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Posted to jira@arrow.apache.org by "Karl Dunkle Werner (Jira)" <ji...@apache.org> on 2021/06/04 23:29:00 UTC
[jira] [Created] (ARROW-12981) Wish: Install source package from
CRAN alone
Karl Dunkle Werner created ARROW-12981:
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Summary: Wish: Install source package from CRAN alone
Key: ARROW-12981
URL: https://issues.apache.org/jira/browse/ARROW-12981
Project: Apache Arrow
Issue Type: Wish
Components: Packaging, R
Affects Versions: 4.0.1
Environment: Linux
Reporter: Karl Dunkle Werner
Hello,
I would like to install {{Arrow}} on Linux using only CRAN, without downloading additional files from Github, Apache, or Ursa Labs. I understand this is a big ask, and might not be a priority for you all. Feel free to close if you feel that this is out of scope.
Why is a CRAN-only installation useful?
# It's common for organizations to set up firewalls that prevent arbitrary downloads, but allow access to their own internal CRAN mirror.
** Sometimes these firewalls also allow requests to Github, but often not.
# On a broader level, my favorite thing about R is CRAN, the CRAN maintainers, and their [policy|https://cran.r-project.org/web/packages/policies.html#Source-packages] that "Source packages may not contain any form of binary executable code." By distributing most of the Arrow code separately (either as source C++ or a compiled library), automated code archives and other source-based tools become much less useful.
Of course, {{arrow}} isn't the only R package to depend on external libraries or distribute code separately. If a CRAN-only approach isn't viable, it would still be useful to have an all-offline method. I'm also having trouble getting an offline install to work, even with a local copy of the Arrow repo. (See the bottom of the script below.)
What does does installing offline look like now?
Here's a bash script that approximates installing behind a firewall.
{code:sh}
git clone --depth 1 git@github.com:apache/arrow.git test_arrow
cd test_arrow
wget 'https://cran.r-project.org/src/contrib/arrow_4.0.1.tar.gz'
# Set up a temporary R library (optional)
mkdir test_r_lib
export R_LIBS_USER=test_r_lib
export ARROW_R_DEV=true
export LIBARROW_MINIMAL=false
export LIBARROW_DOWNLOAD=false
export LIBARROW_BINARY=false
export LIBARROW_BUILD=true
# These are all of the direct dependencies, including Suggests
# This isn't required if the packages are already installed
Rscript -e "install.packages(c('assertthat', 'bit64', 'purrr', 'R6', 'rlang', 'tidyselect', 'vctrs', 'cpp11', 'decor', 'distro', 'dplyr', 'hms', 'knitr', 'lubridate', 'pkgload', 'reticulate', 'rmarkdown', 'stringr', 'testthat', 'tibble', 'withr'))"
# Disable your internet connection here.
# Now try to install the R package we downloaded with wget.
# This is an approximation of being behind a firewall.
Rscript -e 'install.packages("arrow_4.0.1.tar.gz", repos=NULL)'
# It successfully installs the R component, but not the C++ library,
# even with LIBARROW_BUILD=true
Rscript -e "arrow::arrow_available()"
# [1] FALSE
# As mentioned in the installation vignette,
# we can R CMD INSTALL in the git repo.
R CMD INSTALL r
# This will try to build the C++ library, but fails when mimalloc and
# jemalloc can't be downloaded from Github.
# (Seems not to be affected by LIBARROW_DOWNLOAD=false).
# When C++ compilation fails, the R component still installs.
{code}
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