[jira] [Created] (CTAKES-552) Problems with sno_rx_16ab.xml after patch application

["Kyle Rasku (Jira)" <ji...@apache.org>]

Kyle Rasku created CTAKES-552:
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             Summary: Problems with sno_rx_16ab.xml after patch application
                 Key: CTAKES-552
                 URL: https://issues.apache.org/jira/browse/CTAKES-552
             Project: cTAKES
          Issue Type: Bug
          Components: ctakes-dictionary-lookup
    Affects Versions: 4.0.0.1
         Environment: Windows 10
            Reporter: Kyle Rasku


Hello All,
 
Attempted to download and install the patch version on Windows 10 today.  
 
I tried to run ClinicalPipeline with my API Key (which I have already validated via the UMLS API test site):
 
{{bin\runClinicalPipeline -i C:\Input\MyNotes\ --xmiOut C:\Output\MyNotes\ *--key 00a111b3-4c55-5555-5d66-66e7f888ghij*}}

where{{ 00a111b3-4c55-5555-5d66-66e7f888ghij}} is my _Key_.
 
Got:
 
+*(With just install of 4.0.0.1)*+
 
22 Jan 2021 17:00:07 ERROR FileLocator - Could not find org/apache/ctakes/dictionary/lookup/fast/sno_rx_16ab.xml as absolute or in $CLASSPATH :
 
+*(After attempting to xcopy the 4.0 SourceForge resources directory and re-run)*+
 
22 Jan 2021 16:43:57  INFO AbstractJCasTermAnnotator - Using Dictionary Descriptor: org/apache/ctakes/dictionary/lookup/fast/sno_rx_16ab.xml22 Jan 2021 16:43:57  INFO DictionaryDescriptorParser - Parsing dictionary specifications:
22 Jan 2021 16:43:57  INFO UmlsUserApprover - Checking UMLS Account at [https://utslogin.nlm.nih.gov/cas/v1/api-key]:
...
22 Jan 2021 16:43:58 ERROR UmlsUserApprover - Server returned HTTP response code: 401 for URL: [https://utslogin.nlm.nih.gov/cas/v1/api-key]22 Jan 2021 16:43:58 ERROR PiperFileRunner - Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed.  (Descriptor: <unknown>)
 
Does anyone please know how to fix this? 
Is there something in the file I can modify to make it work?
 
Thank you so much.
Kylie



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