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Posted to issues@flink.apache.org by "ASF GitHub Bot (JIRA)" <ji...@apache.org> on 2017/07/26 19:52:00 UTC
[jira] [Commented] (FLINK-7273) Gelly tests with empty graphs
[ https://issues.apache.org/jira/browse/FLINK-7273?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16102190#comment-16102190 ]
ASF GitHub Bot commented on FLINK-7273:
---------------------------------------
GitHub user greghogan opened a pull request:
https://github.com/apache/flink/pull/4405
[FLINK-7273] [gelly] Gelly tests with empty graphs
## What is the purpose of the change
This was prompted by user feedback comparing Gelly's `PageRank` which noticed that zero-degree vertices (not present in the edge set) were not included in the computation. There existed an `EmptyGraph` generated which was sometimes used. This PR adds missing tests using empty edge and vertex sets for each algorithm.
## Brief change log
There exist some tests with empty graphs but the `EmptyGraph` in `AsmTestBase` contained vertices but no edges. Add a new `EmptyGraph` without vertices and test both empty graphs for each algorithm.
EmptyGraph now generates the proper TypeInformation (for Edge<> not Tuple3) which had prevented adding edges due to a union incompatibility.
GraphGeneratorUtils#vertexSet now uses a hash-combine for distinct.
`PageRank` optionally includes zero-degree vertices in the results (at a performance cost).
## Verifying this change
This change added tests and can be verified as follows: running new unit tests
## Does this pull request potentially affect one of the following parts:
- Dependencies (does it add or upgrade a dependency): (yes / **no**)
- The public API, i.e., is any changed class annotated with `@Public(Evolving)`: (yes / **no**)
- The serializers: (yes / **no** / don't know)
- The runtime per-record code paths (performance sensitive): (yes / **no** / don't know)
- Anything that affects deployment or recovery: JobManager (and its components), Checkpointing, Yarn/Mesos, ZooKeeper: (yes / **no** / don't know)
## Documentation
- Does this pull request introduce a new feature? (**yes** / no)
- If yes, how is the feature documented? (not applicable / **docs** / JavaDocs / not documented)
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/greghogan/flink 7273_gelly_tests_with_empty_graphs
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/flink/pull/4405.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #4405
----
commit 060db79d29782ba9078b1461c74019c4c68ae224
Author: Greg Hogan <co...@greghogan.com>
Date: 2017-07-26T10:23:52Z
[FLINK-7273] [gelly] Gelly tests with empty graphs
There exist some tests with empty graphs but the `EmptyGraph` in
`AsmTestBase` contained vertices but no edges. Add a new `EmptyGraph`
without vertices and test both empty graphs for each algorithm.
EmptyGraph now generates the proper TypeInformation (for Edge<> not
Tuple3) which had prevented adding edges due to a union incompatibility.
GraphGeneratorUtils#vertexSet now uses a hash-combine for distinct.
`PageRank` optionally includes zero-degree vertices in the results
(at a performance cost).
----
> Gelly tests with empty graphs
> -----------------------------
>
> Key: FLINK-7273
> URL: https://issues.apache.org/jira/browse/FLINK-7273
> Project: Flink
> Issue Type: Bug
> Components: Gelly
> Affects Versions: 1.4.0
> Reporter: Greg Hogan
> Assignee: Greg Hogan
> Priority: Minor
> Fix For: 1.4.0
>
>
> There exist some tests with empty graphs but the `EmptyGraph` in `AsmTestBase` contained vertices but no edges. Add a new `EmptyGraph` without vertices and test both empty graphs for each algorithm.
> `PageRank` should (optionally?) include zero-degree vertices in the results.
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