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Posted to commits@lucene.apache.org by jp...@apache.org on 2016/01/12 11:25:19 UTC
svn commit: r1724196 - in /lucene/dev/branches/lucene_solr_5_4: ./ solr/
solr/CHANGES.txt solr/core/
solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java solr/solrj/
solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java
Author: jpountz
Date: Tue Jan 12 10:25:19 2016
New Revision: 1724196
URL: http://svn.apache.org/viewvc?rev=1724196&view=rev
Log:
SOLR-7462: AIOOBE in RecordingJSONParser
Modified:
lucene/dev/branches/lucene_solr_5_4/ (props changed)
lucene/dev/branches/lucene_solr_5_4/solr/ (props changed)
lucene/dev/branches/lucene_solr_5_4/solr/CHANGES.txt (contents, props changed)
lucene/dev/branches/lucene_solr_5_4/solr/core/ (props changed)
lucene/dev/branches/lucene_solr_5_4/solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java
lucene/dev/branches/lucene_solr_5_4/solr/solrj/ (props changed)
lucene/dev/branches/lucene_solr_5_4/solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java
Modified: lucene/dev/branches/lucene_solr_5_4/solr/CHANGES.txt
URL: http://svn.apache.org/viewvc/lucene/dev/branches/lucene_solr_5_4/solr/CHANGES.txt?rev=1724196&r1=1724195&r2=1724196&view=diff
==============================================================================
--- lucene/dev/branches/lucene_solr_5_4/solr/CHANGES.txt (original)
+++ lucene/dev/branches/lucene_solr_5_4/solr/CHANGES.txt Tue Jan 12 10:25:19 2016
@@ -486,6 +486,9 @@ Bug Fixes
* SOLR-8422: When authentication enabled, requests fail if sent to a node that doesn't host
the collection (noble)
+* SOLR-7462: AIOOBE in RecordingJSONParser (Scott Dawson, noble)
+
+
================== 5.3.1 ==================
Bug Fixes
Modified: lucene/dev/branches/lucene_solr_5_4/solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java
URL: http://svn.apache.org/viewvc/lucene/dev/branches/lucene_solr_5_4/solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java?rev=1724196&r1=1724195&r2=1724196&view=diff
==============================================================================
--- lucene/dev/branches/lucene_solr_5_4/solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java (original)
+++ lucene/dev/branches/lucene_solr_5_4/solr/core/src/java/org/apache/solr/util/RecordingJSONParser.java Tue Jan 12 10:25:19 2016
@@ -57,7 +57,7 @@ public class RecordingJSONParser extends
position = getPosition();
// if reading a String , the getStringChars do not return the closing single quote or double quote
//so, try to capture that
- if(chars.getArray().length >=chars.getStart()+chars.size()) {
+ if(chars.getArray().length >chars.getStart()+chars.size()) {
char next = chars.getArray()[chars.getStart() + chars.size()];
if(next =='"' || next == '\'') {
recordChar(next);
@@ -76,4 +76,8 @@ public class RecordingJSONParser extends
if(sb != null) return sb.toString();
return null;
}
+
+ public JSONParser.ParseException error(String msg) {
+ return err(msg);
+ }
}
Modified: lucene/dev/branches/lucene_solr_5_4/solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java
URL: http://svn.apache.org/viewvc/lucene/dev/branches/lucene_solr_5_4/solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java?rev=1724196&r1=1724195&r2=1724196&view=diff
==============================================================================
--- lucene/dev/branches/lucene_solr_5_4/solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java (original)
+++ lucene/dev/branches/lucene_solr_5_4/solr/solrj/src/test/org/apache/solr/common/util/TestJsonRecordReader.java Tue Jan 12 10:25:19 2016
@@ -18,6 +18,7 @@ package org.apache.solr.common.util;
*/
import org.apache.solr.SolrTestCaseJ4;
+import org.apache.solr.util.RecordingJSONParser;
import java.io.IOException;
import java.io.StringReader;
@@ -254,4 +255,358 @@ public class TestJsonRecordReader extend
}
}
}
+
+ public void testAIOOBE() throws IOException {
+ String json = "[ {\n" +
+ " \"taxon_group\" : {\n" +
+ " \"identifiers\" : {\n" +
+ " \"bioentry_id\" : 1876284,\n" +
+ " \"namespace\" : \"NCBI\",\n" +
+ " \"primary_id\" : \"AAAAA_ID_19303\",\n" +
+ " \"version\" : null,\n" +
+ " \"name\" : \"AAAAA_ID_19303\",\n" +
+ " \"description\" : \"Taxon group for NCBI taxon 1286265\",\n" +
+ " \"accession\" : \"AAAAA_ID_19303\"\n" +
+ " },\n" +
+ " \"source\" : [\n" +
+ " {\n" +
+ " \"ID\" : \"AAAAA_ID_19303_0\",\n" +
+ " \"segment_group_serotype\" : \"H3\",\n" +
+ " \"primary_key\" : 11877892,\n" +
+ " \"name\" : \"segment_group\",\n" +
+ " \"segment_group_NA_subtype\" : \"\",\n" +
+ " \"segmentgroup_sequence_count\" : \"1\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"segment_group_submitter_lab\" : \"Microbiology, Faculty of Medicine Sebelas Maret University, Jl. Ir. Sutami 36A, Surakarta, Jawa Tengah 57126, Indonesia\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"segment_group_submission_date\" : \"22-JAN-2013\",\n" +
+ " \"segment_group_HA_subtype\" : \"H3\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"taxon_group_serotype\" : \"H3\",\n" +
+ " \"taxon_group_sequence_count\" : \"1\",\n" +
+ " \"ID\" : \"AAAAA_ID_19303\",\n" +
+ " \"primary_key\" : 11877893,\n" +
+ " \"name\" : \"source\",\n" +
+ " \"db_xref\" : [\n" +
+ " \"taxon:1286265\"\n" +
+ " ],\n" +
+ " \"taxon_group_HA_subtype\" : \"H3\",\n" +
+ " \"taxon_group_segment_group_count\" : \"1\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"taxon_group_NA_subtype\" : \"\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " }\n" +
+ " ],\n" +
+ " \"segment_groups\" : [\n" +
+ " {\n" +
+ " \"identifiers\" : {\n" +
+ " \"bioentry_id\" : 1876283,\n" +
+ " \"namespace\" : \"NCBI\",\n" +
+ " \"primary_id\" : \"AAAAA_ID_19303_0\",\n" +
+ " \"version\" : null,\n" +
+ " \"name\" : \"AAAAA_ID_19303_0\",\n" +
+ " \"description\" : \"Segment group 0 for AAAAA_ID_19303 (NCBI taxon 1286265)\",\n" +
+ " \"accession\" : \"AAAAA_ID_19303_0\"\n" +
+ " },\n" +
+ " \"source\" : [\n" +
+ " {\n" +
+ " \"ID\" : \"KC513508\",\n" +
+ " \"primary_key\" : 22483564,\n" +
+ " \"nucleotide_gi\" : \"451898947\",\n" +
+ " \"name\" : \"gene\",\n" +
+ " \"HA_subtype\" : \"H3\",\n" +
+ " \"segment\" : \"4\",\n" +
+ " \"collection_date\" : \"22-Mar-2010\",\n" +
+ " \"NA_subtype\" : \"N2\",\n" +
+ " \"subtype\" : \"H3\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"standardized_collection_date\" : \"2010-03-22T00:00:00Z\",\n" +
+ " \"segment_name\" : \"HA\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"serotype\" : \"H3N2\",\n" +
+ " \"ncbi_accession\" : \"KC513508\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"mol_type\" : \"viral cRNA\",\n" +
+ " \"taxonomy_strain\" : \"A/Surakarta/1/2010\",\n" +
+ " \"identified_by\" : \"Afiono Agung Prasetyo\",\n" +
+ " \"HA_subtype\" : \"H3\",\n" +
+ " \"collection_date\" : \"22-Mar-2010\",\n" +
+ " \"standardized_collection_date\" : \"2010-03-22T00:00:00Z\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"serotype\" : \"H3N2\",\n" +
+ " \"organism\" : \"Influenza A virus (A/Surakarta/1/2010(H3N2))\",\n" +
+ " \"country\" : \"Indonesia\",\n" +
+ " \"primary_key\" : 22483566,\n" +
+ " \"isolation_source\" : \"nasal and throat swab\",\n" +
+ " \"collected_by\" : \"Afiono Agung Prasetyo\",\n" +
+ " \"name\" : \"source\",\n" +
+ " \"flu_type\" : \"A\",\n" +
+ " \"host\" : \"Homo sapiens\",\n" +
+ " \"db_xref\" : [\n" +
+ " \"taxon:1286265\"\n" +
+ " ],\n" +
+ " \"NA_subtype\" : \"N2\",\n" +
+ " \"strain\" : \"A/Surakarta/1/2010\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22483572,\n" +
+ " \"name\" : \"standard_host\",\n" +
+ " \"Host_NCBI_taxon_id\" : \"9605\",\n" +
+ " \"curation_status_code\" : \"150\",\n" +
+ " \"curation_date\" : \"2015-01-12\",\n" +
+ " \"program_version\" : \"v1.1.7\",\n" +
+ " \"source_tag\" : \"parse_host_v1\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"curation_status_message\" : \"success, archive and add on next major program revision\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22483576,\n" +
+ " \"Location_Lat_Long\" : \"-0.7892749906,113.9213256836\",\n" +
+ " \"name\" : \"standardized_location\",\n" +
+ " \"Location_Country_Alpha2\" : \"ID\",\n" +
+ " \"curation_status_code\" : \"150\",\n" +
+ " \"curation_date\" : \"2015-01-15\",\n" +
+ " \"program_version\" : \"v0.1\",\n" +
+ " \"source_tag\" : \"xxxxx_parse_location_v0\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"curation_status_message\" : \"success, archive and add on next major program revision\",\n" +
+ " \"start-end\" : 1,\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " }\n" +
+ " ],\n" +
+ " \"sequence\" : {\n" +
+ " \"string\" : \"CCCTTATGATGTGCCGGATTATGCCTCCCTTAGGTCACTAGTTGCCTCATCCGGCACACTGGAGTTTAACAGTGAAAGCTTCAATTGGACTGGAGTCACTCAAAACGGAACAAGCTCTGCTTGCATAAGGAGATCTAATAATAGTTTCTTTAGTAGATTGAATTGGTTGACCCACTTAAACTTCAAATACCCAGCATTGAACGTGACTATGCCAAACAATGAACAATTTGACAAATTGTACATTTGGGGGGTTCACCACC\"\n" +
+ " },\n" +
+ " \"references\" : [\n" +
+ " {\n" +
+ " \"authors\" : \"Prasetyo,A.A.\",\n" +
+ " \"location\" : \"Unpublished\",\n" +
+ " \"title\" : \"Molecular Epidemiology Study of Human Respiratory Virus in Surakarta Indonesia\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"authors\" : \"Prasetyo,A.A.\",\n" +
+ " \"location\" : \"Submitted (22-JAN-2013) Microbiology, Faculty of Medicine Sebelas Maret University, Jl. Ir. Sutami 36A, Surakarta, Jawa Tengah 57126, Indonesia\",\n" +
+ " \"title\" : \"Direct Submission\"\n" +
+ " }\n" +
+ " ],\n" +
+ " \"name\" : \"AAAAA_ID_19303_0\",\n" +
+ " \"segments\" : [\n" +
+ " {\n" +
+ " \"identifiers\" : {\n" +
+ " \"bioentry_id\" : 1588885,\n" +
+ " \"namespace\" : \"NCBI\",\n" +
+ " \"primary_id\" : \"KC513508\",\n" +
+ " \"version\" : 1,\n" +
+ " \"name\" : \"KC513508\",\n" +
+ " \"description\" : \"Influenza A virus (A/Surakarta/1/2010(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds.\",\n" +
+ " \"accession\" : \"KC513508\"\n" +
+ " },\n" +
+ " \"source\" : [\n" +
+ " {\n" +
+ " \"mol_type\" : \"viral cRNA\",\n" +
+ " \"identified_by\" : \"Afiono Agung Prasetyo\",\n" +
+ " \"HA_subtype\" : \"H3\",\n" +
+ " \"segment\" : \"4\",\n" +
+ " \"collection_date\" : \"22-Mar-2010\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"serotype\" : \"H3N2\",\n" +
+ " \"organism\" : \"Influenza A virus (A/Surakarta/1/2010(H3N2))\",\n" +
+ " \"country\" : \"Indonesia\",\n" +
+ " \"primary_key\" : 22511042,\n" +
+ " \"isolation_source\" : \"nasal and throat swab\",\n" +
+ " \"collected_by\" : \"Afiono Agung Prasetyo\",\n" +
+ " \"name\" : \"source\",\n" +
+ " \"host\" : \"Homo sapiens\",\n" +
+ " \"NA_subtype\" : \"N2\",\n" +
+ " \"db_xref\" : [\n" +
+ " \"taxon:1286265\"\n" +
+ " ],\n" +
+ " \"strain\" : \"A/Surakarta/1/2010\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511045,\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"gene\" : \"HA\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"name\" : \"gene\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511046,\n" +
+ " \"protein_id\" : \"AGF80141.1\",\n" +
+ " \"gene\" : \"HA\",\n" +
+ " \"name\" : \"CDS\",\n" +
+ " \"db_xref\" : [\n" +
+ " \"GI:451898948\"\n" +
+ " ],\n" +
+ " \"codon_start\" : \"2\",\n" +
+ " \"source_tag\" : \"EMBL/GenBank/SwissProt\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"translation\" : \"PYDVPDYASLRSLVASSGTLEFNSESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIWGVHH\",\n" +
+ " \"product\" : \"hemagglutinin\",\n" +
+ " \"start-end\" : \"1..260\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511053,\n" +
+ " \"name\" : \"asdf_typing\",\n" +
+ " \"segment\" : \"4\",\n" +
+ " \"flu_type\" : \"A\",\n" +
+ " \"bitscore\" : \"277.3\",\n" +
+ " \"full_lineage\" : \"X_XX_XX_XxxxxXxxxx\",\n" +
+ " \"lineage\" : \"AAAAAAAAAA\",\n" +
+ " \"curation_date\" : \"2015-01-07\",\n" +
+ " \"subtype\" : \"H3\",\n" +
+ " \"program_version\" : \"v2.8.2\",\n" +
+ " \"source_tag\" : \"some_text_some\",\n" +
+ " \"Evalue\" : \"4.6e-85\",\n" +
+ " \"segment_name\" : \"HA\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"bitscore\" : \"464\",\n" +
+ " \"subj_location\" : \"342..601\",\n" +
+ " \"slen\" : \"1701\",\n" +
+ " \"sseqid\" : \"someID_someID_some\",\n" +
+ " \"mismatch\" : \"3\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"qcovs\" : \"100\",\n" +
+ " \"qlen\" : \"260\",\n" +
+ " \"qcovhsp\" : \"100\",\n" +
+ " \"primary_key\" : 22511048,\n" +
+ " \"pident\" : \"98.85\",\n" +
+ " \"name\" : \"segtypeAlign\",\n" +
+ " \"qseqid\" : \"KC513508\",\n" +
+ " \"gaps\" : \"0\",\n" +
+ " \"curation_date\" : \"2015-01-15\",\n" +
+ " \"typing\" : \"A_HA_H3\",\n" +
+ " \"length\" : \"260\",\n" +
+ " \"evalue\" : \"2e-132\",\n" +
+ " \"source_tag\" : \"asdf_asdf_asdfv1\",\n" +
+ " \"program_version\" : \"v1.1.2\",\n" +
+ " \"curation_status\" : \"true\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"gapopen\" : \"0\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511060,\n" +
+ " \"name\" : \"standard_host\",\n" +
+ " \"Host_NCBI_taxon_id\" : \"9605\",\n" +
+ " \"curation_status_code\" : \"150\",\n" +
+ " \"curation_date\" : \"2015-01-12\",\n" +
+ " \"program_version\" : \"v1.1.7\",\n" +
+ " \"source_tag\" : \"parse_host_v1\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"curation_status_message\" : \"success, archive and add on next major program revision\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511052,\n" +
+ " \"name\" : \"flu_segtype\",\n" +
+ " \"flu_type\" : \"A\",\n" +
+ " \"curation_date\" : \"2015-01-15\",\n" +
+ " \"subtype\" : \"H3\",\n" +
+ " \"program_version\" : \"v1.1.2\",\n" +
+ " \"source_tag\" : \"asdf_asdf_asd_v1\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"segtype\" : \"HA\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511056,\n" +
+ " \"prot_coord\" : \"115..87\",\n" +
+ " \"name\" : \"exon\",\n" +
+ " \"curation_date\" : \"2015-01-07\",\n" +
+ " \"source_tag\" : \"asdf_asdfas_v2\",\n" +
+ " \"program_version\" : \"v2.8.2\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"start-end\" : \"2..259\",\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"nstart\" : \"2\",\n" +
+ " \"primary_key\" : 22511058,\n" +
+ " \"pend\" : \"200\",\n" +
+ " \"aaseq\" : \"PYDVPDYASLRSLVASSGTLEFNSESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIWGVHH\",\n" +
+ " \"p_pc_coverage\" : \"15.19\",\n" +
+ " \"name\" : \"CDS\",\n" +
+ " \"score\" : \"461\",\n" +
+ " \"nend\" : \"259\",\n" +
+ " \"curation_date\" : \"2015-01-07\",\n" +
+ " \"program_version\" : \"v2.8.2\",\n" +
+ " \"source_tag\" : \"asdf_asdfas_v2\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"product\" : \"A_HA_H3\",\n" +
+ " \"ntlength\" : \"258\",\n" +
+ " \"start-end\" : \"1..260\",\n" +
+ " \"curation_status\" : \"true\",\n" +
+ " \"pstart\" : \"115\"\n" +
+ " },\n" +
+ " {\n" +
+ " \"primary_key\" : 22511062,\n" +
+ " \"Location_Lat_Long\" : \"-0.7892749906,113.9213256836\",\n" +
+ " \"name\" : \"standardized_location\",\n" +
+ " \"Location_Country_Alpha2\" : \"ID\",\n" +
+ " \"curation_status_code\" : \"150\",\n" +
+ " \"curation_date\" : \"2015-01-15\",\n" +
+ " \"program_version\" : \"v0.1\",\n" +
+ " \"source_tag\" : \"asdf_asdf_asdf_asdfn_v0\",\n" +
+ " \"strand\" : \"1\",\n" +
+ " \"curation_status_message\" : \"success, archive and add on next major program revision\",\n" +
+ " \"start-end\" : 1,\n" +
+ " \"curation_status\" : \"true\"\n" +
+ " }\n" +
+ " ],\n" +
+ " \"sequence\" : {\n" +
+ " \"length\" : 260,\n" +
+ " \"string\" : \"CCCTTATGATGTGCCGGATTATGCCTCCCTTAGGTCACTAGTTGCCTCATCCGGCACACTGGAGTTTAACAGTGAAAGCTTCAATTGGACTGGAGTCACTCAAAACGGAACAAGCTCTGCTTGCATAAGGAGATCTAATAATAGTTTCTTTAGTAGATTGAATTGGTTGACCCACTTAAACTTCAAATACCCAGCATTGAACGTGACTATGCCAAACAATGAACAATTTGACAAATTGTACATTTGGGGGGTTCACCACC\"\n" +
+ " },\n" +
+ " \"name\" : \"KC513508\",\n" +
+ " \"annotations\" : {\n" +
+ " \"keyword\" : \"\",\n" +
+ " \"curation_date\" : \"2015-01-03\",\n" +
+ " \"comment\" : [\n" +
+ " \"##Assembly-Data-START## Assembly Method :: CLC Main Workbench v. 6.8 Sequencing Technology :: Sanger dideoxy1 sequencing ##Assembly-Data-END## \"\n" +
+ " ],\n" +
+ " \"date_changed\" : \"25-FEB-2013\",\n" +
+ " \"curation_status\" : \"false\"\n" +
+ " }\n" +
+ " }\n" +
+ " ],\n" +
+ " \"annotations\" : {\n" +
+ " \"keyword\" : \"\",\n" +
+ " \"curation_date\" : \"2015-01-05\",\n" +
+ " \"comment\" : [\n" +
+ " \"##Assembly-Data-START## Assembly Method :: CLC Main Workbench v. 6.8 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## \"\n" +
+ " ]\n" +
+ " }}]}}]";
+
+ RecordingJSONParser parser = new RecordingJSONParser(new StringReader(json));
+ JsonRecordReader recordReader = JsonRecordReader.getInst("/",Collections.singletonList("/**"));
+ try {
+ recordReader.streamRecords(parser, new JsonRecordReader.Handler() {
+ @Override
+ public void handle(Map<String, Object> record, String path) {
+ /*don't care*/
+ }
+ });
+ } catch (RuntimeException e) {
+ parser.error("").printStackTrace();
+ throw e;
+ }
+ }
}