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Posted to issues@spark.apache.org by "Herman van Hovell (JIRA)" <ji...@apache.org> on 2016/06/08 03:20:20 UTC
[jira] [Closed] (SPARK-15755) java.lang.NullPointerException when
run spark 2.0 setting
spark.serializer=org.apache.spark.serializer.KryoSerializer
[ https://issues.apache.org/jira/browse/SPARK-15755?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Herman van Hovell closed SPARK-15755.
-------------------------------------
Resolution: Duplicate
> java.lang.NullPointerException when run spark 2.0 setting spark.serializer=org.apache.spark.serializer.KryoSerializer
> ---------------------------------------------------------------------------------------------------------------------
>
> Key: SPARK-15755
> URL: https://issues.apache.org/jira/browse/SPARK-15755
> Project: Spark
> Issue Type: Bug
> Affects Versions: 2.0.0
> Reporter: marymwu
>
> java.lang.NullPointerException when run spark 2.0 setting spark.serializer=org.apache.spark.serializer.KryoSerializer
> 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result
> com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException
> Serialization trace:
> underlying (org.apache.spark.util.BoundedPriorityQueue)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144)
> at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312)
> at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.NullPointerException
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157)
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148)
> at scala.math.Ordering$$anon$4.compare(Ordering.scala:111)
> at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649)
> at java.util.PriorityQueue.siftUp(PriorityQueue.java:627)
> at java.util.PriorityQueue.offer(PriorityQueue.java:329)
> at java.util.PriorityQueue.add(PriorityQueue.java:306)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31)
> at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125)
> ... 15 more
> 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result
> com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException
> Serialization trace:
> underlying (org.apache.spark.util.BoundedPriorityQueue)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144)
> at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312)
> at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.NullPointerException
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157)
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148)
> at scala.math.Ordering$$anon$4.compare(Ordering.scala:111)
> at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649)
> at java.util.PriorityQueue.siftUp(PriorityQueue.java:627)
> at java.util.PriorityQueue.offer(PriorityQueue.java:329)
> at java.util.PriorityQueue.add(PriorityQueue.java:306)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31)
> at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125)
> ... 15 more
> 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result
> com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException
> Serialization trace:
> underlying (org.apache.spark.util.BoundedPriorityQueue)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144)
> at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312)
> at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.NullPointerException
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157)
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148)
> at scala.math.Ordering$$anon$4.compare(Ordering.scala:111)
> at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649)
> at java.util.PriorityQueue.siftUp(PriorityQueue.java:627)
> at java.util.PriorityQueue.offer(PriorityQueue.java:329)
> at java.util.PriorityQueue.add(PriorityQueue.java:306)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31)
> at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125)
> ... 15 more
> 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result
> com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException
> Serialization trace:
> underlying (org.apache.spark.util.BoundedPriorityQueue)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144)
> at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25)
> at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19)
> at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793)
> at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312)
> at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57)
> at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793)
> at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.NullPointerException
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157)
> at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148)
> at scala.math.Ordering$$anon$4.compare(Ordering.scala:111)
> at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649)
> at java.util.PriorityQueue.siftUp(PriorityQueue.java:627)
> at java.util.PriorityQueue.offer(PriorityQueue.java:329)
> at java.util.PriorityQueue.add(PriorityQueue.java:306)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78)
> at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31)
> at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711)
> at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125)
> ... 15 more
> 16/05/27 15:15:28 INFO YarnScheduler: Cancelling stage 6
> 16/05/27 15:15:28 INFO YarnScheduler: Stage 6 was cancelled
> 16/05/27 15:15:28 INFO DAGScheduler: ResultStage 6 (run at AccessController.java:-2) failed in 1.075 s
> 16/05/27 15:15:28 WARN ExecutorAllocationManager: No stages are running, but numRunningTasks != 0
> 16/05/27 15:15:28 INFO DAGScheduler: Job 4 failed: run at AccessController.java:-2, took 14.847507 s
> 16/05/27 15:15:28 ERROR SparkExecuteStatementOperation: Error executing query, currentState RUNNING,
> org.apache.spark.SparkException: Job aborted due to stage failure: Exception while getting task result: com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException
> Serialization trace:
> underlying (org.apache.spark.util.BoundedPriorityQueue)
> at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1450)
> at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1438)
> at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1437)
> at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
> at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
> at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1437)
> at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:811)
> at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:811)
> at scala.Option.foreach(Option.scala:257)
> at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:811)
> at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1659)
> at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1618)
> at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1607)
> at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
> at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:632)
> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1863)
> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1926)
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