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Posted to commits@airavata.apache.org by di...@apache.org on 2018/05/02 14:06:27 UTC
[airavata] branch master updated (f79c7f7 -> a6e5782)
This is an automated email from the ASF dual-hosted git repository.
dimuthuupe pushed a change to branch master
in repository https://gitbox.apache.org/repos/asf/airavata.git.
from f79c7f7 Added vhost server alias for searching SRA
new baf6974 Adding missing emails to gfac config
new a6e5782 Logging improvements
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Summary of changes:
dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2 | 3 +++
.../main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java | 5 ++++-
2 files changed, 7 insertions(+), 1 deletion(-)
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[airavata] 02/02: Logging improvements
Posted by di...@apache.org.
This is an automated email from the ASF dual-hosted git repository.
dimuthuupe pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/airavata.git
commit a6e57823a4fe0b14dc1ec48cfa4a733cda1bd275
Author: dimuthu <di...@gmail.com>
AuthorDate: Wed May 2 10:03:44 2018 -0400
Logging improvements
---
.../main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/modules/gfac/gfac-impl/src/main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java b/modules/gfac/gfac-impl/src/main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java
index 0dd6383..454900f 100644
--- a/modules/gfac/gfac-impl/src/main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java
+++ b/modules/gfac/gfac-impl/src/main/java/org/apache/airavata/gfac/impl/HPCRemoteCluster.java
@@ -203,6 +203,7 @@ public class HPCRemoteCluster extends AbstractRemoteCluster{
public List<String> getFileNameFromExtension(String fileRegex, String parentPath, Session session) throws GFacException {
try {
List<String> fileNames = SSHUtils.listDirectory(parentPath, session);
+ log.info("All files that are available in the path " + parentPath + " : " + fileNames.toString());
List<String> matchingNames = new ArrayList<>();
for(String fileName : fileNames){
String tempFileName = fileName;
@@ -223,7 +224,9 @@ public class HPCRemoteCluster extends AbstractRemoteCluster{
matchingNames.add(fileName);
}
}
- log.warn("No matching file found for extension: " + fileRegex + " in the " + parentPath + " directory");
+ if (matchingNames.isEmpty()) {
+ log.warn("No matching file found for extension: " + fileRegex + " in the " + parentPath + " directory");
+ }
return matchingNames;
} catch (Exception e) {
e.printStackTrace();
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[airavata] 01/02: Adding missing emails to gfac config
Posted by di...@apache.org.
This is an automated email from the ASF dual-hosted git repository.
dimuthuupe pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/airavata.git
commit baf6974c61230ff5807cacf55b59632ff9205a1d
Author: dimuthu <di...@gmail.com>
AuthorDate: Wed May 2 09:58:35 2018 -0400
Adding missing emails to gfac config
---
dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2 | 3 +++
1 file changed, 3 insertions(+)
diff --git a/dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2 b/dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2
index d06b910..1ab74bf 100644
--- a/dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2
+++ b/dev-tools/ansible/roles/gfac/templates/gfac-config.yaml.j2
@@ -88,6 +88,7 @@ resources:
- smic3 <sm...@mail.hpc.lsu.edu> # philip.hpc.lsu
- adm@jetstream-cloud.org
- adm <ad...@smic3.hpc.lsu.edu> #supermic
+ - root <ad...@alamo.uthscsa.edu> #alamo
- jobManagerType: SLURM
commandOutputParser: org.apache.airavata.gfac.impl.job.SlurmOutputParser
@@ -112,6 +113,8 @@ resources:
- slurm@sra-master.jetstreamlocal #Searching SRA
- Slurm Admin <sl...@hpclogin01.rs.gsu.edu> #GSU cluster
- slurm@head.cluster #USD cluster
+ - slurm@js-169-158.jetstream-cloud.org
+ - slurm@joker.nmsu.edu
- jobManagerType: UGE
commandOutputParser: org.apache.airavata.gfac.impl.job.UGEOutputParser
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