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Posted to reviews@spark.apache.org by yhuai <gi...@git.apache.org> on 2015/12/03 06:17:10 UTC
[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
GitHub user yhuai opened a pull request:
https://github.com/apache/spark/pull/10120
[SQL] [DO NOT MERGE] Try to log some useful things to catch the cause of SPARK-12089.
This PR adds logs in different place and hopefully we can catch the cause of https://issues.apache.org/jira/browse/SPARK-12089.
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/yhuai/spark SPARK-12089-log
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/10120.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #10120
----
commit 5d23a6a77d0b5c1259190c1d27f4138ba1a4938d
Author: Yin Huai <yh...@databricks.com>
Date: 2015-12-03T05:00:09Z
Try to log some useful things.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161547818
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161736788
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by nongli <gi...@git.apache.org>.
Github user nongli commented on a diff in the pull request:
https://github.com/apache/spark/pull/10120#discussion_r46518529
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -42,7 +47,18 @@ public void grow(int neededSize, UnsafeRow row) {
final int length = totalSize() + neededSize;
if (buffer.length < length) {
// This will not happen frequently, because the buffer is re-used.
- final byte[] tmp = new byte[length * 2];
+ final byte[] tmp;
+ try {
+ tmp = new byte[length * 2];
+ } catch (NegativeArraySizeException e) {
+ String errorMessage =
+ "NegativeArraySizeException is triggered. The current length is " + buffer.length +
+ ". The new length is " + length + " * 2. totalSize is " + totalSize() +
--- End diff --
Might be helpful to catch the exception here/move current logging to
https://github.com/apache/spark/blob/master/sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/UnsafeRowWriter.java#L196
and log some more stuff and the entire row. Is the whole thing corrupt?
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161792293
**[Test build #47160 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47160/consoleFull)** for PR 10120 at commit [`e842a49`](https://github.com/apache/spark/commit/e842a49090711c1efb34bd040625da66358c9f31).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds the following public classes _(experimental)_:\n * `class CrossValidator @Since(\"1.2.0\") (@Since(\"1.4.0\") override val uid: String)`\n * `class ParamGridBuilder @Since(\"1.2.0\") `\n * `class TrainValidationSplit @Since(\"1.5.0\") (@Since(\"1.5.0\") override val uid: String)`\n
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161736547
**[Test build #47145 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47145/consoleFull)** for PR 10120 at commit [`85a2cfd`](https://github.com/apache/spark/commit/85a2cfdfaab608d723a757316cbf74d615d8381c).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by yhuai <gi...@git.apache.org>.
Github user yhuai closed the pull request at:
https://github.com/apache/spark/pull/10120
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by nongli <gi...@git.apache.org>.
Github user nongli commented on a diff in the pull request:
https://github.com/apache/spark/pull/10120#discussion_r46515840
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/UnsafeRow.java ---
@@ -445,7 +450,13 @@ public UTF8String getUTF8String(int ordinal) {
final long offsetAndSize = getLong(ordinal);
final int offset = (int) (offsetAndSize >> 32);
final int size = (int) offsetAndSize;
- return UTF8String.fromAddress(baseObject, baseOffset + offset, size);
+ final UTF8String str = UTF8String.fromAddress(baseObject, baseOffset + offset, size);
--- End diff --
also check size >= 0
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161765176
**[Test build #47160 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47160/consoleFull)** for PR 10120 at commit [`e842a49`](https://github.com/apache/spark/commit/e842a49090711c1efb34bd040625da66358c9f31).
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by nongli <gi...@git.apache.org>.
Github user nongli commented on a diff in the pull request:
https://github.com/apache/spark/pull/10120#discussion_r46518443
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -42,7 +47,18 @@ public void grow(int neededSize, UnsafeRow row) {
final int length = totalSize() + neededSize;
if (buffer.length < length) {
// This will not happen frequently, because the buffer is re-used.
- final byte[] tmp = new byte[length * 2];
+ final byte[] tmp;
+ try {
+ tmp = new byte[length * 2];
+ } catch (NegativeArraySizeException e) {
+ String errorMessage =
+ "NegativeArraySizeException is triggered. The current length is " + buffer.length +
+ ". The new length is " + length + " * 2. totalSize is " + totalSize() +
--- End diff --
Sorry read that too fast.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161792646
Merged build finished. Test PASSed.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161792647
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by nongli <gi...@git.apache.org>.
Github user nongli commented on a diff in the pull request:
https://github.com/apache/spark/pull/10120#discussion_r46515884
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -42,7 +47,18 @@ public void grow(int neededSize, UnsafeRow row) {
final int length = totalSize() + neededSize;
if (buffer.length < length) {
// This will not happen frequently, because the buffer is re-used.
- final byte[] tmp = new byte[length * 2];
+ final byte[] tmp;
+ try {
+ tmp = new byte[length * 2];
+ } catch (NegativeArraySizeException e) {
+ String errorMessage =
+ "NegativeArraySizeException is triggered. The current length is " + buffer.length +
+ ". The new length is " + length + " * 2. totalSize is " + totalSize() +
--- End diff --
* 2 is inside quotes. Probably not what you meant.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161537147
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161547681
**[Test build #47120 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47120/consoleFull)** for PR 10120 at commit [`c8fc2ec`](https://github.com/apache/spark/commit/c8fc2ec5aea720c6f3b3553f9efa99bc5b545d70).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by yhuai <gi...@git.apache.org>.
Github user yhuai commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161888402
i am closing it.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161547817
Merged build finished. Test PASSed.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161537070
**[Test build #47117 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47117/consoleFull)** for PR 10120 at commit [`5d23a6a`](https://github.com/apache/spark/commit/5d23a6a77d0b5c1259190c1d27f4138ba1a4938d).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by yhuai <gi...@git.apache.org>.
Github user yhuai commented on a diff in the pull request:
https://github.com/apache/spark/pull/10120#discussion_r46584803
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -42,7 +47,18 @@ public void grow(int neededSize, UnsafeRow row) {
final int length = totalSize() + neededSize;
if (buffer.length < length) {
// This will not happen frequently, because the buffer is re-used.
- final byte[] tmp = new byte[length * 2];
+ final byte[] tmp;
+ try {
+ tmp = new byte[length * 2];
+ } catch (NegativeArraySizeException e) {
+ String errorMessage =
+ "NegativeArraySizeException is triggered. The current length is " + buffer.length +
+ ". The new length is " + length + " * 2. totalSize is " + totalSize() +
--- End diff --
Done. https://github.com/apache/spark/pull/10120/files#diff-c654dda59109239bce5498cbc30ab251L196 will dump the unsafe row. https://github.com/apache/spark/pull/10120/files#diff-244a70a91841bbddf6fae17c14c18ce4L378 will dump the row that is human readable.
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161521319
**[Test build #47117 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47117/consoleFull)** for PR 10120 at commit [`5d23a6a`](https://github.com/apache/spark/commit/5d23a6a77d0b5c1259190c1d27f4138ba1a4938d).
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161708797
**[Test build #47145 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47145/consoleFull)** for PR 10120 at commit [`85a2cfd`](https://github.com/apache/spark/commit/85a2cfdfaab608d723a757316cbf74d615d8381c).
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161532033
**[Test build #47120 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/47120/consoleFull)** for PR 10120 at commit [`c8fc2ec`](https://github.com/apache/spark/commit/c8fc2ec5aea720c6f3b3553f9efa99bc5b545d70).
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[GitHub] spark pull request: [SQL] [DO NOT MERGE] Try to log some useful th...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/10120#issuecomment-161736792
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https://github.com/apache/spark/pull/10120#issuecomment-161537145
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