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Posted to dev@joshua.apache.org by "Lewis John McGibbney (JIRA)" <ji...@apache.org> on 2016/09/21 21:47:20 UTC
[jira] [Created] (JOSHUA-312) Alignment is never cached
Lewis John McGibbney created JOSHUA-312:
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Summary: Alignment is never cached
Key: JOSHUA-312
URL: https://issues.apache.org/jira/browse/JOSHUA-312
Project: Joshua
Issue Type: Improvement
Components: alignment
Affects Versions: 6.0.5
Reporter: Lewis John McGibbney
Priority: Critical
Fix For: 6.2
Say if a pipeline fails after alignment. The alignment result is never cached and it becomes necessary to undertake alignment... again!
We should investigate the process for caching alignments as it would really speed up rerunning end-to-end pipelines for large input datasets.
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