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Posted to dev@jena.apache.org by "Alexander Dutton (JIRA)" <ji...@apache.org> on 2012/09/08 12:58:08 UTC
[jira] [Commented] (JENA-163) TDBException: Different ids for
: allocated: expected [...], got [...]
[ https://issues.apache.org/jira/browse/JENA-163?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13451308#comment-13451308 ]
Alexander Dutton commented on JENA-163:
---------------------------------------
I've just come across this when uploading http://creativecommons.org/publicdomain/zero/1.0/rdf to a clean TDB using:
# curl -XPUT "http://localhost:3030/public/data?graph=http://creativecommons.org/publicdomain/zero/1.0/rdf" -d@rdf -H"Content-type: application/rdf+xml"
Version numbers:
{code}
Jena: VERSION: 2.7.2
Jena: BUILD_DATE: 2012-06-28T14:39:01+0100
ARQ: VERSION: 2.9.2
ARQ: BUILD_DATE: 2012-06-28T14:39:01+0100
TDB: VERSION: 0.9.2
TDB: BUILD_DATE: 2012-06-28T14:39:01+0100
Fuseki: VERSION: 0.2.3
Fuseki: BUILD_DATE: 2012-06-28T14:39:01+0100
{code}
{code}
[root@opendata<staging> ~]# rm -rf /srv/humfrey/dataox/tdb/public/
[root@opendata<staging> ~]# /usr/bin/java -jar /usr/share/java/fuseki-server.jar --config /srv/humfrey/dataox/conf/fuseki.ttl
WARN No such directory for static content: ./pages
INFO Configuration file: /srv/humfrey/dataox/conf/fuseki.ttl
INFO Service: <<blank node>>
INFO name = public
INFO query = /public/query
INFO update = /public/update
INFO graphStore(RW) = /public/data
INFO graphStore(R) = /public/get
INFO Service: <<blank node>>
INFO name = courses
INFO query = /courses/query
INFO update = /courses/update
INFO graphStore(RW) = /courses/data
INFO graphStore(R) = /courses/get
INFO Service: <<blank node>>
INFO name = equipment
INFO query = /equipment/query
INFO update = /equipment/update
INFO graphStore(RW) = /equipment/data
INFO graphStore(R) = /equipment/get
INFO Dataset path = /public
INFO Dataset path = /courses
INFO Dataset path = /equipment
INFO Fuseki 0.2.3 2012-06-28T14:39:01+0100
INFO Jetty 7.x.y-SNAPSHOT
INFO Started 2012/09/08 11:44:49 BST on port 3030
INFO [1] PUT http://localhost:3030/public/data?graph=http://creativecommons.org/publicdomain/zero/1.0/rdf
WARN {W115} Primary subtag must be between 1 and 8 alpha characters: sr@latin
WARN Language not valid: sr@latin
WARN {W116} RFC 3066 section 2.3 mandates the use of 'oc' instead of 'oci'.
WARN {W115} Primary subtag must be between 1 and 8 alpha characters: i18n
WARN Language not valid: i18n
WARN {W131} String not in Unicode Normal Form C: "CC0 1.0 সার্বজনীন"
Different ids for http://xmlns.com/foaf/0.1/logo: allocated: expected [000000000000041D], got [000000000000041A]
>>>>>>>>>>
label = nodes
txn = Transaction: 1 : Mode=WRITE : State=PREPARING : /srv/humfrey/dataox/tdb/public/
offset = 0
journalStartOffset = 0
journal = nodes.dat-jrnl
WARN Transaction still active in endWriter - no commit or abort seen (forced abort)
WARN Exception in forced abort (trying to continue)
com.hp.hpl.jena.tdb.transaction.TDBTransactionException: Transaction has already committed or aborted
at com.hp.hpl.jena.tdb.transaction.Transaction.abort(Transaction.java:146)
at com.hp.hpl.jena.tdb.transaction.DatasetGraphTxn.abort(DatasetGraphTxn.java:45)
at com.hp.hpl.jena.tdb.transaction.DatasetGraphTransaction._abort(DatasetGraphTransaction.java:155)
at com.hp.hpl.jena.tdb.migrate.DatasetGraphTrackActive.abort(DatasetGraphTrackActive.java:68)
at org.apache.jena.fuseki.servlets.HttpAction.endWrite(HttpAction.java:119)
at org.apache.jena.fuseki.servlets.SPARQL_REST_RW.doPut(SPARQL_REST_RW.java:73)
at org.apache.jena.fuseki.servlets.SPARQL_REST.dispatch(SPARQL_REST.java:216)
at org.apache.jena.fuseki.servlets.SPARQL_REST.perform(SPARQL_REST.java:190)
at org.apache.jena.fuseki.servlets.SPARQL_ServletBase.doCommon(SPARQL_ServletBase.java:92)
at org.apache.jena.fuseki.servlets.SPARQL_REST.service(SPARQL_REST.java:176)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:820)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:547)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1359)
at org.eclipse.jetty.servlets.UserAgentFilter.doFilter(UserAgentFilter.java:77)
at org.eclipse.jetty.servlets.GzipFilter.doFilter(GzipFilter.java:181)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1330)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:478)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:225)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:941)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:409)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:186)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:875)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:117)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:110)
at org.eclipse.jetty.server.Server.handle(Server.java:349)
at org.eclipse.jetty.server.HttpConnection.handleRequest(HttpConnection.java:441)
at org.eclipse.jetty.server.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:919)
at org.eclipse.jetty.http.HttpParser.parseNext(HttpParser.java:588)
at org.eclipse.jetty.http.HttpParser.parseAvailable(HttpParser.java:218)
at org.eclipse.jetty.server.BlockingHttpConnection.handle(BlockingHttpConnection.java:50)
at org.eclipse.jetty.server.nio.BlockingChannelConnector$BlockingChannelEndPoint.run(BlockingChannelConnector.java:293)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:598)
at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:533)
at java.lang.Thread.run(Thread.java:636)
WARN [1] RC = 500 : Different ids for http://xmlns.com/foaf/0.1/logo: allocated: expected [000000000000041D], got [000000000000041A]
com.hp.hpl.jena.tdb.TDBException: Different ids for http://xmlns.com/foaf/0.1/logo: allocated: expected [000000000000041D], got [000000000000041A]
at com.hp.hpl.jena.tdb.transaction.NodeTableTrans.inconsistent(NodeTableTrans.java:212)
at com.hp.hpl.jena.tdb.transaction.NodeTableTrans.append(NodeTableTrans.java:200)
at com.hp.hpl.jena.tdb.transaction.NodeTableTrans.writeNodeJournal(NodeTableTrans.java:306)
at com.hp.hpl.jena.tdb.transaction.NodeTableTrans.commitPrepare(NodeTableTrans.java:266)
at com.hp.hpl.jena.tdb.transaction.Transaction.prepare(Transaction.java:131)
at com.hp.hpl.jena.tdb.transaction.Transaction.commit(Transaction.java:112)
at com.hp.hpl.jena.tdb.transaction.DatasetGraphTxn.commit(DatasetGraphTxn.java:40)
at com.hp.hpl.jena.tdb.transaction.DatasetGraphTransaction._commit(DatasetGraphTransaction.java:148)
at com.hp.hpl.jena.tdb.migrate.DatasetGraphTrackActive.commit(DatasetGraphTrackActive.java:60)
at org.apache.jena.fuseki.servlets.HttpAction.commit(HttpAction.java:104)
at org.apache.jena.fuseki.servlets.SPARQL_REST_RW.doPut(SPARQL_REST_RW.java:72)
at org.apache.jena.fuseki.servlets.SPARQL_REST.dispatch(SPARQL_REST.java:216)
at org.apache.jena.fuseki.servlets.SPARQL_REST.perform(SPARQL_REST.java:190)
at org.apache.jena.fuseki.servlets.SPARQL_ServletBase.doCommon(SPARQL_ServletBase.java:92)
at org.apache.jena.fuseki.servlets.SPARQL_REST.service(SPARQL_REST.java:176)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:820)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:547)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1359)
at org.eclipse.jetty.servlets.UserAgentFilter.doFilter(UserAgentFilter.java:77)
at org.eclipse.jetty.servlets.GzipFilter.doFilter(GzipFilter.java:181)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1330)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:478)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:225)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:941)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:409)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:186)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:875)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:117)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:110)
at org.eclipse.jetty.server.Server.handle(Server.java:349)
at org.eclipse.jetty.server.HttpConnection.handleRequest(HttpConnection.java:441)
at org.eclipse.jetty.server.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:919)
at org.eclipse.jetty.http.HttpParser.parseNext(HttpParser.java:588)
at org.eclipse.jetty.http.HttpParser.parseAvailable(HttpParser.java:218)
at org.eclipse.jetty.server.BlockingHttpConnection.handle(BlockingHttpConnection.java:50)
at org.eclipse.jetty.server.nio.BlockingChannelConnector$BlockingChannelEndPoint.run(BlockingChannelConnector.java:293)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:598)
at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:533)
at java.lang.Thread.run(Thread.java:636)
INFO [1] 500 Different ids for http://xmlns.com/foaf/0.1/logo: allocated: expected [000000000000041D], got [000000000000041A]
{code}
> TDBException: Different ids for <uri>: allocated: expected [...], got [...]
> ----------------------------------------------------------------------------
>
> Key: JENA-163
> URL: https://issues.apache.org/jira/browse/JENA-163
> Project: Apache Jena
> Issue Type: Bug
> Components: TDB
> Reporter: Andy Seaborne
> Assignee: Andy Seaborne
> Fix For: TDB 0.9.0
>
>
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