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Posted to commits@ctakes.apache.org by se...@apache.org on 2020/09/25 01:04:47 UTC
svn commit: r1881995 [3/4] - in
/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased:
./ table/ term/ umls/ umls/abbreviation/ umls/file/
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Rela.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Rela.java?rev=1881995&view=auto
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--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Rela.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Rela.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,970 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.abbreviation;
+
+import java.util.Arrays;
+
+/**
+ * Relationship Attribute
+ * https:// www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/abbreviations.html
+ *
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 12/18/2018
+ */
+public enum Rela {
+ abnormal_cell_affected_by_chemical_or_drug, // abnormal cell affected by chemical or drug
+ abnormality_associated_with_allele, // abnormality associated with allele
+ access_device_used_by, // Access device used by
+ access_instrument_of, // Access instrument of
+ access_of, // Access of
+ active_ingredient_of, // Active ingredient of
+ active_metabolites_of, // Active metabolites of
+ active_moiety_of, // Active Moiety of
+ activity_of_allele, // activity of allele
+ actual_outcome_of, // Actual outcome of
+ add_on_code_for, // Add on code for (Report with)
+ adheres_to, // Adheres to
+ adjacent_to, // Adjacent to
+ adjectival_form_of, // Adjectival form of
+ adjustment_of, // Adjustment of
+ afferent_to, // Afferent to
+ alias_of, // Alias_of
+ allele_absent_from_wild_type_chromosomal_location( "allele_absent_from_wild-type_chromosomal_location" ), // allele absent from wild-type chromosomal location
+ allele_has_abnormality, // allele has abnormality
+ allele_has_activity, // allele has activity
+ allele_in_chromosomal_location, // allele in chromosomal location
+ allele_plays_altered_role_in_process, // allele plays altered role in process
+ allele_plays_role_in_metabolism_of_chemical_or_drug, // allele plays role in metabolism of chemical or drug
+ allelic_variant_of, // Allelic Variant of
+ alternative_of, // Alternative of
+ analyzed_by, // Analyzed by
+ analyzes, // Analyzes
+ anatomic_structure_has_location, // anatomic structure has location
+ anatomic_structure_is_physical_part_of, // anatomic structure is physical part of
+ anatomical_entity_observed_in, // anatomical entity observed in
+ anatomy_originated_from_biological_process, // anatomy originated from biological process
+ answer_to, // answer to
+ anterior_to, // anterior to
+ anteroinferior_to, // anteroinferior to
+ anterolateral_to, // anterolateral to
+ anteromedial_to, // anteromedial to
+ anterosuperior_to, // anterosuperior to
+ approach_of_excluded, // Approach of excluded
+ approach_of_possibly_included, // Approach of possibly included
+ approach_of, // Approach of
+ arterial_supply_of, // Arterial supply of
+ articulates_with, // Articulates with
+ associated_condition_of, // Associated condition of
+ associated_disease, // Associated disease
+ associated_etiologic_finding_of, // Associated etiologic finding of
+ associated_finding_of_excluded, // Associated finding of excluded
+ associated_finding_of_possibly_included, // Associated finding of possibly included
+ associated_finding_of, // Associated finding of
+ associated_function_of, // Associated function of
+ associated_genetic_condition, // Associated genetic condition
+ associated_morphology_of, // Associated morphology of
+ associated_procedure_of_excluded, // Associated procedure of excluded
+ associated_procedure_of_possibly_included, // Associated procedure of possibly included
+ associated_procedure_of, // Associated procedure of
+ associated_with_malfunction_of_gene_product, // associated with malfunction of gene product
+ associated_with, // Associated with
+ attaches_to, // Attaches to
+ basic_dose_form_of, // Basic dose form of
+ basis_of_strength_substance_of, // Basis of strength substance of
+ biological_process_has_associated_location, // biological process has associated location
+ biological_process_has_initiator_chemical_or_drug, // biological process has initiator chemical or drug
+ biological_process_has_initiator_process, // biological process has initiator process
+ biological_process_has_result_anatomy, // biological process has result anatomy
+ biological_process_has_result_biological_process, // biological process has result biological process
+ biological_process_has_result_chemical_or_drug, // biological process has result chemical or drug
+ biological_process_involves_chemical_or_drug, // biological process involves chemical or drug
+ biological_process_involves_gene_product, // biological process involves gene product
+ biological_process_is_part_of_process, // biological process is part of process
+ biological_process_results_from_biological_process, // biological process results from biological process
+ biomarker_type_includes_gene_product, // biomarker type includes gene product
+ biomarker_type_includes_gene, // biomarker type includes gene
+ bounded_by, // Bounded by
+ bounds, // Bounds
+ branch_of, // Branch of
+ british_form_of, // British form of
+ causative_agent_of, // Causative agent of
+ cause_of, // Cause of
+ cdrh_parent_of, // cdrh parent of
+ cell_type_is_associated_with_eo_disease, // cell type is associated with eo disease
+ cell_type_or_tissue_affected_by_chemical_or_drug, // cell type or tissue affected by chemical or drug
+ challenge_of, // Challenge of
+ characterized_by, // Characterized by
+ characterizes, // Characterizes
+ chemical_or_drug_affects_abnormal_cell, // chemical or drug affects abnormal cell
+ chemical_or_drug_affects_cell_type_or_tissue, // chemical or drug affects cell type or tissue
+ chemical_or_drug_affects_gene_product, // chemical or drug affects gene product
+ chemical_or_drug_has_mechanism_of_action, // chemical or drug has mechanism of action
+ chemical_or_drug_has_physiologic_effect, // chemical or drug has physiologic effect
+ chemical_or_drug_initiates_biological_process, // chemical or drug initiates biological process
+ chemical_or_drug_is_metabolized_by_enzyme, // chemical or drug is metabolized by enzyme
+ chemical_or_drug_is_product_of_biological_process, // chemical or drug is product of biological process
+ chemical_or_drug_metabolism_is_associated_with_allele, // chemical or drug metabolism is associated with allele
+ chemical_or_drug_plays_role_in_biological_process, // chemical or drug plays role in biological process
+ chemical_structure_of, // Chemical structure of
+ chemotherapy_regimen_has_component, // chemotherapy regimen has component
+ chromosomal_location_of_allele, // chromosomal location of allele
+ chromosomal_location_of_wild_type_gene( "chromosomal_location_of_wild-type_gene" ), // chromosomal location of wild-type gene
+ chromosome_involved_in_cytogenetic_abnormality, // chromosome involved in cytogenetic abnormality
+ chromosome_mapped_to_disease, // chromosome mapped to disease
+ class_code_classified_by, // Class code classified by
+ class_of, // Class of
+ classified_as, // Classified as
+ classifies_class_code, // Classifies class code
+ classifies, // Classifies
+ clinical_course_of, // Clinical course of
+ clinically_associated_with, // Clinically associated with
+ clinically_similar, // Clinically similar
+ clinician_form_of, // Clinician form of
+ co_occurs_with( "co-occurs_with" ), // Co-ocurrs with
+ common_name_of, // common name of
+ completely_excised_anatomy_has_procedure, // completely excised anatomy has procedure
+ completely_excised_anatomy_may_have_procedure, // Completely excised anatomy may have procedure
+ complex_has_physical_part, // complex has physical part
+ component_of_excluded, // Component of excluded
+ component_of_possibly_included, // Component of possibly included
+ component_of, // Component of
+ concentration_strength_denominator_unit_of, // Concentration strength denominator unit of
+ concentration_strength_denominator_value_of, // Concentration strength denominator value of
+ concentration_strength_numerator_unit_of, // Concentration strength numerator unit of
+ concentration_strength_numerator_value_of, // Concentration strength numerator value of
+ concept_in_subset, // concept in subset
+ conceptual_part_of, // Conceptual part of
+ connected_to, // connected to
+ connection_type_of, // connection type of
+ consider_from, // Consider from
+ consider, // Consider
+ consists_of, // Consists of
+ constitutes, // Constitutes
+ constitutional_part_of, // Constitutional part of
+ consumer_friendly_form_of, // Consumer friendly form of
+ contained_in, // Contained in
+ contains, // Contains
+ context_binding_of, // Context binding of
+ continuation_branch_of, // Continuation branch of
+ continuous_distally_with, // continuous distally with
+ continuous_proximally_with, // continuous proximally with
+ continuous_with, // Continuous with
+ contraindicated_class_of, // Contraindicated class of
+ contraindicated_mechanism_of_action_of, // Contraindicated mechanism of action of
+ contraindicated_physiologic_effect_of, // Contraindicated physiologic effect of
+ contraindicated_with_disease, // Contraindicated with disease
+ contraindicating_class_of, // Contraindicating class of
+ contraindicating_mechanism_of_action_of, // Contraindicating mechanism of action of
+ contraindicating_physiologic_effect_of, // Contraindicating physiologic effect of
+ corresponds_to, // corresponds to
+ count_of_base_of_active_ingredient_of, // Count of base of active ingredient of
+ count_of, // count_of
+ course_of, // Course of
+ ctcae_5_parent_of, // ctcae_5 parent of
+ cytogenetic_abnormality_involves_chromosome, // cytogenetic abnormality involves chromosome
+ data_element_of, // data element of
+ ddx, // dxx
+ default_mapped_from, // Default mapped from
+ default_mapped_to, // Default mapped to
+ defining_characteristic_of, // Defining characteristic of
+ definitional_manifestation_of, // Definitional manifestation of
+ degree_of, // Degree of
+ dependent_of, // Dependent of
+ derives_from, // derives from
+ derives, // derives
+ development_type_of, // development type of
+ developmental_stage_of, // developmental stage of
+ develops_from, // Develops from
+ develops_into, // develops into
+ device_used_by, // Device used by
+ diagnosed_by, // Diagnosed by
+ diagnoses, // Diagnoses
+ diagnostic_criteria_of, // DSM-5 diagnostic criteria for ICD code
+ direct_cell_shape_of, // direct cell shape of
+ direct_device_of, // Direct device of
+ direct_left_of, // direct left of
+ direct_morphology_of, // Direct morphology of
+ direct_procedure_site_of, // Direct procedure site of
+ direct_right_of, // direct right of
+ direct_site_of, // Direct site of
+ direct_substance_of, // Direct substance of
+ disease_excludes_abnormal_cell, // disease excludes abnormal cell
+ disease_excludes_cytogenetic_abnormality, // disease excludes cytogenetic abnormality
+ disease_excludes_finding, // disease excludes finding
+ disease_excludes_molecular_abnormality, // disease excludes molecular abnormality
+ disease_excludes_normal_cell_origin, // disease excludes normal cell origin
+ disease_excludes_normal_tissue_origin, // disease excludes normal tissue origin
+ disease_excludes_primary_anatomic_site, // disease excludes primary anatomic site
+ disease_has_abnormal_cell, // disease has abnormal cell
+ disease_has_accepted_treatment_with_regimen, // Disease Has Accepted Treatment With Regimen
+ disease_has_associated_anatomic_site, // disease has associated anatomic site
+ disease_has_associated_disease, // disease has associated disease
+ disease_has_associated_gene, // disease has associated gene
+ disease_has_cytogenetic_abnormality, // disease has cytogenetic abnormality
+ disease_has_finding, // disease has finding
+ disease_has_metastatic_anatomic_site, // disease has metastatic anatomic site
+ disease_has_molecular_abnormality, // disease has molecular abnormality
+ disease_has_normal_cell_origin, // disease has normal cell origin
+ disease_has_normal_tissue_origin, // disease has normal tissue origin
+ disease_has_primary_anatomic_site, // disease has primary anatomic site
+ disease_is_grade, // disease is grade
+ disease_is_marked_by_gene, // disease is marked by gene
+ disease_is_stage, // disease is stage
+ disease_mapped_to_chromosome, // disease mapped to chromosome
+ disease_mapped_to_gene, // Disease mapped to gene
+ disease_may_have_abnormal_cell, // disease may have abnormal cell
+ disease_may_have_associated_disease, // disease may have associated disease
+ disease_may_have_cytogenetic_abnormality, // disease may have cytogenetic abnormality
+ disease_may_have_finding, // disease may have finding
+ disease_may_have_molecular_abnormality, // disease may have molecular abnormality
+ disease_may_have_normal_cell_origin, // disease may have normal cell origin
+ disposition_of, // Disposition of
+ distal_to, // distal to
+ divisor_of, // Divisor of
+ do_not_code_with, // Do not code with (excludes)
+ dose_form_administration_method_of, // Dose form administration method of
+ dose_form_intended_site_of, // Dose form intended site of
+ dose_form_of, // Dose form of
+ dose_form_release_characteristic_of, // Dose form release characteristic of
+ dose_form_transformation_of, // Dose form transformation of
+ doseformgroup_of, // Dose form group of
+ drains_into, // drains into
+ due_to, // Due to
+ during, // During
+ effect_may_be_inhibited_by, // Effect may be inhibited by
+ efferent_to, // Efferent to
+ endogenous_product_related_to, // Endogenous Product Related To
+ ends_during, // Ends during
+ energy_used_by, // Energy used by
+ entire_anatomy_structure_of, // Entire anatomy structure of
+ entry_combination_of, // Entry Combination of
+ entry_version_of, // Entry version of
+ enzyme_metabolizes_chemical_or_drug, // enzyme metabolizes chemical or drug
+ eo_anatomy_is_associated_with_eo_disease, // eo anatomy is associated with eo disease
+ eo_disease_has_associated_cell_type, // eo disease has associated cell type
+ eo_disease_has_associated_eo_anatomy, // eo disease has associated eo anatomy
+ eo_disease_has_property_or_attribute, // eo disease has property or attribute
+ eo_disease_maps_to_human_disease, // eo disease maps to human disease
+ episodicity_of, // Episodicity of
+ evaluation_of, // Evaluation of
+ excised_anatomy_has_procedure, // excised anatomy has procedure
+ excised_anatomy_may_have_procedure, // excised anatomy may have procedure
+ exhibited_by, // Exhibited by
+ exhibits, // Exhibits
+ expanded_form_of, // Expanded form of
+ expected_outcome_of, // Expected outcome of
+ extent_of, // Extent of
+ external_to, // external to
+ finding_context_of, // Finding context of
+ finding_informer_of, // Finding informer of
+ finding_method_of, // Finding method of
+ finding_site_of, // Finding site of
+ focus_of, // Focus of
+ form_of, // Form of
+ formed_by, // formed by
+ forms, // forms
+ fragments_for_synonyms_of, // Fragments for synonyms of
+ full_grown_phenotype_of, // full grown phenotype of
+ fuses_with, // fuses with
+ fusion_of, // fusion of
+ gene_associated_with_disease, // gene associated with disease
+ gene_encodes_gene_product, // gene encodes gene product
+ gene_found_in_organism, // gene found in organism
+ gene_has_abnormality, // gene has abnormality
+ gene_has_physical_location, // gene has physical location
+ gene_in_chromosomal_location, // gene in chromosomal location
+ gene_involved_in_molecular_abnormality, // gene involved in molecular abnormality
+ gene_involved_in_pathogenesis_of_disease, // gene involved in pathogenesis of disease
+ gene_is_biomarker_of, // gene is biomarker of
+ gene_is_biomarker_type, // gene is biomarker type
+ gene_is_element_in_pathway, // gene is element in pathway
+ gene_mapped_to_disease, // gene mapped to disease
+ gene_mutant_encodes_gene_product_sequence_variation, // gene mutant encodes gene product sequence variation
+ gene_plays_role_in_process, // gene plays role in process
+ gene_product_affected_by_chemical_or_drug, // gene product affected by chemical or drug
+ gene_product_encoded_by_gene, // gene product encoded by gene
+ gene_product_expressed_in_tissue, // gene product expressed in tissue
+ gene_product_has_abnormality, // gene product has abnormality
+ gene_product_has_associated_anatomy, // gene product has associated anatomy
+ gene_product_has_biochemical_function, // gene product has biochemical function
+ gene_product_has_chemical_classification, // gene product has chemical classification
+ gene_product_has_gene_product_variant, // gene product has gene product variant
+ gene_product_has_organism_source, // gene product has organism source
+ gene_product_has_structural_domain_or_motif, // gene product has structural domain or motif
+ gene_product_is_biomarker_of, // gene product is biomarker of
+ gene_product_is_biomarker_type, // gene product is biomarker type
+ gene_product_is_element_in_pathway, // gene product is element in pathway
+ gene_product_is_physical_part_of, // gene product is physical part of
+ gene_product_malfunction_associated_with_disease, // gene product malfunction associated with disease
+ gene_product_plays_role_in_biological_process, // gene product plays role in biological process
+ gene_product_sequence_variation_encoded_by_gene_mutant, // gene product sequence variation encoded by gene mutant
+ gene_product_variant_of_gene_product, // gene product variant of gene product
+ genetic_biomarker_related_to, // genetic biomarker related to
+ germ_origin_of, // Germ origin of
+ grade_of, // grade of
+ happens_during, // Happens during
+ has_access_instrument, // Has access instrument
+ has_access, // Has access
+ has_action_guidance, // Has action guidance
+ has_active_ingredient, // Has active ingredient
+ has_active_metabolites, // Has active metabolites
+ has_active_moiety, // Has Active Moiety
+ has_actual_outcome, // Has actual outcome
+ has_add_on_code, // Has add on code (Report with)
+ has_adherent, // Has adherent
+ has_adjustment, // Has adjustment
+ has_aggregation_view, // Has aggregation view
+ has_alias, // Has alias
+ has_allelic_variant, // Has allelic variant
+ has_alternative, // Has alternative
+ has_answer, // has answer
+ has_approach_guidance, // Has approach guidance
+ has_approach, // Has approach
+ has_arterial_supply, // Has arterial supply
+ has_associated_condition, // has_associated_condition
+ has_associated_etiologic_finding, // Has associated etiologic finding
+ has_associated_finding, // Has associated finding
+ has_associated_function, // Has associated function
+ has_associated_morphology, // Has associated morphology
+ has_associated_procedure, // Has associated procedure
+ has_at_risk_population, // Has at risk population
+ has_basic_dose_form, // Has basic dose form
+ has_basis_of_strength_substance, // Has basis of strength substance
+ has_branch, // Has branch
+ has_british_form, // Has British form
+ has_causative_agent, // Has causative agent
+ has_cdrh_parent, // has cdrh parent
+ has_challenge, // Has challenge
+ has_chemical_structure, // Has chemical structure
+ has_class, // Has class
+ has_clinical_course, // Has clinical course
+ has_clinician_form, // Has clinician form
+ has_common_name, // Has common name
+ has_communication_with_wound, // Has communication with wound
+ has_component, // Has component
+ has_concentration_strength_denominator_unit, // Has concentration strength denominator unit
+ has_concentration_strength_denominator_value, // Has concentration strength denominator value
+ has_concentration_strength_numerator_unit, // Has concentration strength numerator unit
+ has_concentration_strength_numerator_value, // Has concentration strength numerator value
+ has_conceptual_part, // Has conceptual part
+ has_connection_type, // has connection type
+ has_constitutional_part, // Has constitutional part
+ has_consumer_friendly_form, // Has consumer friendly form
+ has_context_binding, // Has context binding
+ has_continuation_branch, // Has continuation branch
+ has_contraindicated_class, // Has contraindicated class
+ has_contraindicated_drug, // Has contraindicated drug
+ has_contraindicated_mechanism_of_action, // Has contraindicated mechanism of action
+ has_contraindicated_physiologic_effect, // Has contraindicated physiologic effect
+ has_contraindicating_class, // Has contraindicating class
+ has_contraindicating_mechanism_of_action, // Has contraindicating mechanism of action
+ has_contraindicating_physiologic_effect, // Has contraindicating physiologic effect
+ has_count_of_base_of_active_ingredient, // Has count of base of active ingredient
+ has_count, // Has count
+ has_course, // Has course
+ has_ctcae_5_parent, // has ctcae_5 parent
+ has_data_element, // has data element
+ has_defining_characteristic, // Has defining characteristic
+ has_definitional_manifestation, // Has definitional manifestation
+ has_degree, // Has degree
+ has_dependent, // Has dependent
+ has_development_type, // has development type
+ has_developmental_stage, // has developmental stage
+ has_diagnostic_criteria, // ICD has DSM-5 diagnostic criteria
+ has_direct_cell_shape, // has direct cell shape
+ has_direct_device, // Has direct device
+ has_direct_morphology, // Has direct morphology
+ has_direct_procedure_site, // Has direct procedure site
+ has_direct_site, // Has direct site
+ has_direct_substance, // Has direct substance
+ has_disposition, // Has disposition
+ has_divisor, // Has divisor
+ has_dose_form_administration_method, // Has dose form administration method
+ has_dose_form_intended_site, // Has dose form intended site
+ has_dose_form_release_characteristic, // Has dose form release characteristic
+ has_dose_form_transformation, // Has dose form transformation
+ has_dose_form, // Has dose form
+ has_doseformgroup, // Has dose form group
+ has_entire_anatomy_structure, // Has entire anatomy structure
+ has_entry_combination, // Has Entry Combination
+ has_entry_version, // Has entry version
+ has_episodicity, // Has episodicity
+ has_evaluation, // Has evaluation
+ has_exam, // Has exam
+ has_excluded_approach, // Has excluded approach
+ has_excluded_associated_finding, // Has excluded associated finding
+ has_excluded_associated_procedure, // Has excluded associated procedure
+ has_excluded_component, // Has excluded component
+ has_excluded_locale, // Has excluded locale
+ has_excluded_method, // Has excluded method
+ has_excluded_pathology, // Has excluded pathology
+ has_excluded_patient_type, // Has excluded patient type
+ has_excluded_procedure_device, // Has excluded procedure device
+ has_excluded_procedure_site, // Has excluded procedure site
+ has_excluded_route_of_administration, // Has excluded route of administration
+ has_excluded_specimen, // Has excluded specimen
+ has_excluded_surgical_extent, // Has excluded surgical extent
+ has_expanded_form, // Has expanded form
+ has_expected_outcome, // Has expected outcome
+ has_extent, // Has extent
+ has_finding_context, // Has finding context
+ has_finding_informer, // Has finding informer
+ has_finding_method, // Has finding method
+ has_finding_site, // Has finding_site
+ has_focus, // Has focus
+ has_form, // Has form
+ has_fragments_for_synonyms, // Has fragments for synonyms
+ has_free_acid_or_base_form, // has free acid or base form
+ has_full_grown_phenotype, // has full grown phenotype
+ has_fusion, // has fusion
+ has_gene_product_element, // has gene product element
+ has_germ_origin, // Has germ origin
+ has_given_pharmaceutical_substance, // Has given pharmaceutical substance
+ has_grade, // has grade
+ has_imaged_location, // Has imaged location
+ has_imaging_focus, // Has imaging focus
+ has_inactive_ingredient, // Has Inactive Ingredient
+ has_indirect_device, // Has indirect device
+ has_indirect_morphology, // Has indirect morphology
+ has_indirect_procedure_site, // Has indirect procedure site
+ has_ingredients, // Has ingredients
+ has_ingredient, // Has ingredient
+ has_inherent_3d_shape, // Has inherent 3-D shape
+ has_inherent_attribute, // Has inherent attribute
+ has_inherent_location, // Has inherent location
+ has_inheritance_type, // Has inheritance type
+ has_insertion, // has insertion
+ has_instrumentation, // Has instrumentation
+ has_intent, // Has intent
+ has_interpretation, // Has interpretation
+ has_lab_number, // Has lab number
+ has_lateral_anatomic_location, // Has lateral anatomic location
+ has_lateral_location_presence, // Has lateral location presence
+ has_laterality, // Has laterality
+ has_life_circumstance, // Has life circumstance
+ has_locale, // Has locale
+ has_location, // Has location
+ has_lymphatic_drainage, // Has lymphatic drainage
+ has_maneuver_type, // has maneuver type
+ has_manifestation, // Has manifestation
+ has_mapping_qualifier, // Has mapping qualifier
+ has_measured_component, // has_measured_component
+ has_measurement_method, // Has measurement method
+ has_mechanism_of_action, // Has mechanism of action
+ has_member, // Has member
+ has_method, // Has method
+ has_modality_subtype, // Has modality subtype
+ has_modality_type, // has modality type
+ has_modification, // Has modification
+ has_multi_level_category, // Has multi-level category
+ has_multipart, // Has multipart
+ has_nerve_supply, // Has nerve supply
+ has_nichd_parent, // has nichd parent
+ has_object_guidance, // Has object guidance
+ has_observed_anatomical_entity, // has observed anatomical entity
+ has_occurrence, // Has occurrence
+ has_onset, // Has onset
+ has_origin, // Has origin
+ has_owning_affiliate, // Has owning affiliate
+ has_owning_section, // Has owning section
+ has_owning_subsection, // Has owning subsection
+ has_panel_element, // CPT laboratory panel code has laboratory panel test member
+ has_parent, // Has parent
+ has_part_anatomy_structure, // Has part anatomy structure
+ has_part, // Has part
+ has_pathological_process, // Has pathological process
+ has_pathology, // Has pathology
+ has_patient_type, // Has patient type
+ has_permuted_term, // Has permuted term
+ has_pharmaceutical_route, // Has_pharmaceutical_route
+ has_pharmacokinetics, // Has pharmacokinetics
+ has_phenotype, // Has phenotype
+ has_physical_part_of_anatomic_structure, // has physical part of anatomic structure
+ has_physiologic_effect, // Has physiologic effect
+ has_physiologic_state, // Has physiologic state
+ has_plain_text_form, // Has plain text form
+ has_possibly_included_approach, // Has possibly included approach
+ has_possibly_included_associated_finding, // Has possibly included associated finding
+ has_possibly_included_associated_procedure, // Has possibly included associated procedure
+ has_possibly_included_component, // Has possibly included component
+ has_possibly_included_method, // Has possibly included method
+ has_possibly_included_panel_element, // CPT laboratory panel code has possibly included laboratory panel test member
+ has_possibly_included_pathology, // Has possibly included pathology
+ has_possibly_included_patient_type, // Has possibly included patient type
+ has_possibly_included_procedure_device, // Has possibly included procedure device
+ has_possibly_included_procedure_site, // Has possibly included procedure site
+ has_possibly_included_route_of_administration, // Has possibly included route of administration
+ has_possibly_included_surgical_extent, // Has possibly included surgical extent
+ has_precise_active_ingredient, // Has precise active ingredient
+ has_precise_ingredient, // Has precise ingredient
+ has_precondition, // Has precondition
+ has_presence_guidance, // Has presence guidance
+ has_presentation_strength_denominator_unit, // Has presentation strength denominator unit
+ has_presentation_strength_denominator_value, // Has presentation strength denominator value
+ has_presentation_strength_numerator_unit, // Has presentation strength numerator unit
+ has_presentation_strength_numerator_value, // Has presentation strength numerator value
+ has_primary_segmental_supply, // Has primary segmental supply
+ has_print_name, // Has print name
+ has_priority, // Has priority
+ has_procedure_context, // Has procedure context
+ has_procedure_device, // Has procedure device
+ has_procedure_morphology, // Has procedure morphology
+ has_procedure_site, // Has procedure site
+ has_process_output, // Has process output
+ has_product_component, // Has product component
+ has_product_monograph_title, // has product monograph title
+ has_projection, // has projection
+ has_property_type, // Has property type
+ has_property, // Has property
+ has_quantified_form, // Has quantified form
+ has_quotient, // Has quotient
+ has_recipient_category, // Has recipient category
+ has_regional_part, // Has regional part
+ has_related_developmental_entity, // has related developmental entity
+ has_related_factor, // Has related factor
+ has_result, // Has result
+ has_revision_status, // Has revision status
+ has_risk_factor, // Has risk factor
+ has_route_of_administration, // Has route of administration
+ has_salt_form, // has salt form
+ has_scale_type, // Has scale type
+ has_scale, // Has scale
+ has_secondary_segmental_supply, // Has secondary segmental supply
+ has_segmental_composition, // Has segmental composition
+ has_segmental_supply, // Has segmental supply
+ has_severity, // Has severity
+ has_sign_or_symptom, // Has sign or symptom
+ has_single_level_category, // Has single level category
+ has_sort_version, // Has sort version
+ has_specialty, // Has specialty
+ has_specimen_procedure, // Has specimen procedure
+ has_specimen_source_identity, // Has specimen source identity
+ has_specimen_source_morphology, // Has specimen source morphology
+ has_specimen_source_topography, // Has specimen source topography
+ has_specimen_substance, // Has specimen substance
+ has_specimen, // Has specimen
+ has_stage, // Has stage
+ has_state_of_matter, // Has state of matter
+ has_structural_class, // Has structural class
+ has_subject_of_information, // Has subject of information
+ has_subject_relationship_context, // Has subject relationship context
+ has_subject, // Has subject
+ has_suffix, // Has suffix
+ has_supersystem, // Has supersystem
+ has_supported_concept_property, // Has supported concept property
+ has_supported_concept_relationship, // Has supported concept relationship
+ has_surgical_approach, // has surgical approach
+ has_surgical_extent, // Has surgical extent
+ has_system, // Has system
+ has_target, // has target
+ has_technique, // Has technique
+ has_temporal_context, // Has temporal context
+ has_therapeutic_class, // Has therapeutic class
+ has_time_aspect, // Has time aspect
+ has_time_modifier, // Has time modifier
+ has_timing_of, // Has timing of
+ has_tradename, // Has tradename
+ has_translation, // Has translation
+ has_transliterated_form, // Has transliterated form
+ has_tributary, // Has tributary
+ has_unit_of_presentation, // Has unit of presentation
+ has_venous_drainage, // Has venous drainage
+ has_version, // Has version
+ has_view_type, // Has view type
+ homonym_for, // Homonym for
+ homonym_of, // Homonym of
+ human_disease_maps_to_eo_disease, // human disease maps to eo disease
+ icd_asterisk, // ICD asterisk
+ icd_dagger, // ICD dagger
+ imaged_anatomy_has_procedure, // imaged anatomy has procedure
+ inactive_ingredient_of, // Inactive Ingredient Of
+ included_in, // included_in
+ includes_sub_specimen, // Includes sub specimen
+ includes, // includes
+ indirect_device_of, // Indirect device of
+ indirect_morphology_of, // Indirect morphology of
+ indirect_procedure_site_of, // Indirect procedure site of
+ induced_by, // Induced by
+ induces, // Induces
+ inferior_to, // inferior to
+ inferolateral_to, // inferolateral to
+ inferomedial_to, // inferomedial to
+ ingredient_of, // Ingredient of
+ ingredients_of, // Ingredients of
+ inherent_3d_shape_of, // Inherent 3-D shape of
+ inherent_location_of, // Inherent location of
+ inheres_in, // Inheres in
+ inheritance_type_of, // Inheritance type of
+ insertion_of, // insertion of
+ instrumentation_of, // Instrumentation of
+ intent_of, // Intent of
+ internal_to, // internal to
+ interpretation_of, // Interpretation of
+ interprets, // Interprets
+ inverse_during, // Inverse during
+ inverse_ends_during, // Inverse ends during
+ inverse_happens_during, // Inverse happens during
+ inverse_isa, // Inverse is a
+ inverse_was_a, // Inverse was a
+ is_abnormal_cell_of_disease, // is abnormal cell of disease
+ is_abnormality_of_gene_product, // is abnormality of gene product
+ is_abnormality_of_gene, // is abnormality of gene
+ is_action_guidance_for, // Is action guidance for
+ is_aggregation_view_of, // Is aggregation view of
+ is_approach_guidance_for, // Is approach guidance for
+ is_associated_anatomic_site_of, // is associated anatomic site of
+ is_associated_anatomy_of_gene_product, // is associated anatomy of gene product
+ is_associated_disease_of, // is associated disease of
+ is_biochemical_function_of_gene_product, // is biochemical function of gene product
+ is_chemical_classification_of_gene_product, // is chemical classification of gene product
+ is_chromosomal_location_of_gene, // is chromosomal location of gene
+ is_component_of_chemotherapy_regimen, // is component of chemotherapy regimen
+ is_cytogenetic_abnormality_of_disease, // is cytogenetic abnormality of disease
+ is_exam_for, // Is exam for
+ is_finding_of_disease, // is finding of disease
+ is_given_pharmaceutical_substance_for, // Is given pharmaceutical substance for
+ is_grade_of_disease, // is grade of disease
+ is_imaged_location_for, // Is imaged location for
+ is_imaging_focus_of, // Is imaging focus of
+ is_interpreted_by, // Is interpreted by
+ is_lateral_anatomic_location_of, // Is lateral anatomic location of
+ is_location_of_anatomic_structure, // is location of anatomic structure
+ is_location_of_biological_process, // is location of biological process
+ is_maneuver_type_for, // Is maneuver type for
+ is_marked_by_gene_product, // is marked by gene product
+ is_mechanism_of_action_of_chemical_or_drug, // is mechanism of action of chemical or drug
+ is_metastatic_anatomic_site_of_disease, // is metastatic anatomic site of disease
+ is_modality_subtype_for, // Is modality subtype for
+ is_modality_type_for, // Is modality type for
+ is_modification_of, // Is modification of
+ is_molecular_abnormality_of_disease, // is molecular abnormality of disease
+ is_normal_cell_origin_of_disease, // is normal cell origin of disease
+ is_normal_tissue_origin_of_disease, // is normal tissue origin of disease
+ is_not_abnormal_cell_of_disease, // is not abnormal cell of disease
+ is_not_cytogenetic_abnormality_of_disease, // is not cytogenetic abnormality of disease
+ is_not_finding_of_disease, // is not finding of disease
+ is_not_molecular_abnormality_of_disease, // is not molecular abnormality of disease
+ is_not_normal_cell_origin_of_disease, // is not normal cell origin of disease
+ is_not_normal_tissue_origin_of_disease, // is not normal tissue origin of disease
+ is_not_primary_anatomic_site_of_disease, // is not primary anatomic site of disease
+ is_object_guidance_for, // Is object guidance for
+ is_organism_source_of_gene_product, // is organism source of gene product
+ is_pharmaceutical_route_for, // Is pharmaceutical route for
+ is_physical_location_of_gene, // is physical location of gene
+ is_physiologic_effect_of_chemical_or_drug, // is physiologic effect of chemical or drug
+ is_presence_guidance_for, // Is presence guidance for
+ is_presence_of_lateral_location, // Is presence of lateral location
+ is_primary_anatomic_site_of_disease, // is primary anatomic site of disease
+ is_property_or_attribute_of_eo_disease, // is property or attribute of eo disease
+ is_qualified_by, // is qualified by
+ is_related_to_endogenous_product, // Is Related To Endogenous Product
+ is_stage_of_disease, // is stage of disease
+ is_structural_domain_or_motif_of_gene_product, // is structural domain or motif of gene product
+ is_subject_of, // Is subject of
+ is_target, // is target
+ is_timing_for, // Is timing for
+ is_view_type_for, // Is view type for
+ isa, // Is a
+ kind_is_domain_of, // kind is domain of
+ kind_is_range_of, // kind is range of
+ lab_number_of, // Lab number
+ larger_than, // Larger Than
+ lateral_to, // lateral to
+ laterality_of, // Laterality of
+ left_lateral_to, // left lateral to
+ left_medial_to, // left medial to
+ life_circumstance_of, // Life circumstance of
+ locale_of_excluded, // Locale of excluded
+ locale_of, // Locale of
+ location_of, // Location of
+ lymphatic_drainage_of, // Lymphatic drainage of
+ manifestation_of, // Manifestation of
+ manufactured_by, // manufactured by
+ manufactures, // manufactures
+ mapped_from, // Mapped from
+ mapped_to, // Mapped to
+ mapping_qualifier_of, // Mapping qualifier of
+ matures_from, // matures from
+ matures_into, // matures into
+ may_be_abnormal_cell_of_disease, // may be abnormal cell of disease
+ may_be_associated_disease_of_disease, // may be associated disease of disease
+ may_be_cytogenetic_abnormality_of_disease, // may be cytogenetic abnormality of disease
+ may_be_diagnosed_by, // May be diagnosed by
+ may_be_finding_of_disease, // may be finding of disease
+ may_be_molecular_abnormality_of_disease, // may be molecular abnormality of disease
+ may_be_normal_cell_origin_of_disease, // may be normal cell origin of disease
+ may_be_prevented_by, // May be prevented by
+ may_be_qualified_by, // May be qualified by
+ may_be_treated_by, // May be treated by
+ may_diagnose, // May diagnose
+ may_inhibit_effect_of, // May inhibit effect of
+ may_prevent, // May prevent
+ may_qualify, // May qualify
+ may_treat, // May treat
+ measured_by, // Measured by
+ measured_component_of, // measured_component_of
+ measurement_method_of, // Measurement method of
+ measures, // Measures
+ mechanism_of_action_of, // Mechanism of action of
+ medial_to, // medial to
+ member_of, // Member of
+ merges_with, // merges with
+ metabolic_site_of, // Metabolic site of
+ method_of_excluded, // Method of excluded
+ method_of_possibly_included, // Method of possibly included
+ method_of, // Method of
+ modified_by, // Modified by
+ modifies, // Modifies
+ molecular_abnormality_involves_gene, // molecular abnormality involves gene
+ moved_from, // Moved from
+ moved_to, // Moved to
+ mth_british_form_of, // MTH British form of
+ mth_expanded_form_of, // MTH expanded form of
+ mth_has_british_form, // MTH has British form
+ mth_has_expanded_form, // MTH has expanded form
+ mth_has_plain_text_form, // Has plain text form, Metathesaurus-asserted
+ mth_has_xml_form, // Has XML form, Metathesaurus-asserted
+ mth_plain_text_form_of, // Plain text form of, Metathesaurus-asserted
+ mth_xml_form_of, // XML form of, Metathesaurus-asserted
+ multipart_of, // Multipart of
+ multiply_mapped_from, // Multiply mapped from
+ multiply_mapped_to, // Multiply mapped to
+ negatively_regulated_by, // Negatively regulated by
+ negatively_regulates, // Negatively regulates
+ neoplasm_has_special_category, // neoplasm has special category
+ nerve_supply_of, // Nerve supply of
+ nichd_parent_of, // nichd parent of
+ noun_form_of, // Noun form of
+ occurs_after, // Occurs after
+ occurs_before, // Occurs before
+ occurs_in, // Occurs in
+ onset_of, // Onset of
+ organism_has_gene, // organism has gene
+ origin_of, // Origin of
+ other_mapped_from, // Other mapped from
+ other_mapped_to, // Other mapped to
+ owning_affiliate_of, // Owning affiliate of
+ owning_section_of, // Owning section of
+ owning_subsection_of, // Owning subsection of
+ panel_element_of_possibly_included, // CPT laboratory panel test member is possibly included element of laboratory code
+ panel_element_of, // CPT laboratory panel test member is element of laboratory code
+ parent_of, // Parent of
+ part_anatomy_structure_of, // Part anatomy structure of
+ part_of, // Part of
+ part_referred_to_by, // Part referred to by
+ partially_excised_anatomy_has_procedure, // partially excised anatomy has procedure
+ partially_excised_anatomy_may_have_procedure, // partially excised anatomy may have procedure
+ pathogenesis_of_disease_involves_gene, // pathogenesis of disease involves gene
+ pathological_process_of, // Pathological process of
+ pathology_of_excluded, // Pathology of excluded
+ pathology_of_possibly_included, // Pathology of possibly included
+ pathology_of, // Pathology of
+ pathway_has_gene_element, // pathway has gene element
+ patient_type_of_excluded, // Patient type of excluded
+ patient_type_of_possibly_included, // Patient type of possibly included
+ patient_type_of, // Patient type of
+ permuted_term_of, // Permuted term of
+ pharmacokinetics_of, // Pharmacokinetics of
+ phenotype_of, // Phenotype of
+ physiologic_effect_of, // Physiologic effect of
+ physiologic_state_of, // Physiologic state of
+ plain_text_form_of, // Plain text form of
+ population_at_risk_for, // Population at risk for
+ positively_regulated_by, // Positively regulated by
+ positively_regulates, // Positively regulates
+ possibly_equivalent_to, // Possibly equivalent to
+ posterior_to, // posterior to
+ posteroinferior_to, // posteroinferior to
+ posterolateral_to, // posterolateral to
+ posteromedial_to, // posteromedial to
+ posterosuperior_to, // posterosuperior to
+ precise_active_ingredient_of, // Precise active ingredient of
+ precise_ingredient_of, // Precise ingredient of
+ precondition_of, // Precondition of
+ presentation_strength_denominator_unit_of, // Presentation strength denominator unit of
+ presentation_strength_denominator_value_of, // Presentation strength denominator value of
+ presentation_strength_numerator_unit_of, // Presentation strength numerator unit of
+ presentation_strength_numerator_value_of, // Presentation strength numerator value of
+ primary_mapped_from, // Primary mapped from
+ primary_mapped_to, // Primary mapped to
+ primary_segmental_supply_of, // Primary segmental supply of
+ print_name_of, // Print name of
+ priority_of, // Priority of
+ procedure_context_of, // Procedure context of
+ procedure_device_of_excluded, // Procedure device of excluded
+ procedure_device_of_possibly_included, // Procedure device of possibly included
+ procedure_device_of, // Procedure device of
+ procedure_has_completely_excised_anatomy, // procedure has completely excised anatomy
+ procedure_has_excised_anatomy, // procedure has excised anatomy
+ procedure_has_imaged_anatomy, // procedure has imaged anatomy
+ procedure_has_partially_excised_anatomy, // procedure has partially excised anatomy
+ procedure_has_target_anatomy, // procedure has target anatomy
+ procedure_may_have_completely_excised_anatomy, // procedure may have completely excised anatomy
+ procedure_may_have_excised_anatomy, // procedure may have excised anatomy
+ procedure_may_have_partially_excised_anatomy, // procedure may have partially excised anatomy
+ procedure_morphology_of, // Procedure morphology of
+ procedure_site_of_excluded, // Procedure site of excluded
+ procedure_site_of_possibly_included, // Procedure site of possibly included
+ procedure_site_of, // Procedure site of
+ process_altered_by_allele, // process altered by allele
+ process_includes_biological_process, // process includes biological process
+ process_initiates_biological_process, // process initiates biological process
+ process_involves_gene, // process involves gene
+ process_output_of, // Process output of
+ product_component_of, // Product component of
+ product_monograph_title_of, // product monograph title of
+ projects_from, // projects from
+ projects_to, // projects to
+ property_of, // Property of
+ property_type_of, // Property type of
+ proximal_to, // proximal to
+ qualifier_applies_to, // qualifier applies to
+ quantified_form_of, // Quantified form of
+ quotient_of, // Quotient of
+ receives_attachment_from, // receives attachment from
+ receives_drainage_from, // receives drainage from
+ receives_input_from, // Receives input from
+ receives_projection, // receives projection
+ recipient_category_of, // Recipient category of
+ referred_to_by, // referred to by
+ refers_to, // refers to
+ reformulated_to, // Reformulated to
+ reformulation_of, // Reformulation of
+ regimen_has_accepted_use_for_disease, // Regimen Has Accepted Use For Disease
+ regional_part_of, // Regional part of
+ regulated_by, // Regulated by
+ regulates, // Regulates
+ related_developmental_entity_of, // related developmental entity of
+ related_factor_of, // Related factor of
+ related_object, // related object
+ related_part, // related part
+ related_to_genetic_biomarker, // related to genetic biomarker
+ related_to, // Is Related to
+ relative_to_part_of, // Relative to part of
+ replaced_by, // Replaced by
+ replaces, // Replaces
+ result_of, // Result of
+ revision_status_of, // Revision status of
+ right_lateral_to, // right lateral to
+ right_medial_to, // right medial to
+ risk_factor_of, // Risk factor of
+ role_has_domain, // role has domain
+ role_has_parent, // role has parent
+ role_has_range, // role has range
+ role_is_parent_of, // role is parent of
+ route_of_administration_of_excluded, // Route of administration of excluded
+ route_of_administration_of_possibly_included, // Route of administration of possibly included
+ route_of_administration_of, // Route of administration of
+ same_as, // Same as
+ scale_of, // Scale of
+ scale_type_of, // Scale type of
+ secondary_segmental_supply_of, // Secondary segmental supply of
+ see_from, // See from
+ see, // See
+ segmental_composition_of, // Segmental composition of
+ segmental_supply_of, // Segmental supply of
+ sends_output_to, // Sends output to
+ severity_of, // Severity of
+ sib_in_branch_of, // Sibling in branch of
+ sib_in_isa, // Sibling in is a
+ sib_in_part_of, // Sibling in part of
+ sib_in_tributary_of, // Sibling in tributary of
+ sign_or_symptom_of, // Sign or symptom of
+ site_of_metabolism, // Site of metabolism
+ smaller_than, // Smaller Than
+ sort_version_of, // Sort version of
+ special_category_includes_neoplasm, // special category includes neoplasm
+ specialty_of, // Specialty of
+ specimen_of_excluded, // Specimen of excluded
+ specimen_of, // Specimen of
+ specimen_procedure_of, // Specimen procedure of
+ specimen_source_identity_of, // Specimen source identity of
+ specimen_source_morphology_of, // Specimen source morphology of
+ specimen_source_topography_of, // specimen source topography of
+ specimen_substance_of, // Specimen substance of
+ ssc, // scc
+ stage_of, // Stage of
+ state_of_matter_of, // State of matter of
+ structural_class_of, // Has structural class
+ sub_specimen_included_by, // Sub specimen included by
+ subject_of_information_of, // Subject of information of
+ subject_relationship_context_of, // Subject relationship context of
+ subset_includes_concept, // subset includes concept
+ substance_used_by_excluded, // Substance used by excluded
+ substance_used_by_possibly_included, // Substance used by possibly included
+ substance_used_by, // Substance used by
+ suffix_of, // Suffix of
+ superior_to, // superior to
+ superolateral_to, // superolateral to
+ superomedial_to, // superomedial to
+ supersystem_of, // Supersystem of
+ supported_concept_property_in, // Supported concept property in
+ supported_concept_relationship_in, // Supported concept relationship in
+ surgical_approach_of, // surgical approach of
+ surgical_extent_of_excluded, // Surgical extent of excluded
+ surgical_extent_of_possibly_included, // Surgical extent of possibly included
+ surgical_extent_of, // Surgical extent of
+ surrounded_by, // Surrounded by
+ surrounds, // Surrounds
+ system_of, // System of
+ target_anatomy_has_procedure, // target anatomy has procedure
+ technique_of, // Technique of
+ temporal_context_of, // Temporal context of
+ temporally_followed_by, // Temporally followed by
+ temporally_follows, // Temporally follows
+ temporally_related_to, // Temporally related to
+ therapeutic_class_of, // Therapeutic class of
+ time_aspect_of, // Time aspect of
+ time_modifier_of, // Time modifier of
+ tissue_is_expression_site_of_gene_product, // tissue is expression site of gene product
+ tradename_of, // Tradename of
+ transforms_from, // transforms from
+ transforms_into, // transforms into
+ translation_of, // Translation of
+ transliterated_form_of, // transliterated_form_of
+ treated_by, // Treated by
+ treats, // Treats
+ tributary_of, // Tributary of
+ uniquely_mapped_from, // Uniquely mapped from
+ uniquely_mapped_to, // Uniquely mapped to
+ unit_of_presentation_of, // Unit of presentation of
+ used_by, // Used by
+ used_for, // Used for
+ uses_access_device, // Uses access device
+ uses_device, // Uses device
+ uses_energy, // Uses energy
+ uses_excluded_substance, // Uses excluded substance
+ uses_possibly_included_substance, // Uses possibly included substance
+ uses_substance, // Uses substance
+ uses, // Uses
+ use, // Use
+ venous_drainage_of, // Venous drainage of
+ version_of, // Version of
+ was_a, // Was a
+ wound_has_communication_with, // Wound has communication with
+ UNKNOWN;
+
+ private final String _name;
+
+ Rela() {
+ this( "" );
+ }
+
+ Rela( String name ) {
+ _name = name;
+ }
+
+ public String getName() {
+ if ( _name.isEmpty() ) {
+ return this.name();
+ }
+ return _name;
+ }
+
+ static public Rela getRela( final String name ) {
+ return Arrays.stream( values() )
+ .filter( s -> name.equalsIgnoreCase( s.getName() ) )
+ .findFirst()
+ .orElse( UNKNOWN );
+ }
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Srl.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Srl.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Srl.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Srl.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,29 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.abbreviation;
+
+/**
+ * https://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/abbreviations.html
+ *
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 12/18/2018
+ */
+public enum Srl {
+ SRL_0( "0" ), // No additional restrictions; general terms of the license agreement apply.
+ SRL_1( "1" ), // General terms + additional restrictions in category 12.1
+ SRL_2( "2" ), // General terms + additional restrictions in category 12.2
+ SRL_3( "3" ), // General terms + additional restrictions in category 12.3
+ SRL_4( "4" ), // General terms + additional restrictions in category 12.4
+ SRL_9( "9" ); // General terms + SNOMED CT Affiliate License in Appendix 2
+
+ private final String _name;
+
+ Srl( String name ) {
+ _name = name;
+ }
+
+ public String getName() {
+ return _name;
+ }
+
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stt.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stt.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stt.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stt.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,17 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.abbreviation;
+
+/**
+ * String type
+ * https://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/abbreviations.html
+ *
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 12/18/2018
+ */
+public enum Stt {
+ PF, // Preferred form of term
+ VCW, // Case and word-order variant of the preferred form
+ VC, // Case variant of the preferred form
+ VO, // Variant of the preferred form
+ VW; // Word-order variant of the preferred form
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stype.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stype.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stype.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Stype.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,18 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.abbreviation;
+
+/**
+ * Column name in MRCONSO.RRF with identifier to which relationship is attached
+ * https://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/abbreviations.html
+ *
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 12/18/2018
+ */
+public enum Stype {
+ AUI, //Atom identifier
+ CODE, //Unique Identifier or code for string in source
+ CUI, //Concept unique identifier
+ SCUI, //Source asserted concept unique identifier
+ SDUI; //Source asserted descriptor identifier
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Ts.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Ts.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Ts.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/abbreviation/Ts.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,16 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.abbreviation;
+
+/**
+ * Term Status
+ * https://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/abbreviations.html
+ *
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 12/18/2018
+ */
+public enum Ts {
+ P, // Preferred LUI of the CUI
+ S; // Non-Preferred LUI of the CUI
+// p, // Preferred LUI of the CUI, suppressible (only used in ORF MRCON)
+// s; // Non-Preferred LUI of the CUI, suppressible (only used in ORF MRCON)
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrConso.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrConso.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrConso.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrConso.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,32 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.file;
+
+
+/**
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 11/29/2018
+ * <p>
+ * Concept names and sources in the MRCONSO.RRF
+ */
+public enum MrConso {
+ CUI, // Unique identifier for concept
+ LAT, // Language of Term(s)
+ TS, // Term status
+ LUI, // Unique identifier for term
+ STT, // String type
+ SUI, // Unique identifier for string
+ ISPREF, // Indicates whether AUI is preferred --- oddly enough, N sometimes means Yes ...
+ AUI, // Unique identifier for atom
+ SAUI, // Source asserted atom identifier
+ SCUI, // Source asserted concept identifier
+ SDUI, // Source asserted descriptor identifier
+ SAB, // Source abbreviation
+ TTY, // Term type in source
+ CODE, // Unique Identifier or code for string in source
+ STR, // String
+ SRL, // Source Restriction Level
+ SUPPRESS,// Suppressible flag It looks like "O" means suppressible, "N" means not.
+ CVF; // Content view flag
+
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrRel.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrRel.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrRel.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrRel.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,30 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.file;
+
+
+/**
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 11/29/2018
+ * <p>
+ * Related Concepts in MRREL.RRF
+ */
+public enum MrRel {
+ CUI1, // Unique identifier for first concept
+ AUI1, // Unique identifier for first atom
+ STYPE1, // The name of the column in MRCONSO.RRF that contains the first identifier to which the relationship is attached
+ REL, // Relationship label
+ CUI2, // Unique identifier for second concept
+ AUI2, // Unique identifier for second atom
+ STYPE2, // The name of the column in MRCONSO.RRF that contains the second identifier to which the relationship is attached
+ RELA, // Additional relationship label --- e.g. parent_of
+ RUI, // Unique identifier for relationship
+ SRUI, // Source attributed relationship identifier
+ SAB, // Source abbreviation --- e.g. NCI
+ SL, // Source of relationship labels --- e.g. NCI
+ RG, // Relationship group
+ DIR, // Source asserted directionality flag
+ SUPPRESS,// Suppressible flag
+ CVF; // Content view flag
+
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSat.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSat.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSat.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSat.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,27 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.file;
+
+
+/**
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 11/29/2018
+ * <p>
+ * Simple Concept, Term and String Attributes in MRSAT.RRF
+ */
+public enum MrSat {
+ CUI, // Unique identifier for concept
+ LUI, // Unique identifier for term
+ SUI, // Unique identifier for string
+ METAUI, // Metathesaurus asserted unique identifier
+ STYPE, // The name of the column in MRCONSO.RRF or MRREL.RRF that contains the identifier to which the attribute is attached
+ CODE, // Unique Identifier or code for string in source
+ ATUI, // Unique identifier for attribute
+ SATUI, // Source asserted attribute identifier
+ ATN, // Attribute name
+ SAB, // Source abbreviation
+ ATV, // Attribute value
+ SUPPRESS,// Suppressible flag
+ CVF; // Content view flag
+
+
+}
Added: ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSty.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSty.java?rev=1881995&view=auto
==============================================================================
--- ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSty.java (added)
+++ ctakes/trunk/ctakes-gui/src/main/java/org/apache/ctakes/gui/dictionary/cased/umls/file/MrSty.java Fri Sep 25 01:04:47 2020
@@ -0,0 +1,18 @@
+package org.apache.ctakes.gui.dictionary.cased.umls.file;
+
+/**
+ * @author SPF , chip-nlp
+ * @version %I%
+ * @since 11/29/2018
+ * <p>
+ * Semantic Types in MRSTY.RRF
+ */
+public enum MrSty {
+ CUI, // Unique identifier for concept
+ TUI, // Unique identifier of Semantic type
+ STN, // Semantic type tree number
+ STY, // Semantic type
+ ATUI, // Unique identifier for attribute
+ CVF; // Content view flag
+
+}