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Posted to commits@ctakes.apache.org by ja...@apache.org on 2012/10/31 07:02:30 UTC
svn commit: r1403996 -
/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/
Author: james-masanz
Date: Wed Oct 31 06:02:29 2012
New Revision: 1403996
URL: http://svn.apache.org/viewvc?rev=1403996&view=rev
Log:
CTAKES-61 Apply Standard ASF license header to all source files.
For the branch used for 2.6-incubating, checking in the header changes now
Modified:
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AbstractClassifier.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnaphoricityAttributeCalculator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotOffsetComparator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationCounter.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationSelector.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AttributeCalculator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/CorefConsts.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/EditDistance.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FSIteratorToList.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FeatureVector.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/GoldStandardLabeler.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/HobbsTreeNavigator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableDepUtils.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableTreeUtils.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/PairAttributeCalculator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ParentPtrTree.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmUtils.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmVectorCreator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/TextMatch.java
incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ThreadDelegator.java
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AbstractClassifier.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AbstractClassifier.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AbstractClassifier.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AbstractClassifier.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,16 +6,15 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @Author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
package edu.mayo.bmi.coref.util;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnaphoricityAttributeCalculator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnaphoricityAttributeCalculator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnaphoricityAttributeCalculator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnaphoricityAttributeCalculator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Jiaping Zheng
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.ArrayList;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotOffsetComparator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotOffsetComparator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotOffsetComparator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotOffsetComparator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
* @author Jiaping Zheng
*/
+
package edu.mayo.bmi.coref.util;
import java.util.Comparator;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationCounter.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationCounter.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationCounter.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationCounter.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Jiaping Zheng
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.Collection;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationSelector.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationSelector.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationSelector.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AnnotationSelector.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Jiaping Zheng
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.ArrayList;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AttributeCalculator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AttributeCalculator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AttributeCalculator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/AttributeCalculator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Jiaping Zheng
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.ArrayList;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/CorefConsts.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/CorefConsts.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/CorefConsts.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/CorefConsts.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
public class CorefConsts {
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/EditDistance.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/EditDistance.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/EditDistance.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/EditDistance.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,18 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
* @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
public class EditDistance {
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FSIteratorToList.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FSIteratorToList.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FSIteratorToList.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FSIteratorToList.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,15 +6,15 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-*/
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ */
package edu.mayo.bmi.coref.util;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FeatureVector.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FeatureVector.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FeatureVector.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/FeatureVector.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Jiaping Zheng
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
public class FeatureVector {
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/GoldStandardLabeler.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/GoldStandardLabeler.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/GoldStandardLabeler.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/GoldStandardLabeler.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.io.BufferedReader;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/HobbsTreeNavigator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/HobbsTreeNavigator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/HobbsTreeNavigator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/HobbsTreeNavigator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.HashMap;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableDepUtils.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableDepUtils.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableDepUtils.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableDepUtils.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import org.apache.uima.cas.FSIterator;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableTreeUtils.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableTreeUtils.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableTreeUtils.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/MarkableTreeUtils.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.util.Iterator;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/PairAttributeCalculator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/PairAttributeCalculator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/PairAttributeCalculator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/PairAttributeCalculator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,18 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Jiaping Zheng
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
* @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.io.File;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ParentPtrTree.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ParentPtrTree.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ParentPtrTree.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ParentPtrTree.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Jiaping Zheng
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Jiaping Zheng
*/
+
package edu.mayo.bmi.coref.util;
public class ParentPtrTree {
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmUtils.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmUtils.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmUtils.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmUtils.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import libsvm.svm_node;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmVectorCreator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmVectorCreator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmVectorCreator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SvmVectorCreator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-@author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.lang.reflect.Method;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
- @author Tim Miller
- *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ * @author Tim Miller
*/
+
package edu.mayo.bmi.coref.util;
import java.io.FileNotFoundException;
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/TextMatch.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/TextMatch.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/TextMatch.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/TextMatch.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,4 @@
+/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -5,17 +6,17 @@
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-
-
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
* @author Jiaping Zheng
*/
+
package edu.mayo.bmi.coref.util;
//TODO: Should be upgraded
Modified: incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ThreadDelegator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ThreadDelegator.java?rev=1403996&r1=1403995&r2=1403996&view=diff
==============================================================================
--- incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ThreadDelegator.java (original)
+++ incubator/ctakes/branches/SHARPn-cTAKES/coref-resolver/src/edu/mayo/bmi/coref/util/ThreadDelegator.java Wed Oct 31 06:02:29 2012
@@ -1,3 +1,20 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License. You may obtain a copy of the License at
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ *
+ */
package edu.mayo.bmi.coref.util;
import org.chboston.cnlp.ctakes.coref.treekernel.training.RowFillerThread;