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Posted to common-dev@hadoop.apache.org by "Billy Pearson (JIRA)" <ji...@apache.org> on 2008/01/30 07:20:34 UTC

[jira] Created: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

[hbase] Split failed due to spliting of a split before compaction could complete after first split.
---------------------------------------------------------------------------------------------------

                 Key: HADOOP-2741
                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
             Project: Hadoop Core
          Issue Type: Bug
          Components: contrib/hbase
         Environment: svc hadoop 616618
            Reporter: Billy Pearson
             Fix For: 0.16.0


This error happened after a region tried to split before a complete compaction could be done on the region from the first split
I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.


{code}
2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
        at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
        at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
        at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
        at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
        at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
        at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
        at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
        at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
{code}

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[jira] Updated: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Billy Pearson updated HADOOP-2741:
----------------------------------

    Attachment: image1.JPG

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Commented: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12564275#action_12564275 ] 

Billy Pearson commented on HADOOP-2741:
---------------------------------------

moved to unknown until it can be looked at again I thank it might have to do with the latest patch from HADOOP-2636 so its not related to trunk yet


> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Commented: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12563848#action_12563848 ] 

Billy Pearson commented on HADOOP-2741:
---------------------------------------

The region server does not crash from this but it does take the region offline and it never comes back online.


> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Commented: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12563860#action_12563860 ] 

Billy Pearson commented on HADOOP-2741:
---------------------------------------

I thought this was from a call to a file split but looking now and see what failed somehow the file just is not there.

I was testing the splits to see if the split would fail if all family columns where not compacted before the next split so we would have to reference source file 2 split levels but not sure if this is the bug that did the above error or not.

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Resolved: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Billy Pearson resolved HADOOP-2741.
-----------------------------------

    Resolution: Cannot Reproduce

I thank a combine commit of several patches make this issue go away

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Commented: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12563863#action_12563863 ] 

Billy Pearson commented on HADOOP-2741:
---------------------------------------

attached images

image1 is the 
/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/

showing the reference for the split

image2 shoes the reference folder

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Commented: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Mukund Madhugiri (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12564251#action_12564251 ] 

Mukund Madhugiri commented on HADOOP-2741:
------------------------------------------

This is marked for 0.16.0. Is it a blocker for 0.16.0 (not currently marked as a blocker) or can it be moved to 0.16.1?

Thanks

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Updated: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Billy Pearson updated HADOOP-2741:
----------------------------------

    Fix Version/s:     (was: 0.16.0)

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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[jira] Updated: (HADOOP-2741) [hbase] Split failed due to spliting of a split before compaction could complete after first split.

Posted by "Billy Pearson (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2741?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Billy Pearson updated HADOOP-2741:
----------------------------------

    Attachment: image2.JPG

> [hbase] Split failed due to spliting of a split before compaction could complete after first split.
> ---------------------------------------------------------------------------------------------------
>
>                 Key: HADOOP-2741
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2741
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>         Environment: svc hadoop 616618
>            Reporter: Billy Pearson
>             Fix For: 0.16.0
>
>         Attachments: image1.JPG, image2.JPG
>
>
> This error happened after a region tried to split before a complete compaction could be done on the region from the first split
> I thank we should que up a compaction on loading of a region on a region server this should help keep this from happening but also we should have the split thread check to see if the region safe to split.
> {code}
> 2008-01-30 00:07:34,250 ERROR org.apache.hadoop.hbase.HRegionServer: Split failed for region webdata,,1201671207519
> java.io.FileNotFoundException: File hdfs://10.0.0.1:9000/gfs_storage/hadoop-root/hbase/webdata/1080614411/size/mapfiles/5351268197296217146/data does not exist.
>         at org.apache.hadoop.dfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:341)
>         at org.apache.hadoop.hbase.HStoreFile.length(HStoreFile.java:456)
>         at org.apache.hadoop.hbase.HStore.loadHStoreFiles(HStore.java:876)
>         at org.apache.hadoop.hbase.HStore.<init>(HStore.java:731)
>         at org.apache.hadoop.hbase.HRegion.<init>(HRegion.java:286)
>         at org.apache.hadoop.hbase.HRegion.splitRegion(HRegion.java:597)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.split(HRegionServer.java:303)
>         at org.apache.hadoop.hbase.HRegionServer$Splitter.run(HRegionServer.java:263)
> {code}

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