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Posted to issues@spark.apache.org by "Jakub Nowacki (JIRA)" <ji...@apache.org> on 2016/12/03 16:33:59 UTC

[jira] [Created] (SPARK-18699) Spark CSV parsing types other than String throws exception when malformed

Jakub Nowacki created SPARK-18699:
-------------------------------------

             Summary: Spark CSV parsing types other than String throws exception when malformed
                 Key: SPARK-18699
                 URL: https://issues.apache.org/jira/browse/SPARK-18699
             Project: Spark
          Issue Type: Bug
          Components: SQL
    Affects Versions: 2.0.2
            Reporter: Jakub Nowacki


If CSV is read and the schema contains any other type than String, exception is thrown when the string value in CSV is malformed; e.g. if the timestamp does not match the defined one, an exception is thrown:
{code}
Caused by: java.lang.IllegalArgumentException
	at java.sql.Date.valueOf(Date.java:143)
	at org.apache.spark.sql.catalyst.util.DateTimeUtils$.stringToTime(DateTimeUtils.scala:137)
	at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply$mcJ$sp(CSVInferSchema.scala:272)
	at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply(CSVInferSchema.scala:272)
	at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$$anonfun$castTo$6.apply(CSVInferSchema.scala:272)
	at scala.util.Try.getOrElse(Try.scala:79)
	at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$.castTo(CSVInferSchema.scala:269)
	at org.apache.spark.sql.execution.datasources.csv.CSVRelation$$anonfun$csvParser$3.apply(CSVRelation.scala:116)
	at org.apache.spark.sql.execution.datasources.csv.CSVRelation$$anonfun$csvParser$3.apply(CSVRelation.scala:85)
	at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$1$$anonfun$apply$2.apply(CSVFileFormat.scala:128)
	at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$1$$anonfun$apply$2.apply(CSVFileFormat.scala:127)
	at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)
	at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
	at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)
	at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:91)
	at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
	at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
	at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:370)
	at org.apache.spark.sql.execution.datasources.DefaultWriterContainer$$anonfun$writeRows$1.apply$mcV$sp(WriterContainer.scala:253)
	at org.apache.spark.sql.execution.datasources.DefaultWriterContainer$$anonfun$writeRows$1.apply(WriterContainer.scala:252)
	at org.apache.spark.sql.execution.datasources.DefaultWriterContainer$$anonfun$writeRows$1.apply(WriterContainer.scala:252)
	at org.apache.spark.util.Utils$.tryWithSafeFinallyAndFailureCallbacks(Utils.scala:1348)
	at org.apache.spark.sql.execution.datasources.DefaultWriterContainer.writeRows(WriterContainer.scala:258)
	... 8 more
{code}

It behaves similarly with Integer and Long types, from what I've seen.

To my understanding modes PERMISSIVE and DROPMALFORMED should just null the value or drop the line, but instead they kill the job.



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