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Posted to dev@commons.apache.org by "Continuum@vmbuild" <de...@commons.apache.org> on 2012/08/15 05:41:23 UTC
[continuum] BUILD FAILURE: Apache Commons - Commons Math -
Group (shared) Maven 2 Build Definition (Java 1.5)
MIME-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
X-Continuum-Build-Host: vmbuild
X-Continuum-Project-Id: 97
X-Continuum-Project-Name: Commons Math
Online report : http://vmbuild.apache.org/continuum/buildResult.action?buildId=24596&projectId=97
Build statistics:
State: Failed
Previous State: Ok
Started at: Wed 15 Aug 2012 03:35:33 +0000
Finished at: Wed 15 Aug 2012 03:41:20 +0000
Total time: 5m 47s
Build Trigger: Schedule
Build Number: 915
Exit code: 1
Building machine hostname: vmbuild
Operating system : Linux(unknown)
Java Home version :
java version "1.6.0_30"
Java(TM) SE Runtime Environment (build 1.6.0_30-b12)
Java HotSpot(TM) 64-Bit Server VM (build 20.5-b03, mixed mode)
Builder version :
Apache Maven 2.2.1 (r801777; 2009-08-06 19:16:01+0000)
Java version: 1.6.0_30
Java home: /usr/lib/jvm/jdk1.6.0_30/jre
Default locale: en_AU, platform encoding: UTF-8
OS name: "linux" version: "2.6.32-31-server" arch: "amd64" Family: "unix"
****************************************************************************
SCM Changes:
****************************************************************************
Changed: sebb @ Tue 7 Aug 2012 12:38:06 +0000
Comment: Javadoc syntax
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/genetics/CycleCrossover.java ( 1370211 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/genetics/OrderedCrossover.java ( 1370211 )
Changed: sebb @ Tue 7 Aug 2012 12:38:39 +0000
Comment: Javadoc syntax
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/special/Gamma.java ( 1370214 )
Changed: sebb @ Tue 7 Aug 2012 12:38:59 +0000
Comment: Missing @Deprecated
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractIntegerDistribution.java ( 1370215 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractRealDistribution.java ( 1370215 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/GammaDistribution.java ( 1370215 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/AbstractConvergenceChecker.java ( 1370215 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/fitting/PolynomialFitter.java ( 1370215 )
Changed: sebb @ Tue 7 Aug 2012 12:39:29 +0000
Comment: Unused imports
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/CurveFitterTest.java ( 1370217 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/AbstractLeastSquaresOptimizerTestValidation.java ( 1370217 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/CircleProblem.java ( 1370217 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/RandomStraightLinePointGenerator.java ( 1370217 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/StraightLineProblem.java ( 1370217 )
Changed: sebb @ Tue 7 Aug 2012 12:40:56 +0000
Comment: Missing @Deprecated
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/linear/EigenDecomposition.java ( 1370219 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/general/AbstractLeastSquaresOptimizer.java ( 1370219 )
Changed: sebb @ Tue 7 Aug 2012 12:42:33 +0000
Comment: Raw types
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/CurveFitterTest.java ( 1370220 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/PolynomialFitterTest.java ( 1370220 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/univariate/BrentOptimizerTest.java ( 1370220 )
Changed: sebb @ Tue 7 Aug 2012 12:43:41 +0000
Comment: Javadoc fixes (not thrown)
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/PoissonDistributionTest.java ( 1370224 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/stat/descriptive/AggregateSummaryStatisticsTest.java ( 1370224 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/stat/regression/OLSMultipleLinearRegressionTest.java ( 1370224 )
Changed: sebb @ Tue 7 Aug 2012 12:48:25 +0000
Comment: MIssing @Override
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/fitting/GaussianFitter.java ( 1370227 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/AbstractRealDistributionTest.java ( 1370227 )
Changed: sebb @ Tue 7 Aug 2012 12:49:31 +0000
Comment: MIssing @Override
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/direct/BaseAbstractMultivariateSimpleBoundsOptimizer.java ( 1370228 )
Changed: erans @ Tue 7 Aug 2012 21:38:58 +0000
Comment: MATH-843
Corrected documentation for "Precision.EPSILON".
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/Precision.java ( 1370547 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/PrecisionTest.java ( 1370547 )
Changed: erans @ Wed 8 Aug 2012 14:18:16 +0000
Comment: MATH-815
Initial commit. Units test are yet to be added. This version also
contains a bug. Code contributed by Jared Becksfort, included with
modifications. [Cf. comments on JIRA.]
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractMultivariateRealDistribution.java ( 1370782 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1370782 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateRealDistribution.java ( 1370782 )
Changed: luc @ Wed 8 Aug 2012 20:33:43 +0000
Comment: Added a new package dealing with differentials.
The package is intended to deals with one or more free parameters and
derivation order 1 or higher.
The core elements are based on Dan Kalman paper "Recursive Multivariate
Automatic Differentiation", Mathematics Magazine, vol. 75, no. 3, June
2002. For efficiency, the recursive structure is compiled as simple
loops once for each pair (number of free parameters, derivation order).
This is work in progress, there are still some features missing even in
the most basic blocks (typically the asin, acos, atan, atant2 and taylor
methods in DSCompiler). There are also still no high level
differentiator implementation.
Files changed:
/commons/proper/math/trunk/src/changes/changes.xml ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/UnivariateDifferential.java ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/UnivariateDifferentiator.java ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/package-info.java ( 1370951 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1370951 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation ( 1370951 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DSCompilerTest.java ( 1370951 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1370951 )
Changed: erans @ Wed 8 Aug 2012 21:52:22 +0000
Comment: MATH-815
Code update. Unit test.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1370984 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/MultivariateNormalDistributionTest.java ( 1370984 )
Changed: luc @ Thu 9 Aug 2012 07:54:06 +0000
Comment: partially reverted commit 1370951 as it trashed earlier correction in FastMath
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371073 )
Changed: luc @ Thu 9 Aug 2012 08:07:25 +0000
Comment: added a function to raise a double to an int power
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371082 )
Changed: erans @ Thu 9 Aug 2012 11:40:01 +0000
Comment: Unit test for "FastMath.pow(double,int)".
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/FastMathTest.java ( 1371170 )
Changed: erans @ Thu 9 Aug 2012 15:55:18 +0000
Comment: Code and javadoc cleanup.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/direct/PowellOptimizer.java ( 1371264 )
Changed: luc @ Fri 10 Aug 2012 11:54:46 +0000
Comment: Fixed accuracy issues in FastMath.pow(double, int).
The fixed version is slightly slower, but still much faster than
FastMath.pow(double, double). Some random testing showed that the
accuracy is now always better than 0.5ulp, even for large exponent.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371670 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/FastMathTest.java ( 1371670 )
Changed: luc @ Fri 10 Aug 2012 11:59:20 +0000
Comment: Forward the underlying error message when an exception is triggered.
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/PerfTestUtils.java ( 1371671 )
Changed: luc @ Fri 10 Aug 2012 12:15:23 +0000
Comment: Added Stirling numbers of the second kind in ArithmeticUtils.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/ArithmeticUtils.java ( 1371680 )
/commons/proper/math/trunk/src/site/xdoc/userguide/index.xml ( 1371680 )
/commons/proper/math/trunk/src/site/xdoc/userguide/utilities.xml ( 1371680 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/ArithmeticUtilsTest.java ( 1371680 )
Changed: luc @ Fri 10 Aug 2012 12:18:12 +0000
Comment: New test for sin and cos derivatives.
Files changed:
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371681 )
Changed: luc @ Fri 10 Aug 2012 12:19:48 +0000
Comment: Added forgotten notification of recent changes.
Files changed:
/commons/proper/math/trunk/src/changes/changes.xml ( 1371683 )
Changed: luc @ Fri 10 Aug 2012 18:33:06 +0000
Comment: Completed support fo asin, acos and atan in DSCompiler.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1371805 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371805 )
Changed: luc @ Fri 10 Aug 2012 18:58:58 +0000
Comment: Added support for x^y in DerivativeStructure and DSCompiler.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1371808 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1371808 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371808 )
Changed: erans @ Sun 12 Aug 2012 21:22:58 +0000
Comment: Code cleanup.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1372199 )
Changed: erans @ Sun 12 Aug 2012 22:55:34 +0000
Comment: Fixed CheckStyle warnings.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractMultivariateRealDistribution.java ( 1372208 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1372208 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateRealDistribution.java ( 1372208 )
Changed: luc @ Mon 13 Aug 2012 13:06:26 +0000
Comment: Added support for atan2 in DSCompiler.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372414 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372414 )
Changed: luc @ Mon 13 Aug 2012 14:14:17 +0000
Comment: Added Taylor expansion for DSCompiler.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372432 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1372432 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372432 )
Changed: erans @ Mon 13 Aug 2012 19:14:00 +0000
Comment: MATH-815
Unit test update (patch provided by Jared Becksfort).
Files changed:
/commons/proper/math/trunk/src/changes/changes.xml ( 1372556 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/MultivariateNormalDistributionTest.java ( 1372556 )
Changed: luc @ Tue 14 Aug 2012 09:45:36 +0000
Comment: Simplified tangent higher derivatives computation.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372812 )
Changed: luc @ Tue 14 Aug 2012 14:25:50 +0000
Comment: Added hyperbolic trigonometric functions and inverses to DSCompiler.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372902 )
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1372902 )
/commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372902 )
Changed: tn @ Tue 14 Aug 2012 18:50:53 +0000
Comment: Javadoc fixes.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/CompositeFormat.java ( 1373026 )
Changed: erans @ Tue 14 Aug 2012 22:02:06 +0000
Comment: Fixed FindBugs warning.
Files changed:
/commons/proper/math/trunk/src/main/java/org/apache/commons/math3/linear/EigenDecomposition.java ( 1373134 )
****************************************************************************
Dependencies Changes:
****************************************************************************
No dependencies changed
****************************************************************************
Build Definition:
****************************************************************************
POM filename: pom.xml
Goals: clean deploy
Arguments: --batch-mode -Pjava-1.5 -Dgpg.skip -Prelease
Build Fresh: false
Always Build: false
Default Build Definition: true
Schedule: COMMONS_SCHEDULE
Profile Name: Maven 2.2.1
Description: Group (shared) Maven 2 Build Definition (Java 1.5)
****************************************************************************
Test Summary:
****************************************************************************
Tests: 4057
Failures: 1
Errors: 0
Success Rate: 99
Total time: 282.23117
****************************************************************************
Test Failures:
****************************************************************************
EigenDecompositionTest
testNormalDistributionUnsymmetricMatrix :
java.lang.AssertionError
java.lang.AssertionError: The norm of (X-Y) is too large
at org.junit.Assert.fail(Assert.java:93)
at org.junit.Assert.assertTrue(Assert.java:43)
at org.apache.commons.math3.linear.EigenDecompositionTest.checkUnsymmetricMatrix(EigenDecompositionTest.java:422)
at org.apache.commons.math3.linear.EigenDecompositionTest.testNormalDistributionUnsymmetricMatrix(EigenDecompositionTest.java:404)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:592)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30)
at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222)
at org.junit.runners.ParentRunner.run(ParentRunner.java:300)
at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:236)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:134)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:113)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:592)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165)
at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85)
at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:103)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:74)
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Re: [continuum] BUILD FAILURE: Apache Commons - Commons Math -
Posted by Thomas Neidhart <th...@gmail.com>.
On 08/15/2012 05:41 AM, Continuum@vmbuild wrote:
> Group (shared) Maven 2 Build Definition (Java 1.5)
> MIME-Version: 1.0
> Content-Type: text/plain; charset=us-ascii
> Content-Transfer-Encoding: 7bit
> X-Continuum-Build-Host: vmbuild
> X-Continuum-Project-Id: 97
> X-Continuum-Project-Name: Commons Math
>
> Online report : http://vmbuild.apache.org/continuum/buildResult.action?buildId=24596&projectId=97
>
> Build statistics:
> State: Failed
> Previous State: Ok
> Started at: Wed 15 Aug 2012 03:35:33 +0000
> Finished at: Wed 15 Aug 2012 03:41:20 +0000
> Total time: 5m 47s
> Build Trigger: Schedule
> Build Number: 915
> Exit code: 1
> Building machine hostname: vmbuild
> Operating system : Linux(unknown)
> Java Home version :
> java version "1.6.0_30"
> Java(TM) SE Runtime Environment (build 1.6.0_30-b12)
> Java HotSpot(TM) 64-Bit Server VM (build 20.5-b03, mixed mode)
>
> Builder version :
> Apache Maven 2.2.1 (r801777; 2009-08-06 19:16:01+0000)
> Java version: 1.6.0_30
> Java home: /usr/lib/jvm/jdk1.6.0_30/jre
> Default locale: en_AU, platform encoding: UTF-8
> OS name: "linux" version: "2.6.32-31-server" arch: "amd64" Family: "unix"
>
> ****************************************************************************
> SCM Changes:
> ****************************************************************************
> Changed: sebb @ Tue 7 Aug 2012 12:38:06 +0000
> Comment: Javadoc syntax
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/genetics/CycleCrossover.java ( 1370211 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/genetics/OrderedCrossover.java ( 1370211 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:38:39 +0000
> Comment: Javadoc syntax
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/special/Gamma.java ( 1370214 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:38:59 +0000
> Comment: Missing @Deprecated
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractIntegerDistribution.java ( 1370215 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractRealDistribution.java ( 1370215 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/GammaDistribution.java ( 1370215 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/AbstractConvergenceChecker.java ( 1370215 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/fitting/PolynomialFitter.java ( 1370215 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:39:29 +0000
> Comment: Unused imports
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/CurveFitterTest.java ( 1370217 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/AbstractLeastSquaresOptimizerTestValidation.java ( 1370217 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/CircleProblem.java ( 1370217 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/RandomStraightLinePointGenerator.java ( 1370217 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/general/StraightLineProblem.java ( 1370217 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:40:56 +0000
> Comment: Missing @Deprecated
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/linear/EigenDecomposition.java ( 1370219 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/general/AbstractLeastSquaresOptimizer.java ( 1370219 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:42:33 +0000
> Comment: Raw types
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/CurveFitterTest.java ( 1370220 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/fitting/PolynomialFitterTest.java ( 1370220 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/optimization/univariate/BrentOptimizerTest.java ( 1370220 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:43:41 +0000
> Comment: Javadoc fixes (not thrown)
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/PoissonDistributionTest.java ( 1370224 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/stat/descriptive/AggregateSummaryStatisticsTest.java ( 1370224 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/stat/regression/OLSMultipleLinearRegressionTest.java ( 1370224 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:48:25 +0000
> Comment: MIssing @Override
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/fitting/GaussianFitter.java ( 1370227 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/AbstractRealDistributionTest.java ( 1370227 )
>
> Changed: sebb @ Tue 7 Aug 2012 12:49:31 +0000
> Comment: MIssing @Override
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/direct/BaseAbstractMultivariateSimpleBoundsOptimizer.java ( 1370228 )
>
> Changed: erans @ Tue 7 Aug 2012 21:38:58 +0000
> Comment: MATH-843
> Corrected documentation for "Precision.EPSILON".
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/Precision.java ( 1370547 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/PrecisionTest.java ( 1370547 )
>
> Changed: erans @ Wed 8 Aug 2012 14:18:16 +0000
> Comment: MATH-815
> Initial commit. Units test are yet to be added. This version also
> contains a bug. Code contributed by Jared Becksfort, included with
> modifications. [Cf. comments on JIRA.]
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractMultivariateRealDistribution.java ( 1370782 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1370782 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateRealDistribution.java ( 1370782 )
>
> Changed: luc @ Wed 8 Aug 2012 20:33:43 +0000
> Comment: Added a new package dealing with differentials.
>
> The package is intended to deals with one or more free parameters and
> derivation order 1 or higher.
>
> The core elements are based on Dan Kalman paper "Recursive Multivariate
> Automatic Differentiation", Mathematics Magazine, vol. 75, no. 3, June
> 2002. For efficiency, the recursive structure is compiled as simple
> loops once for each pair (number of free parameters, derivation order).
>
> This is work in progress, there are still some features missing even in
> the most basic blocks (typically the asin, acos, atan, atant2 and taylor
> methods in DSCompiler). There are also still no high level
> differentiator implementation.
> Files changed:
> /commons/proper/math/trunk/src/changes/changes.xml ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/UnivariateDifferential.java ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/UnivariateDifferentiator.java ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/package-info.java ( 1370951 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1370951 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation ( 1370951 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DSCompilerTest.java ( 1370951 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1370951 )
>
> Changed: erans @ Wed 8 Aug 2012 21:52:22 +0000
> Comment: MATH-815
> Code update. Unit test.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1370984 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/MultivariateNormalDistributionTest.java ( 1370984 )
>
> Changed: luc @ Thu 9 Aug 2012 07:54:06 +0000
> Comment: partially reverted commit 1370951 as it trashed earlier correction in FastMath
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371073 )
>
> Changed: luc @ Thu 9 Aug 2012 08:07:25 +0000
> Comment: added a function to raise a double to an int power
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371082 )
>
> Changed: erans @ Thu 9 Aug 2012 11:40:01 +0000
> Comment: Unit test for "FastMath.pow(double,int)".
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/FastMathTest.java ( 1371170 )
>
> Changed: erans @ Thu 9 Aug 2012 15:55:18 +0000
> Comment: Code and javadoc cleanup.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/optimization/direct/PowellOptimizer.java ( 1371264 )
>
> Changed: luc @ Fri 10 Aug 2012 11:54:46 +0000
> Comment: Fixed accuracy issues in FastMath.pow(double, int).
>
> The fixed version is slightly slower, but still much faster than
> FastMath.pow(double, double). Some random testing showed that the
> accuracy is now always better than 0.5ulp, even for large exponent.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1371670 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/FastMathTest.java ( 1371670 )
>
> Changed: luc @ Fri 10 Aug 2012 11:59:20 +0000
> Comment: Forward the underlying error message when an exception is triggered.
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/PerfTestUtils.java ( 1371671 )
>
> Changed: luc @ Fri 10 Aug 2012 12:15:23 +0000
> Comment: Added Stirling numbers of the second kind in ArithmeticUtils.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/ArithmeticUtils.java ( 1371680 )
> /commons/proper/math/trunk/src/site/xdoc/userguide/index.xml ( 1371680 )
> /commons/proper/math/trunk/src/site/xdoc/userguide/utilities.xml ( 1371680 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/util/ArithmeticUtilsTest.java ( 1371680 )
>
> Changed: luc @ Fri 10 Aug 2012 12:18:12 +0000
> Comment: New test for sin and cos derivatives.
> Files changed:
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371681 )
>
> Changed: luc @ Fri 10 Aug 2012 12:19:48 +0000
> Comment: Added forgotten notification of recent changes.
> Files changed:
> /commons/proper/math/trunk/src/changes/changes.xml ( 1371683 )
>
> Changed: luc @ Fri 10 Aug 2012 18:33:06 +0000
> Comment: Completed support fo asin, acos and atan in DSCompiler.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1371805 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371805 )
>
> Changed: luc @ Fri 10 Aug 2012 18:58:58 +0000
> Comment: Added support for x^y in DerivativeStructure and DSCompiler.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1371808 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1371808 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1371808 )
>
> Changed: erans @ Sun 12 Aug 2012 21:22:58 +0000
> Comment: Code cleanup.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/FastMath.java ( 1372199 )
>
> Changed: erans @ Sun 12 Aug 2012 22:55:34 +0000
> Comment: Fixed CheckStyle warnings.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/AbstractMultivariateRealDistribution.java ( 1372208 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateNormalDistribution.java ( 1372208 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/distribution/MultivariateRealDistribution.java ( 1372208 )
>
> Changed: luc @ Mon 13 Aug 2012 13:06:26 +0000
> Comment: Added support for atan2 in DSCompiler.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372414 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372414 )
>
> Changed: luc @ Mon 13 Aug 2012 14:14:17 +0000
> Comment: Added Taylor expansion for DSCompiler.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372432 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1372432 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372432 )
>
> Changed: erans @ Mon 13 Aug 2012 19:14:00 +0000
> Comment: MATH-815
> Unit test update (patch provided by Jared Becksfort).
> Files changed:
> /commons/proper/math/trunk/src/changes/changes.xml ( 1372556 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/distribution/MultivariateNormalDistributionTest.java ( 1372556 )
>
> Changed: luc @ Tue 14 Aug 2012 09:45:36 +0000
> Comment: Simplified tangent higher derivatives computation.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372812 )
>
> Changed: luc @ Tue 14 Aug 2012 14:25:50 +0000
> Comment: Added hyperbolic trigonometric functions and inverses to DSCompiler.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DSCompiler.java ( 1372902 )
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructure.java ( 1372902 )
> /commons/proper/math/trunk/src/test/java/org/apache/commons/math3/analysis/differentiation/DerivativeStructureTest.java ( 1372902 )
>
> Changed: tn @ Tue 14 Aug 2012 18:50:53 +0000
> Comment: Javadoc fixes.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/util/CompositeFormat.java ( 1373026 )
>
> Changed: erans @ Tue 14 Aug 2012 22:02:06 +0000
> Comment: Fixed FindBugs warning.
> Files changed:
> /commons/proper/math/trunk/src/main/java/org/apache/commons/math3/linear/EigenDecomposition.java ( 1373134 )
>
> ****************************************************************************
> Dependencies Changes:
> ****************************************************************************
> No dependencies changed
>
>
> ****************************************************************************
> Build Definition:
> ****************************************************************************
> POM filename: pom.xml
> Goals: clean deploy
> Arguments: --batch-mode -Pjava-1.5 -Dgpg.skip -Prelease
> Build Fresh: false
> Always Build: false
> Default Build Definition: true
> Schedule: COMMONS_SCHEDULE
> Profile Name: Maven 2.2.1
> Description: Group (shared) Maven 2 Build Definition (Java 1.5)
>
> ****************************************************************************
> Test Summary:
> ****************************************************************************
> Tests: 4057
> Failures: 1
> Errors: 0
> Success Rate: 99
> Total time: 282.23117
>
> ****************************************************************************
> Test Failures:
> ****************************************************************************
>
> EigenDecompositionTest
> testNormalDistributionUnsymmetricMatrix :
> java.lang.AssertionError
> java.lang.AssertionError: The norm of (X-Y) is too large
> at org.junit.Assert.fail(Assert.java:93)
> at org.junit.Assert.assertTrue(Assert.java:43)
> at org.apache.commons.math3.linear.EigenDecompositionTest.checkUnsymmetricMatrix(EigenDecompositionTest.java:422)
> at org.apache.commons.math3.linear.EigenDecompositionTest.testNormalDistributionUnsymmetricMatrix(EigenDecompositionTest.java:404)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:592)
> at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45)
> at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
> at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42)
> at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
> at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
> at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30)
> at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263)
> at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68)
> at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47)
> at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231)
> at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60)
> at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229)
> at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50)
> at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222)
> at org.junit.runners.ParentRunner.run(ParentRunner.java:300)
> at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:236)
> at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:134)
> at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:113)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:592)
> at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189)
> at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165)
> at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85)
> at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:103)
> at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:74)
as already agreed with Gilles, I will remove the random data tests for
EigenvalueDecomposition.
Thomas
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