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Posted to commits@mxnet.apache.org by GitBox <gi...@apache.org> on 2020/07/23 06:28:11 UTC
[GitHub] [incubator-mxnet] niranjannilekani opened a new issue #18774: unable to install mxnet package in R 4.0.1
niranjannilekani opened a new issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774
## Description
Iam unable to install mxnet package in R 4.0.1
### Error Message
package ‘mxnet’ was installed before R 4.0.0: please re-install it
## To Reproduce
(If you developed your own code, please provide a short script that reproduces the error. For existing examples, please provide link.)
### Steps to reproduce
(Paste the commands you ran that produced the error.)
1.
2.
## What have you tried to solve it?
1.
2.
## Environment
We recommend using our script for collecting the diagnositc information. Run the following command and paste the outputs below:
```
curl --retry 10 -s https://raw.githubusercontent.com/dmlc/gluon-nlp/master/tools/diagnose.py | python
# paste outputs here
```
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[GitHub] [incubator-mxnet] leezu commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-665798463
As the error message mentions, there is no binary CRAN package ‘mxnet’ is available for R version 4.0.2. You can compile from source following the instructions: https://github.com/apache/incubator-mxnet/blob/v1.x/docs/static_site/src/pages/get_started/ubuntu_setup.md
cc @ys2843 @sandeep-krishnamurthy the instructions are missing on https://mxnet.apache.org/versions/1.6/get_started/build_from_source.html
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[GitHub] [incubator-mxnet] JaimeGoB commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
JaimeGoB commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-739449493
@appropiate will you able to install mxnet? I am facing the same issues as you. I cannot install mxnet, no matter what I do. I am running R 4.0.1 on MAC.
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[GitHub] [incubator-mxnet] JaimeGoB edited a comment on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
JaimeGoB edited a comment on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-739449493
@appropiate were you able to install mxnet? I am facing the same issues as you. I cannot install mxnet, no matter what I do. I am running R 4.0.1 on MAC.
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670305386
please help
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[GitHub] [incubator-mxnet] hetong007 commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
hetong007 commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663322625
@niranjannilekani could you share more with us about:
1. The commands you run that eventually lead to the error message
2. The result of executing `sessionInfo()` in your R console
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[GitHub] [incubator-mxnet] leezu commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-668694727
As you're on Windows, you need to follow the Windows guide instead of the Linux guide. Please see https://github.com/apache/incubator-mxnet/blob/v1.x/docs/static_site/src/pages/get_started/windows_setup.md Sorry that I linked the wrong guide for your case before.
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663642338
> cran <- getOption("repos")
> cran["dmlc"] <- "https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/"
> options(repos = cran)
> install.packages("mxnet")
Installing package into ‘C:/Users/niranjan.nilekani/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
Warning in install.packages :
unable to access index for repository https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/bin/windows/contrib/4.0:
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/bin/windows/contrib/4.0/PACKAGES'
installing the source package ‘mxnet’
trying URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz': HTTP status was '404 Not Found'
Error in download.file(url, destfile, method, mode = "wb", ...) :
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
download of package ‘mxnet’ failed
> library("mxnet", lib.loc="C:/Users/niranjan.nilekani/R-3.6.0/mxnet.zip")
Error in library("mxnet", lib.loc = "C:/Users/niranjan.nilekani/R-3.6.0/mxnet.zip") :
no library trees found in 'lib.loc'
> library(mxnet)
Error: package or namespace load failed for ‘mxnet’:
package ‘mxnet’ was installed before R 4.0.0: please re-install it
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-668602798
Hi Leezu, where should i run below commands??
Please guide me...iam struggling hard to get mxnet installed
sudo apt-get update
sudo apt-get install -y r-base-core r-cran-devtools libcairo2-dev libxml2-dev
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[GitHub] [incubator-mxnet] leezu commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-770825247
@JaimeGoB sorry, I'm not an R user so I'm not too familiar with this setup. But you can google for a tutorial about how to use Python packages from R. After you installed the MXNet Python package `pip install mxnet`, any such tutorial would apply.
If you can comment here with the steps you took, that may help future users
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[GitHub] [incubator-mxnet] hetong007 commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
hetong007 commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670347577
@niranjannilekani Since you have a new R version, [Building MXNet-R from Source Code(CPU)](https://github.com/apache/incubator-mxnet/blob/v1.x/docs/static_site/src/pages/get_started/windows_setup.md#building-mxnet-r-from-source-codecpu) is what you should go for. Please follow it strictly and ping me here if stucked.
Some additional points:
- It involves compilation on your system, so RTools is required: https://cran.r-project.org/bin/windows/Rtools/
- If you intend to use GPU, please make sure you can compile a CPU version first, then follow the next section [Installing MXNet-R on a Computer with a GPU Processor](https://github.com/apache/incubator-mxnet/blob/v1.x/docs/static_site/src/pages/get_started/windows_setup.md#installing-mxnet-r-on-a-computer-with-a-gpu-processor)
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[GitHub] [incubator-mxnet] waynelapierre commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
waynelapierre commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-769246389
any update?
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[GitHub] [incubator-mxnet] hetong007 edited a comment on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
hetong007 edited a comment on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670347577
@niranjannilekani Since you have a new R version, [Building MXNet-R from Source Code(CPU)](https://github.com/apache/incubator-mxnet/blob/981da7ea7a6958f449a69ce5c7ba97ad09952f18/docs/static_site/src/pages/get_started/windows_setup.md#building-mxnet-r-from-source-codecpu) is what you should go for. Please follow it strictly and ping me here if stucked.
Some additional points:
- It involves compilation on your system, so RTools is required: https://cran.r-project.org/bin/windows/Rtools/
- If you intend to use GPU, please make sure you can compile a CPU version first, then follow the next section [Installing MXNet-R on a Computer with a GPU Processor](https://github.com/apache/incubator-mxnet/blob/v1.x/docs/static_site/src/pages/get_started/windows_setup.md#installing-mxnet-r-on-a-computer-with-a-gpu-processor)
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663641777
> install.packages("https://s3.ca-central-1.amazonaws.com/jeremiedb/share/mxnet/GPU/mxnet.zip", repos = NULL)
Installing package into ‘C:/Users/niranjan.nilekani/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
trying URL 'https://s3.ca-central-1.amazonaws.com/jeremiedb/share/mxnet/GPU/mxnet.zip'
Content type 'application/zip' length 348148417 bytes (332.0 MB)
downloaded 332.0 MB
> library(mxnet)
Error: package or namespace load failed for ‘mxnet’:
package ‘mxnet’ was installed before R 4.0.0: please re-install it
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[GitHub] [incubator-mxnet] JaimeGoB edited a comment on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
JaimeGoB edited a comment on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-739449493
@appropiate where you able to install mxnet? I am facing the same issues as you. I cannot install mxnet, no matter what I do. I am running R 4.0.1 on MAC.
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[GitHub] [incubator-mxnet] leezu commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-769324820
Please use https://cran.r-project.org/web/packages/reticulate/vignettes/calling_python.html + the MXNet Python package
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670305306
the link given in dmlc gives error, see below
This XML file does not appear to have any style information associated with it. The document tree is shown below.
<Error>
<Code>NoSuchKey</Code>
<Message>The specified key does not exist.</Message>
<Key>R/CRAN/</Key>
<RequestId>A3993535E1D9E0C4</RequestId>
<HostId>0B6k+WtkHSwfxQYiW3MJx+zVcagJQWgSdlPNz04UIRsdu5AaB5djyEWphIHtGA6YE552n5I8CPA=</HostId>
</Error>
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663642739
> sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)
Matrix products: default
Random number generation:
RNG: Mersenne-Twister
Normal: Inversion
Sample: Rounding
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] compiler_4.0.2 Matrix_1.2-18 tools_4.0.2 survival_3.1-12 splines_4.0.2 grid_4.0.2 lattice_0.20-41
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[GitHub] [incubator-mxnet] JaimeGoB commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
JaimeGoB commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-770439773
@leezu can you please give an example(code) on how to load mxNet with R 4.0.2, with the link you just gave use?
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[GitHub] [incubator-mxnet] vikram-rawat commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
vikram-rawat commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-750233055
I have the same problem. mxNet is not available for R 4.0.2. Please look into it.
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663643235
i tried running all possible solutions available, but not able to install mxnet. Kindly help
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[GitHub] [incubator-mxnet] appropiate commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
appropiate commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-727725612
Is there any info on whether there will be mxnet binaries on CRAN for R v4.0 in the near future?
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670305003
Hi Leezu
i tried to install using pre built binary package CPU, but iam getting error as shown below.
R version 4.0.2 (2020-06-22) -- "Taking Off Again"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
[Workspace loaded from ~/.RData]
> cran <- getOption("repos")
> cran["dmlc"] <- "https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/"
> options(repos = cran)
> install.packages("mxnet")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/niranjan.nilekani/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
Warning in install.packages :
unable to access index for repository https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/bin/windows/contrib/4.0:
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/bin/windows/contrib/4.0/PACKAGES'
installing the source package ‘mxnet’
trying URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz': HTTP status was '404 Not Found'
Error in download.file(url, destfile, method, mode = "wb", ...) :
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
download of package ‘mxnet’ failed
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-665414677
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[GitHub] [incubator-mxnet] sandeep-krishnamurthy commented on issue #18774: No mxnet binaries on CRAN for R v4.0.1
Posted by GitBox <gi...@apache.org>.
sandeep-krishnamurthy commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-670312886
@hetong007 can you please help with this issue with a recommendation?
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[GitHub] [incubator-mxnet] szha commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
szha commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663065512
@niranjannilekani thanks for reporting. @hetong007 could you help on this?
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[GitHub] [incubator-mxnet] niranjannilekani commented on issue #18774: unable to install mxnet package in R 4.0.1
Posted by GitBox <gi...@apache.org>.
niranjannilekani commented on issue #18774:
URL: https://github.com/apache/incubator-mxnet/issues/18774#issuecomment-663639907
> cran <- getOption("repos")
> cran["dmlc"] <- "https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU"
> options(repos = cran)
> install.packages("mxnet")
Warning in install.packages :
unable to access index for repository https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/src/contrib:
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/src/contrib/PACKAGES'
Installing package into ‘C:/Users/niranjan.nilekani/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
Warning in install.packages :
unable to access index for repository https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/src/contrib:
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/src/contrib/PACKAGES'
Warning in install.packages :
package ‘mxnet’ is not available (for R version 4.0.2)
Warning in install.packages :
unable to access index for repository https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/bin/windows/contrib/4.0:
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/GPU/bin/windows/contrib/4.0/PACKAGES'
>
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