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Posted to jira@arrow.apache.org by "Krisztian Szucs (Jira)" <ji...@apache.org> on 2021/06/22 15:48:00 UTC

[jira] [Resolved] (ARROW-12983) [C++][Python] Converter::Extend gets stuck in infinite loop causing OOM if values don't fit in single chunk

     [ https://issues.apache.org/jira/browse/ARROW-12983?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Krisztian Szucs resolved ARROW-12983.
-------------------------------------
    Fix Version/s: 5.0.0
       Resolution: Fixed

Issue resolved by pull request 10556
[https://github.com/apache/arrow/pull/10556]

> [C++][Python] Converter::Extend gets stuck in infinite loop causing OOM if values don't fit in single chunk
> -----------------------------------------------------------------------------------------------------------
>
>                 Key: ARROW-12983
>                 URL: https://issues.apache.org/jira/browse/ARROW-12983
>             Project: Apache Arrow
>          Issue Type: Bug
>          Components: C++
>    Affects Versions: 4.0.0, 4.0.1
>            Reporter: Laurent Mazare
>            Assignee: David Li
>            Priority: Major
>              Labels: pull-request-available
>             Fix For: 5.0.0
>
>          Time Spent: 5h 10m
>  Remaining Estimate: 0h
>
> _Apologies if this is a duplicate, I haven't found anything related_
> When creating an arrow table via the python api, the following code runs out of memory after using all the available resources on a box with 512GB of ram. This happens with pyarrow 4.0.0 and 4.0.1. However when running the same code with pyarrow 3.0.0, the memory usage only reaches 5GB (which seems like the appropriate ballpark for the table size).
>  The code generates a table with a single string column with 1m rows, each string being 3000 characters long.
> Not sure whether the issue is python related or not, I haven't tried replicating it from the C++ api.
>  
> {code:python}
> import os, string
> import numpy as np
> import pyarrow as pa
> print(pa.__version__)
> np.random.seed(42)
> alphabet = list(string.ascii_uppercase)
> _col = []
> for _n in range(1000):
>   k = ''.join(np.random.choice(alphabet, 3000))
>   _col += [k] * 1000
> table = pa.Table.from_pydict({'col': _col})
> {code}



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