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Posted to dev@ctakes.apache.org by Ks Sunder <sh...@gmail.com> on 2017/01/10 11:39:36 UTC
Please provide a solution for this issue...
Hi All,
I am creating RestAPI using cTakes,
POM.XML Information........
---------------------------------------------------------------------------------------
<?xml version="1.0" encoding="UTF-8"?>
<!-- <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="
http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd"> -->
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="
http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="
http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.sample.webproject</groupId>
<artifactId>SampleWebApp</artifactId>
<packaging>war</packaging>
<version>1.0-SNAPSHOT</version>
<name>SampleWebApp Maven Webapp</name>
<!-- <url>http://maven.apache.org</url> -->
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>3.8.1</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>3.0.1</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-type-system</artifactId>
<version>3.2.2</version><!--$NO-MVN-MAN-VER$-->
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-assertion-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-dictionary-lookup</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-core</artifactId>
<version>3.2.0</version>
</dependency>
<dependency>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-core</artifactId>
<version>4.0.0</version>
</dependency>
<dependency>
<groupId>tw.edu.ntu.csie</groupId>
<artifactId>libsvm</artifactId>
<version>3.1</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-context</artifactId>
<version>3.1.2.RELEASE</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-core</artifactId>
<version>3.1.2.RELEASE</version>
</dependency>
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-library</artifactId>
<version>2.9.0</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.scala-tools.sbinary</groupId>
<artifactId>sbinary_2.9.0</artifactId>
<version>0.4.0</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-lvg</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-context-tokenizer</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-chunker</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-relation-extractor</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-ml-liblinear</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-assertion-zoner-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>net.sf.mastif</groupId>
<artifactId>mastif-zoner</artifactId>
<version>1.4</version>
</dependency>
<dependency>
<groupId>org.apache.uima</groupId>
<artifactId>uimaj-core</artifactId>
<version>2.4.0</version>
</dependency>
<dependency>
<groupId>org.apache.uima</groupId>
<artifactId>uimafit-core</artifactId>
<version>2.1.0</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-preprocessor</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-ne-contexts</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-drug-ner</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-assertion</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-ytex</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-ytex-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-ytex-uima</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-dictionary-lookup-fast</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-constituency-parser-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-core-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.jdom</groupId>
<artifactId>jdom2</artifactId>
<version>2.0.3</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-util</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>edu.mit.findstruct</groupId>
<artifactId>findstructapi</artifactId>
<version>0.0.1</version>
</dependency>
<dependency>
<groupId>com.googlecode.armbrust-file-utils</groupId>
<artifactId>sqlwrapper</artifactId>
<version>0.0.1</version>
</dependency>
<dependency>
<groupId>net.sourceforge.openai</groupId>
<artifactId>openaifsm</artifactId>
<version>0.0.1</version>
</dependency>
<dependency>
<groupId>org.apache.uima</groupId>
<artifactId>uimaj-examples</artifactId>
<version>2.4.0</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-coreference-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>com.googlecode.clearnlp</groupId>
<artifactId>clearnlp</artifactId>
<version>1.3.1</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-dictionary-lookup-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>hsqldb</groupId>
<artifactId>hsqldb</artifactId>
<version>1.8.0.10</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-dictionary-lookup-fast-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>net.sourceforge.ctakesresources</groupId>
<artifactId>
ctakes-resources-snomed-rword-hsqldb-2011ab
</artifactId>
<version>3.2.1.1</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-clinical-pipeline</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-coreference</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-side-effect</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-smoking-status</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-temporal</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-lvg-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>gov.nih.nlm.nls.lvg</groupId>
<artifactId>lvg2010dist</artifactId>
<version>0.0.1</version>
</dependency>
<dependency>
<groupId>net.sourceforge.ctakesresources</groupId>
<artifactId>ctakes-resources-lvg2008</artifactId>
<version>3.2.1.1</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-ne-contexts-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-pos-tagger-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>xerces</groupId>
<artifactId>xercesImpl</artifactId>
<version>2.10.0</version>
</dependency>
<dependency>
<groupId>xmlunit</groupId>
<artifactId>xmlunit</artifactId>
<version>1.4</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes-temporal-res</artifactId>
<version>3.2.2</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-timeml</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-ml-svmlight</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-ml-tksvmlight</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-type-system</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>org.cleartk</groupId>
<artifactId>cleartk-ml-crfsuite</artifactId>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>info.bethard</groupId>
<artifactId>timenorm</artifactId>
<version>0.9.0</version>
</dependency>
<dependency>
<groupId>com.googlecode.java-diff-utils</groupId>
<artifactId>diffutils</artifactId>
<version>1.3.0</version>
</dependency>
<dependency>
<groupId>org.apache.uima</groupId>
<artifactId>uimaj-tools</artifactId>
<version>2.6.0</version>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>4.2.6.Final</version>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-ehcache</artifactId>
<version>4.2.6.Final</version>
</dependency>
<dependency>
<groupId>nz.ac.waikato.cms.weka</groupId>
<artifactId>weka-stable</artifactId>
<version>3.6.10</version>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<version>5.1.26</version>
</dependency>
<dependency>
<groupId>antlr</groupId>
<artifactId>antlr</artifactId>
<version>2.7.7</version>
</dependency>
<dependency>
<groupId>org.javassist</groupId>
<artifactId>javassist</artifactId>
<version>3.15.0-GA</version>
</dependency>
<dependency>
<groupId>ant-contrib</groupId>
<artifactId>ant-contrib</artifactId>
<version>1.0b3</version>
</dependency>
<dependency>
<groupId>commons-jxpath</groupId>
<artifactId>commons-jxpath</artifactId>
<version>1.3</version>
</dependency>
<dependency>
<groupId>commons-beanutils</groupId>
<artifactId>commons-beanutils</artifactId>
<version>1.8.3</version>
</dependency>
<dependency>
<groupId>commons-dbcp</groupId>
<artifactId>commons-dbcp</artifactId>
<version>1.4</version>
</dependency>
<dependency>
<groupId>org.apache.solr</groupId>
<artifactId>solr-commons-csv</artifactId>
<version>3.5.0</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jdbc</artifactId>
<version>3.1.2.RELEASE</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-orm</artifactId>
<version>3.1.2.RELEASE</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-aop</artifactId>
<version>3.1.2.RELEASE</version>
</dependency>
<dependency>
<groupId>org.aspectj</groupId>
<artifactId>aspectjweaver</artifactId>
<version>1.7.3</version>
</dependency>
<dependency>
<groupId>net.sf.ehcache</groupId>
<artifactId>ehcache-core</artifactId>
<version>2.4.6</version>
</dependency>
<dependency>
<groupId>com.rubiconproject.oss</groupId>
<artifactId>jchronic</artifactId>
<version>0.2.6</version>
</dependency>
<dependency>
<groupId>javax.xml.bind</groupId>
<artifactId>jaxb-api</artifactId>
<version>2.2.5</version>
</dependency>
<dependency>
<groupId>com.sun.xml.bind</groupId>
<artifactId>jaxb-impl</artifactId>
<version>2.2.5</version>
</dependency>
<dependency>
<groupId>org.apache.ant</groupId>
<artifactId>ant-launcher</artifactId>
<version>1.9.2</version>
</dependency>
<dependency>
<groupId>org.apache.ant</groupId>
<artifactId>ant</artifactId>
<version>1.9.2</version>
</dependency>
<dependency>
<groupId>commons-collections</groupId>
<artifactId>commons-collections</artifactId>
<version>3.0</version>
</dependency>
<dependency>
<groupId>cglib</groupId>
<artifactId>cglib</artifactId>
<version>2.2.2</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-server</artifactId>
<version>1.17.1</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-servlet</artifactId>
<version>1.17.1</version>
</dependency>
<dependency>
<groupId>org.apache.tomcat</groupId>
<artifactId>servlet-api</artifactId>
<version>6.0.44</version>
</dependency>
<dependency>
<groupId>asm</groupId>
<artifactId>asm</artifactId>
<version>3.3.1</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-bundle</artifactId>
<version>1.19</version>
</dependency>
<dependency>
<groupId>org.json</groupId>
<artifactId>json</artifactId>
<version>20140107</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-core</artifactId>
<version>1.17.1</version>
</dependency>
<dependency>
<groupId>com.yammer.metrics</groupId>
<artifactId>metrics-servlet</artifactId>
<version>2.1.2</version>
<exclusions>
<exclusion>
<groupId>org.codehaus.jackson</groupId>
<artifactId>jackson-mapper-asl</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>au.com.bytecode</groupId>
<artifactId>opencsv</artifactId>
<version>2.4</version>
</dependency>
</dependencies>
<build>
<finalName>SampleWebApp</finalName>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
</plugins>
</build>
</project>
......
In Service I am using this method..
-----------------------------------------------------------------------------------------------
public AnalysisEngineDescription getUMLPipeline() throws
ResourceInitializationException, URISyntaxException{
AggregateBuilder builder = new AggregateBuilder();
builder.add(SimpleSegmentAnnotator.createAnnotatorDescription());
builder.add(SentenceDetector.createAnnotatorDescription());
builder.add(TokenizerAnnotatorPTB.createAnnotatorDescription());
builder.add(POSTagger.createAnnotatorDescription());
builder.add(ClinicalPipelineFactory.getNpChunkerPipeline());
builder.add(LvgAnnotator.createAnnotatorDescription());
try {
builder.add( AnalysisEngineFactory.createEngineDescription(
DefaultJCasTermAnnotator.class,
AbstractJCasTermAnnotator.PARAM_WINDOW_ANNOT_PRP,
"org.apache.ctakes.typesystem.type.textspan.Sentence",
JCasTermAnnotator.DICTIONARY_DESCRIPTOR_KEY,
ExternalResourceFactory.createExternalResourceDescription(
FileResourceImpl.class,
FileLocator.locateFile(
"org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml" )
)
) );
} catch ( FileNotFoundException e ) {
e.printStackTrace();
throw new ResourceInitializationException( e );
}
return builder.createAggregateDescription();
}
....
when run the application through URL...
I am getting this exception...
log4j: Adding appender named [consoleAppender] to category [root].
java.io.FileNotFoundException:
org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
at
org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:93)
at
org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:68)
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:134)
at service.ExelReadJava.getmainMethod(ExelReadJava.java:75)
at restApp.HelloResource.cTakesMethod(HelloResource.java:88)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.VoidVoidDispatchProvider$VoidVoidMethodInvoker._dispatch(VoidVoidDispatchProvider.java:71)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:218)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:958)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:452)
at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1087)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at
org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
org.apache.uima.resource.ResourceInitializationException
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:139)
at service.ExelReadJava.getmainMethod(ExelReadJava.java:75)
at restApp.HelloResource.cTakesMethod(HelloResource.java:88)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.VoidVoidDispatchProvider$VoidVoidMethodInvoker._dispatch(VoidVoidDispatchProvider.java:71)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:218)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:958)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:452)
at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1087)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at
org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.FileNotFoundException:
org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
at
org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:93)
at
org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:68)
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:134)
... 42 more
Line # 2
java.io.FileNotFoundException:
org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
at
org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:93)
at
org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:68)
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:134)
at service.ExelReadJava.getmainMethod(ExelReadJava.java:75)
at restApp.HelloResource.cTakesMethod(HelloResource.java:88)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.VoidVoidDispatchProvider$VoidVoidMethodInvoker._dispatch(VoidVoidDispatchProvider.java:71)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:218)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:958)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:452)
at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1087)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at
org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
org.apache.uima.resource.ResourceInitializationException
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:139)
at service.ExelReadJava.getmainMethod(ExelReadJava.java:75)
at restApp.HelloResource.cTakesMethod(HelloResource.java:88)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.VoidVoidDispatchProvider$VoidVoidMethodInvoker._dispatch(VoidVoidDispatchProvider.java:71)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:218)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:958)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:452)
at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1087)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at
org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.FileNotFoundException:
org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
at
org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:93)
at
org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:68)
at service.PipelineTesting.getUMLPipeline(PipelineTesting.java:134)
... 42 more
----------------------------------------------------------------------------------------------------
.....please give me a solution for this...
regards,
shyam k.