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Posted to jira@arrow.apache.org by "Leonard Lausen (Jira)" <ji...@apache.org> on 2021/01/24 23:18:00 UTC
[jira] [Commented] (ARROW-9773) [C++] Take kernel can't handle
ChunkedArrays that don't fit in an Array
[ https://issues.apache.org/jira/browse/ARROW-9773?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17271015#comment-17271015 ]
Leonard Lausen commented on ARROW-9773:
---------------------------------------
There is a similar issue with large tables (many rows) of medium size lists (~512 elements per list). When using `pa.list_` type, `take` will fail due to `offset overflow while concatenating arrays`. Using `pa.large_list` works. (But in practice it doesn't help as `.take` performs 3 orders of magnitude (~1s vs ~1ms) slower than indexing operations on pandas..)
> [C++] Take kernel can't handle ChunkedArrays that don't fit in an Array
> -----------------------------------------------------------------------
>
> Key: ARROW-9773
> URL: https://issues.apache.org/jira/browse/ARROW-9773
> Project: Apache Arrow
> Issue Type: Improvement
> Components: C++
> Affects Versions: 1.0.0
> Reporter: David Li
> Priority: Major
>
> Take() currently concatenates ChunkedArrays first. However, this breaks down when calling Take() from a ChunkedArray or Table where concatenating the arrays would result in an array that's too large. While inconvenient to implement, it would be useful if this case were handled.
> This could be done as a higher-level wrapper around Take(), perhaps.
> Example in Python:
> {code:python}
> >>> import pyarrow as pa
> >>> pa.__version__
> '1.0.0'
> >>> rb1 = pa.RecordBatch.from_arrays([["a" * 2**30]], names=["a"])
> >>> rb2 = pa.RecordBatch.from_arrays([["b" * 2**30]], names=["a"])
> >>> table = pa.Table.from_batches([rb1, rb2], schema=rb1.schema)
> >>> table.take([1, 0])
> Traceback (most recent call last):
> File "<stdin>", line 1, in <module>
> File "pyarrow/table.pxi", line 1145, in pyarrow.lib.Table.take
> File "/home/lidavidm/Code/twosigma/arrow/venv/lib/python3.8/site-packages/pyarrow/compute.py", line 268, in take
> return call_function('take', [data, indices], options)
> File "pyarrow/_compute.pyx", line 298, in pyarrow._compute.call_function
> File "pyarrow/_compute.pyx", line 192, in pyarrow._compute.Function.call
> File "pyarrow/error.pxi", line 122, in pyarrow.lib.pyarrow_internal_check_status
> File "pyarrow/error.pxi", line 84, in pyarrow.lib.check_status
> pyarrow.lib.ArrowInvalid: offset overflow while concatenating arrays
> {code}
> In this example, it would be useful if Take() or a higher-level wrapper could generate multiple record batches as output.
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