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Posted to commits@cassandra.apache.org by "Roman S. Borschel (JIRA)" <ji...@apache.org> on 2016/07/14 14:05:21 UTC
[jira] [Updated] (CASSANDRA-12203) AssertionError on compaction
after upgrade (2.1.9 -> 3.7)
[ https://issues.apache.org/jira/browse/CASSANDRA-12203?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Roman S. Borschel updated CASSANDRA-12203:
------------------------------------------
Description:
After upgrading a Cassandra cluster from 2.1.9 to 3.7, one column family (using SizeTieredCompaction) repeatedly and continuously failed compaction (and thus also repair) across the cluster, with all nodes producing the following errors in the logs:
{noformat}
016-07-14T09:29:47.96855 |srv=cassandra|ERROR: Exception in thread Thread[CompactionExecutor:3,1,main]
2016-07-14T09:29:47.96858 |srv=cassandra|java.lang.AssertionError: null
2016-07-14T09:29:47.96859 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$TombstoneTracker.openNew(UnfilteredDeserializer.java:650) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$UnfilteredIterator.hasNext(UnfilteredDeserializer.java:423) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer.hasNext(UnfilteredDeserializer.java:298) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableSimpleIterator$OldFormatIterator.readStaticRow(SSTableSimpleIterator.java:133) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableIdentityIterator.<init>(SSTableIdentityIterator.java:57) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator$1.initializeIterator(BigTableScanner.java:334) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.maybeInit(LazilyInitializedUnfilteredRowIterator.java:48) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.isReverseOrder(LazilyInitializedUnfilteredRowIterator.java:70) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:109) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:100) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$Candidate.consume(MergeIterator.java:408) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.consume(MergeIterator.java:203) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.computeNext(MergeIterator.java:156) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96869 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionCandidate.run(CompactionManager.java:264) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_91]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_91]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_91]
2016-07-14T09:29:47.96871 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_91]
2016-07-14T09:29:47.96871 |srv=cassandra| at java.lang.Thread.run(Thread.java:745) [na:1.8.0_91]
{noformat}
Only 1 out of 14 tables was affected by this problem after the upgrade.
was:
After upgrading a Cassandra cluster from 2.1.9 to 3.7, one column family (using SizeTieredCompaction) repeatedly and continuously fails compaction (and thus also repair) across the cluster, with all nodes producing the following errors in the logs:
{noformat}
016-07-14T09:29:47.96855 |srv=cassandra|ERROR: Exception in thread Thread[CompactionExecutor:3,1,main]
2016-07-14T09:29:47.96858 |srv=cassandra|java.lang.AssertionError: null
2016-07-14T09:29:47.96859 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$TombstoneTracker.openNew(UnfilteredDeserializer.java:650) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$UnfilteredIterator.hasNext(UnfilteredDeserializer.java:423) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer.hasNext(UnfilteredDeserializer.java:298) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableSimpleIterator$OldFormatIterator.readStaticRow(SSTableSimpleIterator.java:133) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableIdentityIterator.<init>(SSTableIdentityIterator.java:57) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator$1.initializeIterator(BigTableScanner.java:334) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.maybeInit(LazilyInitializedUnfilteredRowIterator.java:48) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.isReverseOrder(LazilyInitializedUnfilteredRowIterator.java:70) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:109) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:100) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$Candidate.consume(MergeIterator.java:408) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.consume(MergeIterator.java:203) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.computeNext(MergeIterator.java:156) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96869 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionCandidate.run(CompactionManager.java:264) ~[apache-cassandra-3.7.jar:3.7]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_91]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_91]
2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_91]
2016-07-14T09:29:47.96871 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_91]
2016-07-14T09:29:47.96871 |srv=cassandra| at java.lang.Thread.run(Thread.java:745) [na:1.8.0_91]
{noformat}
Only 1 out of 14 tables was affected by this problem after the upgrade.
> AssertionError on compaction after upgrade (2.1.9 -> 3.7)
> ---------------------------------------------------------
>
> Key: CASSANDRA-12203
> URL: https://issues.apache.org/jira/browse/CASSANDRA-12203
> Project: Cassandra
> Issue Type: Bug
> Components: Compaction
> Environment: Cassandra 3.7 (upgrade from 2.1.9)
> Java version "1.8.0_91"
> Ubuntu 14.04.4 LTS (GNU/Linux 3.13.0-83-generic x86_64)
> Reporter: Roman S. Borschel
>
> After upgrading a Cassandra cluster from 2.1.9 to 3.7, one column family (using SizeTieredCompaction) repeatedly and continuously failed compaction (and thus also repair) across the cluster, with all nodes producing the following errors in the logs:
> {noformat}
> 016-07-14T09:29:47.96855 |srv=cassandra|ERROR: Exception in thread Thread[CompactionExecutor:3,1,main]
> 2016-07-14T09:29:47.96858 |srv=cassandra|java.lang.AssertionError: null
> 2016-07-14T09:29:47.96859 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$TombstoneTracker.openNew(UnfilteredDeserializer.java:650) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer$UnfilteredIterator.hasNext(UnfilteredDeserializer.java:423) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.db.UnfilteredDeserializer$OldFormatDeserializer.hasNext(UnfilteredDeserializer.java:298) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96860 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableSimpleIterator$OldFormatIterator.readStaticRow(SSTableSimpleIterator.java:133) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.SSTableIdentityIterator.<init>(SSTableIdentityIterator.java:57) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96861 |srv=cassandra| at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator$1.initializeIterator(BigTableScanner.java:334) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.maybeInit(LazilyInitializedUnfilteredRowIterator.java:48) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96862 |srv=cassandra| at org.apache.cassandra.db.rows.LazilyInitializedUnfilteredRowIterator.isReverseOrder(LazilyInitializedUnfilteredRowIterator.java:70) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:109) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96863 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$1.reduce(UnfilteredPartitionIterators.java:100) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$Candidate.consume(MergeIterator.java:408) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96864 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.consume(MergeIterator.java:203) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.MergeIterator$ManyToOne.computeNext(MergeIterator.java:156) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96865 |srv=cassandra| at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96866 |srv=cassandra| at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96867 |srv=cassandra| at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96868 |srv=cassandra| at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96869 |srv=cassandra| at org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionCandidate.run(CompactionManager.java:264) ~[apache-cassandra-3.7.jar:3.7]
> 2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_91]
> 2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_91]
> 2016-07-14T09:29:47.96870 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_91]
> 2016-07-14T09:29:47.96871 |srv=cassandra| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_91]
> 2016-07-14T09:29:47.96871 |srv=cassandra| at java.lang.Thread.run(Thread.java:745) [na:1.8.0_91]
> {noformat}
> Only 1 out of 14 tables was affected by this problem after the upgrade.
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