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Posted to issues@spark.apache.org by "Yanbo Liang (JIRA)" <ji...@apache.org> on 2016/11/18 09:01:17 UTC
[jira] [Assigned] (SPARK-18501) SparkR spark.glm error on collinear
data
[ https://issues.apache.org/jira/browse/SPARK-18501?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Yanbo Liang reassigned SPARK-18501:
-----------------------------------
Assignee: Yanbo Liang
> SparkR spark.glm error on collinear data
> -----------------------------------------
>
> Key: SPARK-18501
> URL: https://issues.apache.org/jira/browse/SPARK-18501
> Project: Spark
> Issue Type: Bug
> Components: ML, SparkR
> Reporter: Yanbo Liang
> Assignee: Yanbo Liang
>
> Spark {{GeneralizedLinearRegression}} can handle collinear data since the underlying {{WeightedLeastSquares}} can be solved by local "l-bfgs"(rather than "normal"). But the SparkR wrapper {{spark.glm}} throw errors when fitting on collinear data:
> {code}
> > df <- read.df("data/mllib/sample_binary_classification_data.txt", source = "libsvm")
> > model <- spark.glm(df, label ~ features, family = binomial(link = "logit”))
> > summary(model)
> Error in `rownames<-`(`*tmp*`, value = c("(Intercept)", "features_0", :
> length of 'dimnames' [1] not equal to array extent
> {code}
> After depth study of this error, I found it was caused the standard error of coefficients, t value and p value are not available when the underlying {{WeightedLeastSquares}} was solved by local "l-bfgs". So the coefficients matrix was generated failed.
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