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Posted to issues@spark.apache.org by "Thomas Graves (JIRA)" <ji...@apache.org> on 2017/03/03 15:42:45 UTC
[jira] [Updated] (SPARK-19812) YARN shuffle service fails to
relocate recovery DB directories
[ https://issues.apache.org/jira/browse/SPARK-19812?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Thomas Graves updated SPARK-19812:
----------------------------------
Summary: YARN shuffle service fails to relocate recovery DB directories (was: YARN shuffle service fix moving recovery DB directories)
> YARN shuffle service fails to relocate recovery DB directories
> --------------------------------------------------------------
>
> Key: SPARK-19812
> URL: https://issues.apache.org/jira/browse/SPARK-19812
> Project: Spark
> Issue Type: Bug
> Components: YARN
> Affects Versions: 2.0.1
> Reporter: Thomas Graves
> Assignee: Thomas Graves
>
> The yarn shuffle service tries to switch from the yarn local directories to the real recovery directory but can fail to move the existing recovery db's. It fails due to Files.move not doing directories that have contents.
> 2017-03-03 14:57:19,558 [main] ERROR yarn.YarnShuffleService: Failed to move recovery file sparkShuffleRecovery.ldb to the path /mapred/yarn-nodemanager/nm-aux-services/spark_shuffle
> java.nio.file.DirectoryNotEmptyException:/yarn-local/sparkShuffleRecovery.ldb
> at sun.nio.fs.UnixCopyFile.move(UnixCopyFile.java:498)
> at sun.nio.fs.UnixFileSystemProvider.move(UnixFileSystemProvider.java:262)
> at java.nio.file.Files.move(Files.java:1395)
> at org.apache.spark.network.yarn.YarnShuffleService.initRecoveryDb(YarnShuffleService.java:369)
> at org.apache.spark.network.yarn.YarnShuffleService.createSecretManager(YarnShuffleService.java:200)
> at org.apache.spark.network.yarn.YarnShuffleService.serviceInit(YarnShuffleService.java:174)
> at org.apache.hadoop.service.AbstractService.init(AbstractService.java:163)
> at org.apache.hadoop.yarn.server.nodemanager.containermanager.AuxServices.serviceInit(AuxServices.java:143)
> at org.apache.hadoop.service.AbstractService.init(AbstractService.java:163)
> at org.apache.hadoop.service.CompositeService.serviceInit(CompositeService.java:107)
> at org.apache.hadoop.yarn.server.nodemanager.containermanager.ContainerManagerImpl.serviceInit(ContainerManagerImpl.java:262)
> at org.apache.hadoop.service.AbstractService.init(AbstractService.java:163)
> at org.apache.hadoop.service.CompositeService.serviceInit(CompositeService.java:107)
> at org.apache.hadoop.yarn.server.nodemanager.NodeManager.serviceInit(NodeManager.java:357)
> at org.apache.hadoop.service.AbstractService.init(AbstractService.java:163)
> at org.apache.hadoop.yarn.server.nodemanager.NodeManager.initAndStartNodeManager(NodeManager.java:636)
> at org.apache.hadoop.yarn.server.nodemanager.NodeManager.main(NodeManager.java:684)
> This used to use f.renameTo and we switched it in the pr due to review comments and it looks like didn't do a final real test. The tests are using files rather then directories so it didn't catch. We need to fix the test also.
> history: https://github.com/apache/spark/pull/14999/commits/65de8531ccb91287f5a8a749c7819e99533b9440
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