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Posted to issues@arrow.apache.org by "Mathias5 (via GitHub)" <gi...@apache.org> on 2024/04/08 09:29:18 UTC
[I] Issue to install pyarrow and pandas together in a conda environment [arrow]
Mathias5 opened a new issue, #41067:
URL: https://github.com/apache/arrow/issues/41067
### Describe the bug, including details regarding any error messages, version, and platform.
Hi,
since a few days when I create a conda environment with pyarrow and pandas, I get a segmentation fault when loading pandas.
To replicate:
conda create -n test python pyarrow pandas
conda activate test
python
import pandas
This leads to a segmentation fault.
### Component(s)
Python
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Re: [I] [Python] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "jorisvandenbossche (via GitHub)" <gi...@apache.org>.
jorisvandenbossche commented on issue #41067:
URL: https://github.com/apache/arrow/issues/41067#issuecomment-2042310203
If that was the issue, that should be solved now when recreating a fresh environment, see https://github.com/apache/arrow/issues/41058
But, that issue should only have occurred since yesterday, and not for a "few days" (and it's also not a segmentation fault)
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Re: [I] [Python] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "Mathias5 (via GitHub)" <gi...@apache.org>.
Mathias5 commented on issue #41067:
URL: https://github.com/apache/arrow/issues/41067#issuecomment-2042427798
The issue has been resolved, see https://github.com/apache/arrow/issues/41058
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Re: [I] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "jorisvandenbossche (via GitHub)" <gi...@apache.org>.
jorisvandenbossche commented on issue #41067:
URL: https://github.com/apache/arrow/issues/41067#issuecomment-2042288147
Can you show the output of `conda list`? Do you see any traceback or error message besides "segmentation fault"?
This is _probably_ a conda packaging issue.
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Re: [I] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "xshirax (via GitHub)" <gi...@apache.org>.
xshirax commented on issue #41067:
URL: https://github.com/apache/arrow/issues/41067#issuecomment-2042301531
Hi. I believe the issue is related to new release of snappy 1.2.0
This issue is solved with snappy 1.1
I get same bug (segmentation fault). specifically:
File "/homes/.../.conda/envs/.../lib/python3.10/site-packages/pyarrow/__init__.py", line 65, in <module>
import pyarrow.lib as _lib
ImportError: /homes/.../.conda/envs/.../lib/python3.10/site-packages/pyarrow/../../.././liborc.so: undefined symbol: _ZN6snappy11RawCompressEPKcmPcPm
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Re: [I] [Python] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "Mathias5 (via GitHub)" <gi...@apache.org>.
Mathias5 closed issue #41067: [Python] Issue to install pyarrow and pandas together in a conda environment
URL: https://github.com/apache/arrow/issues/41067
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Re: [I] [Python] Issue to install pyarrow and pandas together in a conda environment [arrow]
Posted by "Mathias5 (via GitHub)" <gi...@apache.org>.
Mathias5 commented on issue #41067:
URL: https://github.com/apache/arrow/issues/41067#issuecomment-2042426981
Hi,
Indeed I think it started to happen yesterday and not "a few days ago" as I initially said.
And it did cause segmentation fault in my python env.
It seems like it has been resolved now, thanks for the update.
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