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Posted to jira@arrow.apache.org by "Sarah Gilmore (Jira)" <ji...@apache.org> on 2021/06/28 19:02:00 UTC
[jira] [Assigned] (ARROW-12855) error: no member named
'TableReader' in namespace during compilation
[ https://issues.apache.org/jira/browse/ARROW-12855?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Sarah Gilmore reassigned ARROW-12855:
-------------------------------------
Assignee: Sarah Gilmore
> error: no member named 'TableReader' in namespace during compilation
> --------------------------------------------------------------------
>
> Key: ARROW-12855
> URL: https://issues.apache.org/jira/browse/ARROW-12855
> Project: Apache Arrow
> Issue Type: Bug
> Components: MATLAB
> Affects Versions: 4.0.0
> Environment: MATLAB 2020a, Mac OS 11.2.1
> Reporter: Andraž Matkovič
> Assignee: Sarah Gilmore
> Priority: Major
> Labels: matlab
>
> I followed instructions for compilation of arrow under MATLAB ([https://github.com/apache/arrow/tree/master/matlab).] First I set environment variable ARROW_HOME, e.g.
>
> {code:java}
> setenv ARROW_HOME ~/.pyenv/versions/3.8.0/lib/python3.8/site-packages/pyarrow
> {code}
> (I also tried other pyarrow versions, even /usr/local, it's always the same).
>
> Next, when I run compile in MATLAB I get the following error:
> {code:java}
> Verbose mode is on.Verbose mode is on.... Looking for compiler 'Xcode Clang++' ...... Looking for environment variable 'DEVELOPER_DIR' ...No.... Executing command 'xcode-select -print-path' ...Yes ('/Applications/Xcode.app/Contents/Developer').... Looking for folder '/Applications/Xcode.app/Contents/Developer' ...Yes.... Executing command 'which xcrun' ...Yes ('/usr/bin/xcrun').... Looking for folder '/usr/bin' ...Yes.... Executing command 'defaults read com.apple.dt.Xcode IDEXcodeVersionForAgreedToGMLicense' ...No.... Executing command 'defaults read /Library/Preferences/com.apple.dt.Xcode IDEXcodeVersionForAgreedToGMLicense' ...Yes ('11.0').... Executing command 'agreed=11.0 if echo $agreed | grep -E '[\.\"]' >/dev/null; then lhs=`expr "$agreed" : '\([0-9]*\)[\.].*'` rhs=`expr "$agreed" : '[0-9]*[\.]\(.*\)$'` if echo $rhs | grep -E '[\."]' >/dev/null; then rhs=`expr "$rhs" : '\([0-9]*\)[\.].*'` fi if [ $lhs -gt 4 ] || ( [ $lhs -eq 4 ] && [ $rhs -ge 3 ] ); then echo $agreed else exit 1 fi fi' ...Yes ('11.0').... Executing command 'xcrun -sdk macosx --show-sdk-path' ...Yes ('/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk').... Executing command 'xcrun -sdk macosx --show-sdk-version | awk 'BEGIN {FS="."} ; {print $1"."$2}'' ...Yes ('11.1').... Executing command 'clang --version | grep -Eo '[0-9]+\.[0-9]+\.[0-9]'|head -1' ...Yes ('12.0.0').Found installed compiler 'Xcode Clang++'.Set INCLUDE = /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/12.0.0/include;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/System/Library/Frameworks;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/12.0.0/include;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/System/Library/Frameworks;Options file details------------------------------------------------------------------- Compiler location: /Applications/Xcode.app/Contents/Developer Options file: /Users/andraz/Library/Application Support/MathWorks/MATLAB/R2020a/mex_C++_maci64.xml CMDLINE200 : /usr/bin/xcrun -sdk macosx11.1 clang++ \-Wl,-twolevel_namespace -undefined error -arch x86_64 -mmacosx-version-min=10.9 -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib' -O -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map" -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/c_exportsmexfileversion.map" -Wl,-U,_mexCreateMexFunction -Wl,-U,_mexDestroyMexFunction -Wl,-U,_mexFunctionAdapter -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/cppMexFunction.map" /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o -larrow -L/usr/local/lib -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx -lmex -lmat -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64" -lMatlabDataArray -lMatlabEngine -o /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64 CC : /usr/bin/xcrun -sdk macosx11.1 clang CXX : /usr/bin/xcrun -sdk macosx11.1 clang++ DEFINES : -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE MATLABMEX : -DMATLAB_MEX_FILE MACOSX_DEPLOYMENT_TARGET : 10.9 CFLAGS : -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk CXXFLAGS : -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ INCLUDE : -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" CXXOPTIMFLAGS : -O2 -fwrapv -DNDEBUG CXXDEBUGFLAGS : -g LD : /usr/bin/xcrun -sdk macosx11.1 clang LDXX : /usr/bin/xcrun -sdk macosx11.1 clang++ LDFLAGS : \-Wl,-twolevel_namespace -undefined error -arch x86_64 -mmacosx-version-min=10.9 -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib' LDBUNDLE : -bundle LINKEXPORT : -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map" LINKEXPORTVER : -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/c_exportsmexfileversion.map" LINKEXPORTCPP : -Wl,-U,_mexCreateMexFunction -Wl,-U,_mexDestroyMexFunction -Wl,-U,_mexFunctionAdapter -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/cppMexFunction.map" LINKLIBS : -larrow -L/usr/local/lib -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx -lmex -lmat -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64" -lMatlabDataArray -lMatlabEngine LDOPTIMFLAGS : -O LDDEBUGFLAGS : -g OBJEXT : .o LDEXT : .mexmaci64 SETENV : CC="/usr/bin/xcrun -sdk macosx11.1 clang" CXX="/usr/bin/xcrun -sdk macosx11.1 clang++" CFLAGS="-fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE " CXXFLAGS="-fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE " COPTIMFLAGS="-O2 -fwrapv -DNDEBUG" CXXOPTIMFLAGS="-O2 -fwrapv -DNDEBUG" CDEBUGFLAGS="-g" CXXDEBUGFLAGS="-g" LD="/usr/bin/xcrun -sdk macosx11.1 clang" LDXX="/usr/bin/xcrun -sdk macosx11.1 clang++" LDFLAGS="\-Wl,-twolevel_namespace -undefined error -arch x86_64 -mmacosx-version-min=10.9 -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib' -larrow -L/usr/local/lib -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx -lmex -lmat -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64" -lMatlabDataArray -lMatlabEngine -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map"" LDDEBUGFLAGS="-g" DEVELOPER_DIR_CHECK : XCODE_DIR : /Applications/Xcode.app/Contents/Developer XCRUN_DIR : /usr/bin XCODE_AGREED_VERSION : 11.0 ISYSROOT : /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk SDKVER : 11.1 CLANG_VERSION : 12.0.0 MATLABROOT : /Applications/MATLAB_R2020a.app ARCH : maci64 SRC : "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc";"/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.cc";"/Applications/Toolboxes/arrow/matlab/build_support/../src/util/handle_status.cc";"/Applications/MATLAB_R2020a.app/extern/version/cpp_mexapi_version.cpp" OBJ : /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o OBJS : /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o SRCROOT : /Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex DEF : /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.def EXP : "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.exp" LIB : "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.lib" EXE : /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64 ILK : "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.ilk" MANIFEST : "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64.manifest" TEMPNAME : /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex EXEDIR : /Applications/Toolboxes/arrow/matlab/build_support/../build/ EXENAME : featherreadmex OPTIM : -O2 -fwrapv -DNDEBUG LINKOPTIM : -O CMDLINE100_0 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc" -o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o CMDLINE100_1 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG "/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.cc" -o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o CMDLINE100_2 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG "/Applications/Toolboxes/arrow/matlab/build_support/../src/util/handle_status.cc" -o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o CMDLINE100_3 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG "/Applications/MATLAB_R2020a.app/extern/version/cpp_mexapi_version.cpp" -o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o-------------------------------------------------------------------Building with 'Xcode Clang++'./usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include" -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc" -o /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.oError using mexIn file included from/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc:22:/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.h:69:33: error:no member named 'TableReader' in namespace 'arrow::ipc::feather' std::unique_ptr<ipc::feather::TableReader> table_reader_; ~~~~~~~~~~~~~~^1 error generated.Error in compile (line 33)mex(fullfile(vars.srcDir, "featherreadmex.cc"), ...{code}
> I tried this in MATLAB R2020a and R2021a. I'm not familiar with C++ so I don't know how to resolve the error.
>
> !chrome-extension://pccckmaobkjjboncdfnnofkonhgpceea/images/loading.gif!
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