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Posted to github@arrow.apache.org by GitBox <gi...@apache.org> on 2021/05/21 16:45:49 UTC

[GitHub] [arrow] lidavidm opened a new pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

lidavidm opened a new pull request #10376:
URL: https://github.com/apache/arrow/pull/10376


   This exposes the same API as for Parquet fragments.


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[GitHub] [arrow] ursabot commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152197


   Benchmark runs are scheduled for baseline = 78c88a9f517b540ea010a6bd6a8c8f6d91769559 and contender = 8c8f05783b9282a4d5c76be971cbb5e479811499. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Scheduled] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9e3420617f0d41679b3fc26c9fa3b814...f3c3c436e0f141839e96f513be9abce3/)
   [Scheduled] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/e76411e0d6e14bac94541c292ce1b50a...cc398b1f047840b2af7186b28820ce6e/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/dbca458703134cf5b2631d32f34f20a2...99eaab2223274784bca6d4ca114e84a8/)
   [Scheduled] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/2e7e0fc2d0f44480ababbceee06580f0...5a4a90989e074c38b56a6faaa4d8074a/)
   


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152197


   Benchmark runs are scheduled for baseline = 78c88a9f517b540ea010a6bd6a8c8f6d91769559 and contender = 8c8f05783b9282a4d5c76be971cbb5e479811499. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Failed :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9e3420617f0d41679b3fc26c9fa3b814...f3c3c436e0f141839e96f513be9abce3/)
   [Finished :arrow_down:0.0% :arrow_up:40.0%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/e76411e0d6e14bac94541c292ce1b50a...cc398b1f047840b2af7186b28820ce6e/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/dbca458703134cf5b2631d32f34f20a2...99eaab2223274784bca6d4ca114e84a8/)
   [Scheduled] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/2e7e0fc2d0f44480ababbceee06580f0...5a4a90989e074c38b56a6faaa4d8074a/)
   


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152197


   Benchmark runs are scheduled for baseline = 78c88a9f517b540ea010a6bd6a8c8f6d91769559 and contender = 8c8f05783b9282a4d5c76be971cbb5e479811499. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Scheduled] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9e3420617f0d41679b3fc26c9fa3b814...f3c3c436e0f141839e96f513be9abce3/)
   [Finished :arrow_down:0.0% :arrow_up:40.0%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/e76411e0d6e14bac94541c292ce1b50a...cc398b1f047840b2af7186b28820ce6e/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/dbca458703134cf5b2631d32f34f20a2...99eaab2223274784bca6d4ca114e84a8/)
   [Scheduled] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/2e7e0fc2d0f44480ababbceee06580f0...5a4a90989e074c38b56a6faaa4d8074a/)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-875927861


   @westonpace any thoughts on this? It seems to have only a small benefit at best, so maybe we should just close this instead.


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847979229


   Benchmark runs are scheduled for baseline = 5790a80396fc39232cd66669d09c9cbd594ba6cb and contender = a817f124f58517dec53860adc2cceb9b8cf73588. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Failed :arrow_down:0.0% :arrow_up:33.33%] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/b89d80b242604123a4177e57bb0e27d9...5191a35934184148add49ae056ee2533/)
   [Finished :arrow_down:0.0% :arrow_up:33.33%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9bea11e4fa6a4d309600d5b8cbd26de6...67330c8e99244e3187c142b7c4f6fdd4/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/fa3ec70721264c24b0d878fa43cbb578...2bd2f779c9a54a6faeaa8321766e6a72/)
   [Skipped :warning: Only ['C++'] langs are supported on ursa-thinkcentre-m75q] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/93fa20dca6d241bc82badce82ad3f428...7619ceb782734154a3447ce51e9702be/)
   


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[GitHub] [arrow] github-actions[bot] commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
github-actions[bot] commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846103270


   https://issues.apache.org/jira/browse/ARROW-12834


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152098


   @ursabot please benchmark


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847979229


   Benchmark runs are scheduled for baseline = 5790a80396fc39232cd66669d09c9cbd594ba6cb and contender = a817f124f58517dec53860adc2cceb9b8cf73588. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Failed :arrow_down:0.0% :arrow_up:33.33%] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/b89d80b242604123a4177e57bb0e27d9...5191a35934184148add49ae056ee2533/)
   [Finished :arrow_down:0.0% :arrow_up:33.33%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9bea11e4fa6a4d309600d5b8cbd26de6...67330c8e99244e3187c142b7c4f6fdd4/)
   [Finished :arrow_down:1.36% :arrow_up:0.68%] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/fa3ec70721264c24b0d878fa43cbb578...2bd2f779c9a54a6faeaa8321766e6a72/)
   [Skipped :warning: Only ['C++'] langs are supported on ursa-thinkcentre-m75q] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/93fa20dca6d241bc82badce82ad3f428...7619ceb782734154a3447ce51e9702be/)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-848045351


   Conbench does show a marked difference on the i9-9960x though it seems variation is very high for that benchmark anyways when comparing to the contender.


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847979229


   Benchmark runs are scheduled for baseline = 5790a80396fc39232cd66669d09c9cbd594ba6cb and contender = a817f124f58517dec53860adc2cceb9b8cf73588. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Scheduled] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/b89d80b242604123a4177e57bb0e27d9...5191a35934184148add49ae056ee2533/)
   [Finished :arrow_down:0.0% :arrow_up:33.33%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9bea11e4fa6a4d309600d5b8cbd26de6...67330c8e99244e3187c142b7c4f6fdd4/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/fa3ec70721264c24b0d878fa43cbb578...2bd2f779c9a54a6faeaa8321766e6a72/)
   [Skipped :warning: Only ['C++'] langs are supported on ursa-thinkcentre-m75q] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/93fa20dca6d241bc82badce82ad3f428...7619ceb782734154a3447ce51e9702be/)
   


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[GitHub] [arrow] westonpace commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
westonpace commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-875932074


   Unfortunately, I think I agree with closing.  The "common" path for IPC is hot-in-memory reads so the actual "read" calls should be more or less a no-op.  S3/IPC is also probably a pretty uncommon path.  For non-S3 the kernel should be doing its own coalescing.  Maybe the reason there isn't much benefit is because IPC is always doing a full read of the file so there are no real gaps.  Though if we want to start optimizing for partial reads I think there is more we'd have to do than just coalesce.
   
   So maybe a "close, but reopen and investigate further if there is a compelling use case".


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152197


   Benchmark runs are scheduled for baseline = 78c88a9f517b540ea010a6bd6a8c8f6d91769559 and contender = 8c8f05783b9282a4d5c76be971cbb5e479811499. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Failed :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9e3420617f0d41679b3fc26c9fa3b814...f3c3c436e0f141839e96f513be9abce3/)
   [Finished :arrow_down:0.0% :arrow_up:40.0%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/e76411e0d6e14bac94541c292ce1b50a...cc398b1f047840b2af7186b28820ce6e/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/dbca458703134cf5b2631d32f34f20a2...99eaab2223274784bca6d4ca114e84a8/)
   [Finished :arrow_down:2.15% :arrow_up:2.05%] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/2e7e0fc2d0f44480ababbceee06580f0...5a4a90989e074c38b56a6faaa4d8074a/)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847978195


   Running on EC2 with more iterations, it seems there's a small benefit, with some variance (from EC2?) throwing it off.
   
   Conbench for `pre_buffer=True`:
   
   ```
       "stats": {
           "batch_id": "3104564f6b8244fb814465fbbf6a19cb",
           "data": [
               "14.430056",
               "16.669666",
               "38.752780",
               "15.887550",
               "12.784942",
               "13.485059",
               "12.358206",
               "12.877868",
               "11.940915",
               "12.250891"
           ],
           "iqr": "3.058287",
           "iterations": 10,
           "max": "38.752780",
           "mean": "16.143793",
           "median": "13.181464",
           "min": "11.940915",
           "q1": "12.464890",
           "q3": "15.523177",
           "run_id": "3104564f6b8244fb814465fbbf6a19cb",
           "stdev": "8.100836",
           "time_unit": "s",
           "times": [],
           "timestamp": "2021-05-25T15:32:39.462551+00:00",
           "unit": "s"
       },
   ```
   
   Conbench for `pre_buffer=False`:
   ```
       "stats": {
           "batch_id": "e09c0ea9372145ca81aab93f30c08940",
           "data": [
               "15.748755",
               "15.441451",
               "15.636802",
               "15.699552",
               "15.200788",
               "14.816090",
               "14.998590",
               "14.502809",
               "15.451343",
               "15.484191"
           ],
           "iqr": "0.549510",
           "iterations": 10,
           "max": "15.748755",
           "mean": "15.298037",
           "median": "15.446397",
           "min": "14.502809",
           "q1": "15.049140",
           "q3": "15.598650",
           "run_id": "e09c0ea9372145ca81aab93f30c08940",
           "stdev": "0.411182",
           "time_unit": "s",
           "times": [],
           "timestamp": "2021-05-25T15:36:19.423906+00:00",
           "unit": "s"
       },
   ```


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846219969


   Hmm. It's unclear if there's an improvement. Nominally there is compared to the contender but it seems the contender was just slow. I was hoping the pre_buffer=true would be faster than the pre_buffer=false within the same run.
   
   ![image](https://user-images.githubusercontent.com/327919/119191665-f542ab00-ba4c-11eb-8b41-a899fb4c4b6c.png)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152596


   Oh no, I forgot to scope it to just Python :(


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847979109


   @ursabot please benchmark lang=Python


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[GitHub] [arrow] lidavidm closed pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm closed pull request #10376:
URL: https://github.com/apache/arrow/pull/10376


   


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[GitHub] [arrow] ursabot edited a comment on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot edited a comment on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846152197


   Benchmark runs are scheduled for baseline = 78c88a9f517b540ea010a6bd6a8c8f6d91769559 and contender = 8c8f05783b9282a4d5c76be971cbb5e479811499. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Failed :arrow_down:0.0% :arrow_up:0.0%] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9e3420617f0d41679b3fc26c9fa3b814...f3c3c436e0f141839e96f513be9abce3/)
   [Finished :arrow_down:0.0% :arrow_up:40.0%] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/e76411e0d6e14bac94541c292ce1b50a...cc398b1f047840b2af7186b28820ce6e/)
   [Finished :arrow_down:0.71% :arrow_up:1.43%] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/dbca458703134cf5b2631d32f34f20a2...99eaab2223274784bca6d4ca114e84a8/)
   [Finished :arrow_down:2.15% :arrow_up:2.05%] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/2e7e0fc2d0f44480ababbceee06580f0...5a4a90989e074c38b56a6faaa4d8074a/)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-846097278


   See https://github.com/ursacomputing/benchmarks/pull/45 for the accompanying benchmark.


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[GitHub] [arrow] ursabot commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
ursabot commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847979229


   Benchmark runs are scheduled for baseline = 5790a80396fc39232cd66669d09c9cbd594ba6cb and contender = a817f124f58517dec53860adc2cceb9b8cf73588. Results will be available as each benchmark for each run completes.
   Conbench compare runs links:
   [Scheduled] [ec2-t3-large-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/b89d80b242604123a4177e57bb0e27d9...5191a35934184148add49ae056ee2533/)
   [Scheduled] [ec2-t3-xlarge-us-east-2 (mimalloc)](https://conbench.ursa.dev/compare/runs/9bea11e4fa6a4d309600d5b8cbd26de6...67330c8e99244e3187c142b7c4f6fdd4/)
   [Scheduled] [ursa-i9-9960x (mimalloc)](https://conbench.ursa.dev/compare/runs/fa3ec70721264c24b0d878fa43cbb578...2bd2f779c9a54a6faeaa8321766e6a72/)
   [Skipped :warning: Only ['C++'] langs are supported on ursa-thinkcentre-m75q] [ursa-thinkcentre-m75q (mimalloc)](https://conbench.ursa.dev/compare/runs/93fa20dca6d241bc82badce82ad3f428...7619ceb782734154a3447ce51e9702be/)
   


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-875933569


   Makes sense. I would also guess that record batches are also generally large enough that there's no need for further coalescing, unlike Parquet where the column-chunk granularity makes coalescing a highly effective optimization.


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[GitHub] [arrow] lidavidm commented on pull request #10376: ARROW-12834: [Python] Expose pre_buffer for IPC fragments

Posted by GitBox <gi...@apache.org>.
lidavidm commented on pull request #10376:
URL: https://github.com/apache/arrow/pull/10376#issuecomment-847102241


   I'd like to test this myself on EC2 and see why we don't get any expected benefit.


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