[jira] [Created] (FLINK-9291) Checkpoint failure (CIRCULAR REFERENCE:java.lang.NegativeArraySizeException)

["Narayanan Arunachalam (JIRA)" <ji...@apache.org>]

Narayanan Arunachalam created FLINK-9291:
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             Summary: Checkpoint failure (CIRCULAR REFERENCE:java.lang.NegativeArraySizeException)
                 Key: FLINK-9291
                 URL: https://issues.apache.org/jira/browse/FLINK-9291
             Project: Flink
          Issue Type: Bug
            Reporter: Narayanan Arunachalam


Using rocksdb for state and after running for few hours, checkpointing fails with the following error. The job recovers fine after this.
AsynchronousException\{java.lang.Exception: Could not materialize checkpoint 215 for operator makeSalpTrace -> countTraces -> makeZipkinTrace -> (Map -> Sink: bs, Sink: es) (14/80).}
	at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:948)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.Exception: Could not materialize checkpoint 215 for operator makeSalpTrace -> countTraces -> makeZipkinTrace -> (Map -> Sink: bs, Sink: es) (14/80).
	... 6 more
Caused by: java.util.concurrent.ExecutionException: java.lang.NegativeArraySizeException
	at java.util.concurrent.FutureTask.report(FutureTask.java:122)
	at java.util.concurrent.FutureTask.get(FutureTask.java:192)
	at org.apache.flink.util.FutureUtil.runIfNotDoneAndGet(FutureUtil.java:43)
	at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:894)
	... 5 more
	Suppressed: java.lang.Exception: Could not properly cancel managed keyed state future.
		at org.apache.flink.streaming.api.operators.OperatorSnapshotResult.cancel(OperatorSnapshotResult.java:91)
		at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.cleanup(StreamTask.java:976)
		at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:939)
		... 5 more
	Caused by: java.util.concurrent.ExecutionException: java.lang.NegativeArraySizeException
		at java.util.concurrent.FutureTask.report(FutureTask.java:122)
		at java.util.concurrent.FutureTask.get(FutureTask.java:192)
		at org.apache.flink.util.FutureUtil.runIfNotDoneAndGet(FutureUtil.java:43)
		at org.apache.flink.runtime.state.StateUtil.discardStateFuture(StateUtil.java:66)
		at org.apache.flink.streaming.api.operators.OperatorSnapshotResult.cancel(OperatorSnapshotResult.java:89)
		... 7 more
	Caused by: java.lang.NegativeArraySizeException
		at org.rocksdb.RocksIterator.value0(Native Method)
		at org.rocksdb.RocksIterator.value(RocksIterator.java:50)
		at org.apache.flink.contrib.streaming.state.RocksDBKeyedStateBackend$RocksDBMergeIterator.value(RocksDBKeyedStateBackend.java:1898)
		at org.apache.flink.contrib.streaming.state.RocksDBKeyedStateBackend$RocksDBFullSnapshotOperation.writeKVStateData(RocksDBKeyedStateBackend.java:704)
		at org.apache.flink.contrib.streaming.state.RocksDBKeyedStateBackend$RocksDBFullSnapshotOperation.writeDBSnapshot(RocksDBKeyedStateBackend.java:556)
		at org.apache.flink.contrib.streaming.state.RocksDBKeyedStateBackend$3.performOperation(RocksDBKeyedStateBackend.java:466)
		at org.apache.flink.contrib.streaming.state.RocksDBKeyedStateBackend$3.performOperation(RocksDBKeyedStateBackend.java:424)
		at org.apache.flink.runtime.io.async.AbstractAsyncCallableWithResources.call(AbstractAsyncCallableWithResources.java:75)
		at java.util.concurrent.FutureTask.run(FutureTask.java:266)
		at org.apache.flink.util.FutureUtil.runIfNotDoneAndGet(FutureUtil.java:40)
		at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:894)
		... 5 more
	[CIRCULAR REFERENCE:java.lang.NegativeArraySizeException]



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