You are viewing a plain text version of this content. The canonical link for it is here.
Posted to issues@spark.apache.org by "Liang-Chi Hsieh (JIRA)" <ji...@apache.org> on 2019/04/04 10:37:00 UTC
[jira] [Commented] (SPARK-27375) cache not working after
discretizer.fit(df).transform(df)
[ https://issues.apache.org/jira/browse/SPARK-27375?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16809704#comment-16809704 ]
Liang-Chi Hsieh commented on SPARK-27375:
-----------------------------------------
This is the physical plan when using current master branch:
{code}
>>> df1.join(df2, "id").explain()
== Physical Plan ==
*(2) Project [id#0L, quantileNo#11, r1#35, quantileNo#43, r2#39]
+- *(2) BroadcastHashJoin [id#0L], [id#45L], Inner, BuildRight
:- *(2) Project [id#0L, quantileNo#11, r#15 AS r1#35]
: +- *(2) InMemoryTableScan [id#0L, quantileNo#11, r#15]
: +- InMemoryRelation [id#0L, quantileNo#11, r#15], StorageLevel(disk, memory, deserialized, 1 replicas)
: +- *(2) Project [id#0L, UDF:bucketizer_0(cast(id#0L as double)) AS quantileNo#11, pythonUDF0#19 AS r#15]
: +- BatchEvalPython [ri()], [id#0L, pythonUDF0#19]
: +- Exchange hashpartitioning(id#0L, 200)
: +- *(1) Range (0, 100, step=1, splits=12)
+- BroadcastExchange HashedRelationBroadcastMode(List(input[0, bigint, false]))
+- *(1) Project [id#45L, quantileNo#43, r#15 AS r2#39]
+- *(1) InMemoryTableScan [id#45L, quantileNo#43, r#15]
+- InMemoryRelation [id#45L, quantileNo#43, r#15], StorageLevel(disk, memory, deserialized, 1 replicas)
+- *(2) Project [id#0L, UDF:bucketizer_0(cast(id#0L as double)) AS quantileNo#11, pythonUDF0#19 AS r#15]
+- BatchEvalPython [ri()], [id#0L, pythonUDF0#19]
+- Exchange hashpartitioning(id#0L, 200)
+- *(1) Range (0, 100, step=1, splits=12)
{code}
I think that the caching is working. Is this issue specific to 2.3.0 only? Have you tried on newer versions like 2.4?
> cache not working after discretizer.fit(df).transform(df)
> ---------------------------------------------------------
>
> Key: SPARK-27375
> URL: https://issues.apache.org/jira/browse/SPARK-27375
> Project: Spark
> Issue Type: Bug
> Components: Examples
> Affects Versions: 2.3.0
> Reporter: Zhenyi Lin
> Priority: Major
>
> Below gives an example.
> If cache works, col(r1) should be equal to col(r2) in the output dfj.show(). However, after using discretizer fit and transform DF, col(r1) and col(r2) are different.
>
> {noformat}
> spark.catalog.clearCache()
> import random
> random.seed(123)
> @udf(IntegerType())
> def ri():
> return random.choice([1,2,3,4,5,6,7,8,9])
> df = spark.range(100).repartition("id")
> #remove discretizer part, col(r1) will be equal to col(r2)
> discretizer = QuantileDiscretizer(numBuckets=3, inputCol="id", outputCol="quantileNo")
> df = discretizer.fit(df).transform(df)
> # if we add following 1 line copy df, col(r1) will also become equal to col(r2)
> # df = df.rdd.toDF()
> df = df.withColumn("r", ri()).cache()
> df1 = df.withColumnRenamed("r", "r1")
> df2 = df.withColumnRenamed("r", "r2")
> df1.join(df2, "id").explain()
> dfj = df1.join(df2, "id")
> dfj.select("id", "r1", "r2").show(5)
>
> The result is shown as below, we see that col(r1) and col(r2) are different.
> The physical plan shows that the cache() is missed in join operation.
> To avoid it, I either add df = df.rdd.toDF() before creating df1 and df2, or if we remove discretizer fit and transformation, col(r1) and col(r2) become identical.
>
> == Physical Plan ==
> *(4) Project [id#15612L, quantileNo#15622, r1#15645, quantileNo#15653, r2#15649]
> +- *(4) BroadcastHashJoin [id#15612L], [id#15655L], Inner, BuildRight
> :- *(4) Project [id#15612L, UDF:bucketizer_0(cast(id#15612L as double)) AS quantileNo#15622, pythonUDF0#15661 AS r1#15645]
> : +- BatchEvalPython [ri()], [id#15612L, pythonUDF0#15661]
> : +- Exchange hashpartitioning(id#15612L, 24)
> : +- *(1) Range (0, 100, step=1, splits=6)
> +- BroadcastExchange HashedRelationBroadcastMode(List(input[0, bigint, false]))
> +- *(3) Project [id#15655L, UDF:bucketizer_0(cast(id#15655L as double)) AS quantileNo#15653, pythonUDF0#15662 AS r2#15649]
> +- BatchEvalPython [ri()], [id#15655L, pythonUDF0#15662]
> +- ReusedExchange [id#15655L], Exchange hashpartitioning(id#15612L, 24)
> +---+---+---+
> | id| r1| r2|
> +---+---+---+
> | 28| 9| 3|
> | 30| 3| 6|
> | 88| 1| 9|
> | 67| 3| 3|
> | 66| 1| 5|
> +---+---+---+
> only showing top 5 rows
>
> {noformat}
>
--
This message was sent by Atlassian JIRA
(v7.6.3#76005)
---------------------------------------------------------------------
To unsubscribe, e-mail: issues-unsubscribe@spark.apache.org
For additional commands, e-mail: issues-help@spark.apache.org