaaboul
>
>Climate and Water Modeling Scientist
>
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>
>r.zaaboul@biosaline.org.ae
>
>Please consider the environment before printing this e-mail
>
>