You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2016/09/07 13:42:29 UTC
[1/4] incubator-taverna-plugin-bioinformatics git commit: Remove
/*****/ lines
Repository: incubator-taverna-plugin-bioinformatics
Updated Branches:
refs/heads/master 6adfc5bfe -> 47ca36607
Remove /*****/ lines
Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/commit/02285a2a
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/tree/02285a2a
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/diff/02285a2a
Branch: refs/heads/master
Commit: 02285a2a3c3ec6d312512a7d19822bbf8f31d343
Parents: 6adfc5b
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Wed Sep 7 14:40:15 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Wed Sep 7 14:40:15 2016 +0100
----------------------------------------------------------------------
.../biomart/actions/BiomartActivityConfigurationAction.java | 2 --
.../t2/activities/biomart/actions/BiomartConfigurationPanel.java | 2 --
.../biomart/servicedescriptions/BiomartActivityIcon.java | 2 --
.../biomart/servicedescriptions/BiomartServiceDescription.java | 1 -
.../activities/biomart/views/BiomartActivityContextualView.java | 2 --
.../t2/activities/biomart/views/BiomartActivityViewFactory.java | 2 --
.../t2/biomart/views/TestBiomartActivityContextualView.java | 2 --
.../net/sf/taverna/t2/activities/biomart/BiomartActivity.java | 2 --
.../t2/activities/biomart/BiomartActivityConfigurationBean.java | 2 --
.../sf/taverna/t2/activities/biomart/BiomartActivityFactory.java | 2 --
.../t2/activities/biomart/BiomartActivityHealthChecker.java | 2 --
.../taverna/t2/activities/biomart/BiomartActivityFactoryTest.java | 2 --
.../src/test/java/org/biomart/martservice/MartDatasetTest.java | 1 -
.../src/test/java/org/biomart/martservice/MartRegistryTest.java | 1 -
.../test/java/org/biomart/martservice/MartServiceUtilsTest.java | 1 -
.../java/org/biomart/martservice/MartServiceXMLHandlerTest.java | 1 -
.../test/java/org/biomart/martservice/MartURLLocationTest.java | 1 -
.../biomart/martservice/config/event/QueryComponentEventTest.java | 1 -
.../org/biomart/martservice/config/ui/MartServiceIconsTest.java | 1 -
.../test/java/org/biomart/martservice/query/AttributeTest.java | 1 -
.../src/test/java/org/biomart/martservice/query/DatasetTest.java | 1 -
.../src/test/java/org/biomart/martservice/query/FilterTest.java | 1 -
.../src/test/java/org/biomart/martservice/query/QueryTest.java | 1 -
.../biomoby/servicedescriptions/BiomobyServiceProvider.java | 2 --
.../soaplab/actions/SoaplabActivityConfigurationAction.java | 2 --
.../t2/activities/soaplab/actions/SoaplabConfigurationPanel.java | 2 --
.../soaplab/servicedescriptions/MissingSoaplabException.java | 3 ---
.../soaplab/servicedescriptions/SoaplabActivityIcon.java | 2 --
.../activities/soaplab/servicedescriptions/SoaplabCategory.java | 3 ---
.../soaplab/servicedescriptions/SoaplabScavengerAgent.java | 3 ---
.../activities/soaplab/views/SoaplabActivityContextualView.java | 2 --
.../t2/activities/soaplab/views/SoaplabActivityViewFactory.java | 2 --
.../soaplab/views/TestSoaplabActivityContextualView.java | 2 --
.../src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java | 2 --
.../net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java | 2 --
.../t2/activities/soaplab/SoaplabActivityConfigurationBean.java | 2 --
.../sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java | 2 --
.../t2/activities/soaplab/SoaplabActivityHealthChecker.java | 2 --
.../activities/soaplab/SoaplabActivityConfigurationBeanTest.java | 2 --
.../net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java | 2 --
40 files changed, 71 deletions(-)
----------------------------------------------------------------------
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
index 6df1af9..10e74a3 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.actions;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
index 06d1a6a..86d1bb5 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.actions;
import java.awt.Dimension;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
index 4affb62..2acd9f2 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
index 0114053..922e999 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
@@ -1,4 +1,3 @@
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
index c6c2bd9..a03e673 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.views;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
index 1836dfc..1cc34c1 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart.views;
import java.util.Arrays;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java b/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
index f8d5c9b..d8c81a8 100644
--- a/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
+++ b/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.biomart.views;
import static org.junit.Assert.assertNotNull;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
index 13fc4f2..2192090 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
index da71551..bfd13d6 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart;
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationBean;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
index a4b8877..786e1f1 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
index 7fb67a6..4d0a792 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java b/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
index eec2c46..4fbc45e 100644
--- a/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
+++ b/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomart;
import static org.junit.Assert.assertEquals;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
index 66eceab..37c8076 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
index 115136a..ec939b7 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
index e90ca0a..0ec2009 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice;
import static org.junit.Assert.*;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
index 7cadce6..7fc2acf 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
index 3546160..e62134b 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
index 0c86d0a..53a78fd 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.config.event;
import org.biomart.martservice.MartDataset;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
index 45c6bb7..189ed58 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.config.ui;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
index c717127..76a28df 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.query;
import org.junit.Test;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
index 22f901c..82f8dc5 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.query;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
index 5961226..ca23ca6 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.query;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
index 4b17984..225bd98 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
@@ -1,5 +1,4 @@
/*
- *****************************************************************/
package org.biomart.martservice.query;
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
index 7e02e16..8dabb48 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.biomoby.servicedescriptions;
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
index dab657f..90f1a30 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.actions;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
index 5895e1c..5a97f42 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.actions;
import java.awt.BorderLayout;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
index bc3ede4..a7e5e23 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
@@ -1,7 +1,4 @@
-/*******************************************************************************
- ******************************************************************************/
/*
- *****************************************************************/
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
@SuppressWarnings("serial")
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
index 29ee07f..c4f15ce 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
index 4bf3672..6c2e538 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
@@ -1,7 +1,4 @@
-/*******************************************************************************
- ******************************************************************************/
/*
- *****************************************************************/
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
index b9127f1..1446763 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
@@ -1,7 +1,4 @@
-/*******************************************************************************
- ******************************************************************************/
/*
- *****************************************************************/
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
import java.rmi.RemoteException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
index 008093c..a350059 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.views;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
index 659f402..218499b 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.views;
import java.util.Arrays;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
index 58fc6ba..3c76e4b 100644
--- a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
+++ b/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab.views;
import static org.junit.Assert.assertNotNull;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
index 8a7f7e1..ad90232 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import java.rmi.RemoteException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
index f345557..37eae39 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
index 126f5b6..93878f6 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationBean;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
index 16f79a1..43871e5 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
index c8177ec..18454a1 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
index fa8b8f4..8610867 100644
--- a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
+++ b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import static org.junit.Assert.assertEquals;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/02285a2a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
index c18a4b0..cecd0e2 100644
--- a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
+++ b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
@@ -1,5 +1,3 @@
-/*******************************************************************************
- ******************************************************************************/
package net.sf.taverna.t2.activities.soaplab;
import static org.junit.Assert.assertEquals;
[3/4] incubator-taverna-plugin-bioinformatics git commit: Added
Apache header
Posted by st...@apache.org.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
index 7fc2acf..2bc081a 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.io.StringReader;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
index e62134b..72f56ed 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
index 53a78fd..6036340 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.config.event;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import org.biomart.martservice.MartDataset;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
index 189ed58..cef3353 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
index 76a28df..807c4c3 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import org.junit.Test;
import org.junit.Before;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
index 82f8dc5..17958c4 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
index ca23ca6..9e05327 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
index 225bd98..476199c 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/AddParserActionHelper.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/AddParserActionHelper.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/AddParserActionHelper.java
index 537dd8b..84565e2 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/AddParserActionHelper.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/AddParserActionHelper.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Dimension;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyObjectTreeCustomRenderer.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyObjectTreeCustomRenderer.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyObjectTreeCustomRenderer.java
index 53384d9..42ae9bf 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyObjectTreeCustomRenderer.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyObjectTreeCustomRenderer.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Color;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyServiceTreeCustomRenderer.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyServiceTreeCustomRenderer.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyServiceTreeCustomRenderer.java
index 9d1b0c8..fbe8cce 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyServiceTreeCustomRenderer.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BioMobyServiceTreeCustomRenderer.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Color;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActionHelper.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActionHelper.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActionHelper.java
index 3270d35..63f55d8 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActionHelper.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActionHelper.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActivityConfigurationAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActivityConfigurationAction.java
index 36ce9ca..a21f66b 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActivityConfigurationAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyActivityConfigurationAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Frame;
import java.awt.event.ActionEvent;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyObjectActionHelper.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyObjectActionHelper.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyObjectActionHelper.java
index e243a09..365bbf3 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyObjectActionHelper.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyObjectActionHelper.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Dimension;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyScavengerDialog.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyScavengerDialog.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyScavengerDialog.java
index 5c6ce8d..e8c6b56 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyScavengerDialog.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/BiomobyScavengerDialog.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.GridLayout;
import java.awt.event.ActionEvent;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectDetailsAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectDetailsAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectDetailsAction.java
index 7195515..e778067 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectDetailsAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectDetailsAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
import java.awt.Dimension;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectTreeNode.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectTreeNode.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectTreeNode.java
index 1aa2292..2248c4b 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectTreeNode.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyObjectTreeNode.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import org.biomoby.shared.MobyNamespace;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyPanel.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyPanel.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyPanel.java
index 455bf27..5ab2a74 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyPanel.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyPanel.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyParserAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyParserAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyParserAction.java
index f1f5b62..5519344 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyParserAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyParserAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
import java.awt.Frame;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceDetailsAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceDetailsAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceDetailsAction.java
index 6ee403d..9c46153 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceDetailsAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceDetailsAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
import java.awt.Dimension;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceTreeNode.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceTreeNode.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceTreeNode.java
index 7c2c083..840d1be 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceTreeNode.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/MobyServiceTreeNode.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
public class MobyServiceTreeNode {
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/PopupThread.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/PopupThread.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/PopupThread.java
index 0c8b9fc..1e8db2e 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/PopupThread.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/PopupThread.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/SimpleActionFrame.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/SimpleActionFrame.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/SimpleActionFrame.java
index bee29da..8070f2f 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/SimpleActionFrame.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/actions/SimpleActionFrame.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/datatypedescriptions/BiomobyDatatypeDescription.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/datatypedescriptions/BiomobyDatatypeDescription.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/datatypedescriptions/BiomobyDatatypeDescription.java
index 35df9b8..f1487e6 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/datatypedescriptions/BiomobyDatatypeDescription.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/datatypedescriptions/BiomobyDatatypeDescription.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.datatypedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyCollectionDataTypeEdit.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyCollectionDataTypeEdit.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyCollectionDataTypeEdit.java
index eeb3753..a2670d2 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyCollectionDataTypeEdit.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyCollectionDataTypeEdit.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.edits;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import net.sf.taverna.t2.activities.biomoby.BiomobyActivity;
import net.sf.taverna.t2.workflowmodel.Dataflow;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyConsumingServiceEdit.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyConsumingServiceEdit.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyConsumingServiceEdit.java
index 586d6cf..44fabd6 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyConsumingServiceEdit.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyConsumingServiceEdit.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.edits;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyDataTypeEdit.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyDataTypeEdit.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyDataTypeEdit.java
index 739f503..5b27a20 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyDataTypeEdit.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddBiomobyDataTypeEdit.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.edits;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddMobyParseDatatypeEdit.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddMobyParseDatatypeEdit.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddMobyParseDatatypeEdit.java
index 7ff5e4d..12d8e45 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddMobyParseDatatypeEdit.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddMobyParseDatatypeEdit.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.edits;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddUpstreamObjectEdit.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddUpstreamObjectEdit.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddUpstreamObjectEdit.java
index 2d0232d..f4a704d 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddUpstreamObjectEdit.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/edits/AddUpstreamObjectEdit.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.edits;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityDetailsMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityDetailsMenuAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityDetailsMenuAction.java
index cee5420..8fe5e35 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityDetailsMenuAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityDetailsMenuAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.menu;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Action;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityParserMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityParserMenuAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityParserMenuAction.java
index b760bbc..55627e6 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityParserMenuAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/BiomobyActivityParserMenuAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.menu;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Action;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/ConfigureBiomobyMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/ConfigureBiomobyMenuAction.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/ConfigureBiomobyMenuAction.java
index b86df2a..a2c75e2 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/ConfigureBiomobyMenuAction.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/menu/ConfigureBiomobyMenuAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.menu;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Action;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityIcon.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityIcon.java
index 5b2106a..45f76f4 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityIcon.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityIcon.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Icon;
import javax.swing.ImageIcon;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityItem.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityItem.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityItem.java
index e5fb5c4..9de855a 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityItem.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyActivityItem.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
public class BiomobyActivityItem /*extends AbstractActivityItem */{
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityIcon.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityIcon.java
index aca7cf7..984a5d8 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityIcon.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityIcon.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Icon;
import javax.swing.ImageIcon;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityItem.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityItem.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityItem.java
index 5c96869..0a5cf5f 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityItem.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyObjectActivityItem.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyQueryHelper.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyQueryHelper.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyQueryHelper.java
index 6447393..4c7ecda 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyQueryHelper.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/BiomobyQueryHelper.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.File;
import java.io.InputStream;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/CacheImpl.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/CacheImpl.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/CacheImpl.java
index 147f401..ef88d2d 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/CacheImpl.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/query/CacheImpl.java
@@ -4,6 +4,22 @@
* Copyright Edward Kawas, Martin Senger, The BioMoby Project
*/
package net.sf.taverna.t2.activities.biomoby.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.BufferedOutputStream;
import java.io.BufferedReader;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceDescription.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceDescription.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceDescription.java
index f327e96..958c0d0 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceDescription.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceDescription.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.Arrays;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
index 8dabb48..01c4820 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProvider.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProviderConfig.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProviderConfig.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProviderConfig.java
index 3f568c7..0c92c8d 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProviderConfig.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/servicedescriptions/BiomobyServiceProviderConfig.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/AddBiomobyDialogue.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/AddBiomobyDialogue.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/AddBiomobyDialogue.java
index 99b82f9..57335d1 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/AddBiomobyDialogue.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/AddBiomobyDialogue.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.event.ActionEvent;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/BiomobyObjectTree.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/BiomobyObjectTree.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/BiomobyObjectTree.java
index 52622cd..fdd46e1 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/BiomobyObjectTree.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/BiomobyObjectTree.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/DatatypeMenuItem.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/DatatypeMenuItem.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/DatatypeMenuItem.java
index 6002a4d..57fce89 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/DatatypeMenuItem.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/ui/DatatypeMenuItem.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualView.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualView.java
index d64634a..58cf3d1 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualView.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualView.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.FlowLayout;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualViewFactory.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualViewFactory.java
index 24c9a5d..5c23602 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualViewFactory.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyActivityContextualViewFactory.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Arrays;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyConfigView.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyConfigView.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyConfigView.java
index 0e08e0b..2c4590e 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyConfigView.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyConfigView.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.util.Map;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualView.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualView.java
index 6fe4099..1167ada 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualView.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualView.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.FlowLayout;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualViewFactory.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualViewFactory.java
index 86b0591..1961f04 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualViewFactory.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyObjectActivityContextualViewFactory.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Arrays;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualView.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualView.java
index dc07ba2..45e1dc6 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualView.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualView.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import net.sf.taverna.t2.activities.biomoby.MobyParseDatatypeActivityConfigurationBean;
import net.sf.taverna.t2.workbench.configuration.colour.ColourManager;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualViewFactory.java b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualViewFactory.java
index 9032f02..0ab6adc 100644
--- a/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualViewFactory.java
+++ b/taverna-biomoby-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomoby/view/MobyParseDatatypeContextualViewFactory.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Arrays;
import java.util.List;
[2/4] incubator-taverna-plugin-bioinformatics git commit: Added
Apache header
Posted by st...@apache.org.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomoby-activity-ui/src/test/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyContextualViewFactoryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/src/test/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyContextualViewFactoryTest.java b/taverna-biomoby-activity-ui/src/test/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyContextualViewFactoryTest.java
index 1e18b80..bbb2644 100644
--- a/taverna-biomoby-activity-ui/src/test/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyContextualViewFactoryTest.java
+++ b/taverna-biomoby-activity-ui/src/test/java/net/sf/taverna/t2/activities/biomoby/view/BiomobyContextualViewFactoryTest.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomoby.view;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertTrue;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
index 90f1a30..7fe13fc 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Frame;
import java.awt.event.ActionEvent;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
index 5a97f42..2c45d27 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.event.ActionListener;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java
index f182ecb..def8bfa 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.menu;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import javax.swing.Action;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
index a7e5e23..43f6052 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java
@@ -1,5 +1,21 @@
/*
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
@SuppressWarnings("serial")
public class MissingSoaplabException extends Exception {
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
index c4f15ce..1763826 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
index 6c2e538..bea9bc4 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java
@@ -1,5 +1,21 @@
/*
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
index 1446763..6a6bc4e 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java
@@ -1,5 +1,21 @@
/*
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.rmi.RemoteException;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java
index 1d2a48b..35de94f 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java
index 54080c9..f754fac 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.rmi.RemoteException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java
index d1e86da..e34597d 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
index a350059..2b5ad41 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Frame;
import java.io.ByteArrayInputStream;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
index 218499b..6515fd6 100644
--- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
+++ b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Arrays;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
index 3c76e4b..3ef7228 100644
--- a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
+++ b/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
index ad90232..8b20eb4 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.rmi.RemoteException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
index 37eae39..a463c32 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivity.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
index 93878f6..470e00d 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBean.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationBean;
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationProperty;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
index 43871e5..0a4acf6 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityFactory.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
index 18454a1..b5947ab 100644
--- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
+++ b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityHealthChecker.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.net.HttpURLConnection;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
index 8610867..57b0c4a 100644
--- a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
+++ b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityConfigurationBeanTest.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNull;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
index cecd0e2..b76981e 100644
--- a/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
+++ b/taverna-soaplab-activity/src/test/java/net/sf/taverna/t2/activities/soaplab/SoaplabActivityTest.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.soaplab;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
[4/4] incubator-taverna-plugin-bioinformatics git commit: Added
Apache header
Posted by st...@apache.org.
Added Apache header
Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/commit/47ca3660
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/tree/47ca3660
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/diff/47ca3660
Branch: refs/heads/master
Commit: 47ca366073f0447a8ba2948ff9e9be0edf678bbd
Parents: 02285a2
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Wed Sep 7 14:42:07 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Wed Sep 7 14:42:07 2016 +0100
----------------------------------------------------------------------
.../actions/BiomartActivityConfigurationAction.java | 16 ++++++++++++++++
.../biomart/actions/BiomartConfigurationPanel.java | 16 ++++++++++++++++
.../menu/BiomartConfigurationMenuAction.java | 16 ++++++++++++++++
.../servicedescriptions/BiomartActivityIcon.java | 16 ++++++++++++++++
.../BiomartServiceDescription.java | 16 ++++++++++++++++
.../servicedescriptions/BiomartServiceProvider.java | 16 ++++++++++++++++
.../BiomartServiceProviderConfig.java | 16 ++++++++++++++++
.../views/BiomartActivityContextualView.java | 16 ++++++++++++++++
.../biomart/views/BiomartActivityViewFactory.java | 16 ++++++++++++++++
.../views/TestBiomartActivityContextualView.java | 16 ++++++++++++++++
.../t2/activities/biomart/BiomartActivity.java | 16 ++++++++++++++++
.../biomart/BiomartActivityConfigurationBean.java | 16 ++++++++++++++++
.../activities/biomart/BiomartActivityFactory.java | 16 ++++++++++++++++
.../biomart/BiomartActivityHealthChecker.java | 16 ++++++++++++++++
.../biomart/BiomartActivityFactoryTest.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/DatasetLink.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/MartDataset.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/MartQuery.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/MartRegistry.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/MartService.java | 16 ++++++++++++++++
.../biomart/martservice/MartServiceException.java | 16 ++++++++++++++++
.../org/biomart/martservice/MartServiceUtils.java | 16 ++++++++++++++++
.../biomart/martservice/MartServiceXMLHandler.java | 16 ++++++++++++++++
.../org/biomart/martservice/MartURLLocation.java | 16 ++++++++++++++++
.../org/biomart/martservice/ResultReceiver.java | 16 ++++++++++++++++
.../martservice/ResultReceiverException.java | 16 ++++++++++++++++
.../martservice/config/QueryConfigController.java | 16 ++++++++++++++++
.../martservice/config/QueryConfigUtils.java | 16 ++++++++++++++++
.../config/event/QueryComponentAdapter.java | 16 ++++++++++++++++
.../config/event/QueryComponentEvent.java | 16 ++++++++++++++++
.../config/event/QueryComponentListener.java | 16 ++++++++++++++++
.../martservice/config/ui/ConfigDisplayObject.java | 16 ++++++++++++++++
.../martservice/config/ui/ExpandableBox.java | 16 ++++++++++++++++
.../martservice/config/ui/MartServiceIcons.java | 16 ++++++++++++++++
.../config/ui/MartServiceQueryConfigUIFactory.java | 16 ++++++++++++++++
.../martservice/config/ui/MinimalLayout.java | 16 ++++++++++++++++
.../martservice/config/ui/QueryComponent.java | 16 ++++++++++++++++
.../martservice/config/ui/QueryConfigUIFactory.java | 16 ++++++++++++++++
.../org/biomart/martservice/query/Attribute.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/query/Dataset.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/query/Filter.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/query/Link.java | 16 ++++++++++++++++
.../java/org/biomart/martservice/query/Query.java | 16 ++++++++++++++++
.../biomart/martservice/query/QueryListener.java | 16 ++++++++++++++++
.../biomart/martservice/query/QueryXMLHandler.java | 16 ++++++++++++++++
.../org/biomart/martservice/MartDatasetTest.java | 16 ++++++++++++++++
.../org/biomart/martservice/MartRegistryTest.java | 16 ++++++++++++++++
.../biomart/martservice/MartServiceUtilsTest.java | 16 ++++++++++++++++
.../martservice/MartServiceXMLHandlerTest.java | 16 ++++++++++++++++
.../biomart/martservice/MartURLLocationTest.java | 16 ++++++++++++++++
.../config/event/QueryComponentEventTest.java | 16 ++++++++++++++++
.../martservice/config/ui/MartServiceIconsTest.java | 16 ++++++++++++++++
.../biomart/martservice/query/AttributeTest.java | 16 ++++++++++++++++
.../org/biomart/martservice/query/DatasetTest.java | 16 ++++++++++++++++
.../org/biomart/martservice/query/FilterTest.java | 16 ++++++++++++++++
.../org/biomart/martservice/query/QueryTest.java | 16 ++++++++++++++++
.../biomoby/actions/AddParserActionHelper.java | 16 ++++++++++++++++
.../actions/BioMobyObjectTreeCustomRenderer.java | 16 ++++++++++++++++
.../actions/BioMobyServiceTreeCustomRenderer.java | 16 ++++++++++++++++
.../biomoby/actions/BiomobyActionHelper.java | 16 ++++++++++++++++
.../actions/BiomobyActivityConfigurationAction.java | 16 ++++++++++++++++
.../biomoby/actions/BiomobyObjectActionHelper.java | 16 ++++++++++++++++
.../biomoby/actions/BiomobyScavengerDialog.java | 16 ++++++++++++++++
.../biomoby/actions/MobyObjectDetailsAction.java | 16 ++++++++++++++++
.../biomoby/actions/MobyObjectTreeNode.java | 16 ++++++++++++++++
.../t2/activities/biomoby/actions/MobyPanel.java | 16 ++++++++++++++++
.../biomoby/actions/MobyParserAction.java | 16 ++++++++++++++++
.../biomoby/actions/MobyServiceDetailsAction.java | 16 ++++++++++++++++
.../biomoby/actions/MobyServiceTreeNode.java | 16 ++++++++++++++++
.../t2/activities/biomoby/actions/PopupThread.java | 16 ++++++++++++++++
.../biomoby/actions/SimpleActionFrame.java | 16 ++++++++++++++++
.../BiomobyDatatypeDescription.java | 16 ++++++++++++++++
.../edits/AddBiomobyCollectionDataTypeEdit.java | 16 ++++++++++++++++
.../edits/AddBiomobyConsumingServiceEdit.java | 16 ++++++++++++++++
.../biomoby/edits/AddBiomobyDataTypeEdit.java | 16 ++++++++++++++++
.../biomoby/edits/AddMobyParseDatatypeEdit.java | 16 ++++++++++++++++
.../biomoby/edits/AddUpstreamObjectEdit.java | 16 ++++++++++++++++
.../menu/BiomobyActivityDetailsMenuAction.java | 16 ++++++++++++++++
.../menu/BiomobyActivityParserMenuAction.java | 16 ++++++++++++++++
.../biomoby/menu/ConfigureBiomobyMenuAction.java | 16 ++++++++++++++++
.../biomoby/query/BiomobyActivityIcon.java | 16 ++++++++++++++++
.../biomoby/query/BiomobyActivityItem.java | 16 ++++++++++++++++
.../biomoby/query/BiomobyObjectActivityIcon.java | 16 ++++++++++++++++
.../biomoby/query/BiomobyObjectActivityItem.java | 16 ++++++++++++++++
.../biomoby/query/BiomobyQueryHelper.java | 16 ++++++++++++++++
.../t2/activities/biomoby/query/CacheImpl.java | 16 ++++++++++++++++
.../BiomobyServiceDescription.java | 16 ++++++++++++++++
.../servicedescriptions/BiomobyServiceProvider.java | 16 ++++++++++++++++
.../BiomobyServiceProviderConfig.java | 16 ++++++++++++++++
.../activities/biomoby/ui/AddBiomobyDialogue.java | 16 ++++++++++++++++
.../t2/activities/biomoby/ui/BiomobyObjectTree.java | 16 ++++++++++++++++
.../t2/activities/biomoby/ui/DatatypeMenuItem.java | 16 ++++++++++++++++
.../biomoby/view/BiomobyActivityContextualView.java | 16 ++++++++++++++++
.../view/BiomobyActivityContextualViewFactory.java | 16 ++++++++++++++++
.../activities/biomoby/view/BiomobyConfigView.java | 16 ++++++++++++++++
.../view/BiomobyObjectActivityContextualView.java | 16 ++++++++++++++++
.../BiomobyObjectActivityContextualViewFactory.java | 16 ++++++++++++++++
.../view/MobyParseDatatypeContextualView.java | 16 ++++++++++++++++
.../MobyParseDatatypeContextualViewFactory.java | 16 ++++++++++++++++
.../view/BiomobyContextualViewFactoryTest.java | 16 ++++++++++++++++
.../actions/SoaplabActivityConfigurationAction.java | 16 ++++++++++++++++
.../soaplab/actions/SoaplabConfigurationPanel.java | 16 ++++++++++++++++
.../menu/ConfigureSoaplabActivityMenuAction.java | 16 ++++++++++++++++
.../MissingSoaplabException.java | 16 ++++++++++++++++
.../servicedescriptions/SoaplabActivityIcon.java | 16 ++++++++++++++++
.../servicedescriptions/SoaplabCategory.java | 16 ++++++++++++++++
.../servicedescriptions/SoaplabScavengerAgent.java | 16 ++++++++++++++++
.../SoaplabServiceDescription.java | 16 ++++++++++++++++
.../servicedescriptions/SoaplabServiceProvider.java | 16 ++++++++++++++++
.../SoaplabServiceProviderConfig.java | 16 ++++++++++++++++
.../views/SoaplabActivityContextualView.java | 16 ++++++++++++++++
.../soaplab/views/SoaplabActivityViewFactory.java | 16 ++++++++++++++++
.../views/TestSoaplabActivityContextualView.java | 16 ++++++++++++++++
.../net/sf/taverna/t2/activities/soaplab/Soap.java | 16 ++++++++++++++++
.../t2/activities/soaplab/SoaplabActivity.java | 16 ++++++++++++++++
.../soaplab/SoaplabActivityConfigurationBean.java | 16 ++++++++++++++++
.../activities/soaplab/SoaplabActivityFactory.java | 16 ++++++++++++++++
.../soaplab/SoaplabActivityHealthChecker.java | 16 ++++++++++++++++
.../SoaplabActivityConfigurationBeanTest.java | 16 ++++++++++++++++
.../t2/activities/soaplab/SoaplabActivityTest.java | 16 ++++++++++++++++
120 files changed, 1920 insertions(+)
----------------------------------------------------------------------
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
index 10e74a3..3b355a7 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Frame;
import java.awt.event.ActionEvent;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
index 86d1bb5..1dd940e 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.actions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Dimension;
import java.io.File;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/menu/BiomartConfigurationMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/menu/BiomartConfigurationMenuAction.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/menu/BiomartConfigurationMenuAction.java
index 775ce95..5f96b42 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/menu/BiomartConfigurationMenuAction.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/menu/BiomartConfigurationMenuAction.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.menu;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
index 2acd9f2..269a477 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartActivityIcon.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
index 922e999..49d4e6e 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.Arrays;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java
index 712e8d8..3e21275 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.net.URI;
import java.util.ArrayList;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProviderConfig.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProviderConfig.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProviderConfig.java
index 9891fae..929c097 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProviderConfig.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProviderConfig.java
@@ -2,6 +2,22 @@
*
*/
package net.sf.taverna.t2.activities.biomart.servicedescriptions;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import net.sf.taverna.t2.lang.beans.PropertyAnnotated;
import net.sf.taverna.t2.lang.beans.PropertyAnnotation;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
index a03e673..1c85aa4 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Frame;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
index 1cc34c1..c7bed24 100644
--- a/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
+++ b/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Arrays;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java b/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
index d8c81a8..ff1ae3c 100644
--- a/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
+++ b/taverna-biomart-activity-ui/src/test/java/net/sf/taverna/t2/biomart/views/TestBiomartActivityContextualView.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.biomart.views;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
index 2192090..06bc104 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivity.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.io.StringReader;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
index bfd13d6..16eda4e 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityConfigurationBean.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationBean;
import net.sf.taverna.t2.workflowmodel.processor.config.ConfigurationProperty;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
index 786e1f1..af3fab6 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactory.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.io.StringReader;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
index 4d0a792..f98b853 100644
--- a/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
+++ b/taverna-biomart-activity/src/main/java/net/sf/taverna/t2/activities/biomart/BiomartActivityHealthChecker.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.IOException;
import java.io.StringReader;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java b/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
index 4fbc45e..2acf1c3 100644
--- a/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
+++ b/taverna-biomart-activity/src/test/java/net/sf/taverna/t2/activities/biomart/BiomartActivityFactoryTest.java
@@ -1,4 +1,20 @@
package net.sf.taverna.t2.activities.biomart;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNotNull;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/DatasetLink.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/DatasetLink.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/DatasetLink.java
index 65330cf..a006ddb 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/DatasetLink.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/DatasetLink.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Comparator;
import java.util.HashSet;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartDataset.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartDataset.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartDataset.java
index 6090dcf..ffbb817 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartDataset.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartDataset.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Comparator;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartQuery.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartQuery.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartQuery.java
index fe4be71..caf4517 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartQuery.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartQuery.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.HashMap;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartRegistry.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartRegistry.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartRegistry.java
index 85df4ae..63950de 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartRegistry.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartRegistry.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartService.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartService.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartService.java
index c6f4de1..1157274 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartService.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartService.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.File;
import java.io.FileInputStream;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceException.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceException.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceException.java
index a6adb3b..d54c954 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceException.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceException.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* Thrown when a MartService is inaccessable or returns an error.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceUtils.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceUtils.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceUtils.java
index 9319cee..eb5c3f2 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceUtils.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceUtils.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.io.BufferedReader;
import java.io.IOException;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceXMLHandler.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceXMLHandler.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceXMLHandler.java
index c4d3982..3f19a8d 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceXMLHandler.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartServiceXMLHandler.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.Iterator;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartURLLocation.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartURLLocation.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartURLLocation.java
index 6a15aa1..bcf9842 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartURLLocation.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/MartURLLocation.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import org.ensembl.mart.lib.config.MartLocation;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiver.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiver.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiver.java
index 952899c..a3f0256 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiver.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiver.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* An interface for receiving results of a Query.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiverException.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiverException.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiverException.java
index 6386c9b..82b9b96 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiverException.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/ResultReceiverException.java
@@ -1,4 +1,20 @@
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
*
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigController.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigController.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigController.java
index bd44a7f..864af45 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigController.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigController.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.HashMap;
import java.util.Iterator;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigUtils.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigUtils.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigUtils.java
index 8b93922..209b888 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigUtils.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/QueryConfigUtils.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
import java.awt.Font;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentAdapter.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentAdapter.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentAdapter.java
index c22d3ff..280b2f5 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentAdapter.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentAdapter.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.event;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* An abstract adapter class for receiving <code>QueryComponent</code> events.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentEvent.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentEvent.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentEvent.java
index 8364233..cdfb741 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentEvent.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentEvent.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.event;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.EventObject;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentListener.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentListener.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentListener.java
index 6542da8..c4a5b34 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentListener.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/event/QueryComponentListener.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.event;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.EventListener;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ConfigDisplayObject.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ConfigDisplayObject.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ConfigDisplayObject.java
index 0e5b1e1..fc5241f 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ConfigDisplayObject.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ConfigDisplayObject.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ExpandableBox.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ExpandableBox.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ExpandableBox.java
index 932ea9d..288df3b 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ExpandableBox.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/ExpandableBox.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Color;
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceIcons.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceIcons.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceIcons.java
index 33471fa..c538957 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceIcons.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceIcons.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.HashMap;
import java.util.Map;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceQueryConfigUIFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceQueryConfigUIFactory.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceQueryConfigUIFactory.java
index 2655d7b..1ce34d0 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceQueryConfigUIFactory.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MartServiceQueryConfigUIFactory.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.BorderLayout;
import java.awt.Color;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MinimalLayout.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MinimalLayout.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MinimalLayout.java
index bf67bdb..0fee270 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MinimalLayout.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/MinimalLayout.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
import java.awt.Container;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryComponent.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryComponent.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryComponent.java
index fdc92c7..27f646d 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryComponent.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryComponent.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.event.ItemEvent;
import java.awt.event.ItemListener;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryConfigUIFactory.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryConfigUIFactory.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryConfigUIFactory.java
index 20ca314..77edb6d 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryConfigUIFactory.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/config/ui/QueryConfigUIFactory.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.config.ui;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.awt.Component;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Attribute.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Attribute.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Attribute.java
index a6bdcf7..82a909d 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Attribute.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Attribute.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* Class for creating attribute elements of mart queries.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Dataset.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Dataset.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Dataset.java
index 7e24117..33d7fa0 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Dataset.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Dataset.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Filter.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Filter.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Filter.java
index 860e38f..c229b1a 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Filter.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Filter.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* Class for creating filter elements of mart queries.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Link.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Link.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Link.java
index 834efa1..efcbdc9 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Link.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Link.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* Class for creating link elements of mart queries.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Query.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Query.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Query.java
index 5261bc4..ad04856 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Query.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/Query.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.ArrayList;
import java.util.HashMap;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryListener.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryListener.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryListener.java
index 1752823..192e147 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryListener.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryListener.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
/**
* The listener interface for receiving Query events.
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryXMLHandler.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryXMLHandler.java b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryXMLHandler.java
index cacde0b..0f47ff1 100644
--- a/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryXMLHandler.java
+++ b/taverna-biomart-martservice/src/main/java/org/biomart/martservice/query/QueryXMLHandler.java
@@ -1,4 +1,20 @@
package org.biomart.martservice.query;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import java.util.List;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
index 37c8076..db63907 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
index ec939b7..103a01c 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import junit.framework.TestCase;
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/47ca3660/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
index 0ec2009..5d0c981 100644
--- a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
+++ b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java
@@ -1,5 +1,21 @@
/*
package org.biomart.martservice;
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
import static org.junit.Assert.*;