[jira] [Comment Edited] (CTAKES-48) negation annotator - Sentence type used in code not in descr

["Pei Chen (JIRA)" <ji...@apache.org>]

    [ https://issues.apache.org/jira/browse/CTAKES-48?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13685561#comment-13685561 ] 

Pei Chen edited comment on CTAKES-48 at 6/17/13 2:29 PM:
---------------------------------------------------------

Douglas,
Could you clarify which xml descriptor were using that caused this error?
The temp work around is to add in your xml: Similar to what was done in in (https://issues.apache.org/jira/browse/CTAKES-208)

<typeSystemDescription>
<imports>
<import name="org.apache.ctakes.typesystem.types.TypeSystem"/>
</imports>
</typeSystemDescription>
                
      was (Author: chenpei):
    Douglas,
The error looks slightly different-  The original one had edu.mayo references and was missed during re-factoring.  
However, the fix should be fairly straight forward.  Could you clarify which xml descriptor were using that caused this error?
The temp work around is to add in your xml: Similar to what was done in in (https://issues.apache.org/jira/browse/CTAKES-208)

<typeSystemDescription>
<imports>
<import name="org.apache.ctakes.typesystem.types.TypeSystem"/>
</imports>
</typeSystemDescription>
                  
> negation annotator - Sentence type used in code not in descr
> ------------------------------------------------------------
>
>                 Key: CTAKES-48
>                 URL: https://issues.apache.org/jira/browse/CTAKES-48
>             Project: cTAKES
>          Issue Type: Improvement
>            Reporter: Pei Chen
>            Priority: Minor
>
> Found at the SHARPn summit/f2f:
> tried to run the negation annotator by itself and this error was thrown:
> Caused by: org.apache.uima.cas.CASRuntimeException: JCas type "edu.mayo.bmi.uima.core.type.textspan.Sentence" used in Java code, but was not declared in the XML type descriptor.
> at org.apache.uima.jcas.impl.JCasImpl.getType(JCasImpl.java:412)
> at org.apache.uima.jcas.impl.JCasImpl.getCasType(JCasImpl.java:436)
> at org.apache.uima.jcas.impl.JCasImpl.getAnnotationIndex(JCasImpl.java:1531)
> at edu.mayo.bmi.uima.context.ContextAnnotator.process(ContextAnnotator.java:2

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