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Posted to issues@arrow.apache.org by "Krisztian Szucs (JIRA)" <ji...@apache.org> on 2019/07/08 15:11:00 UTC
[jira] [Comment Edited] (ARROW-5874) [Python] pyarrow 0.14.0 macOS
wheels depend on shared libs under /usr/local/opt
[ https://issues.apache.org/jira/browse/ARROW-5874?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16880443#comment-16880443 ]
Krisztian Szucs edited comment on ARROW-5874 at 7/8/19 3:10 PM:
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According to homebrew: "Apple has deprecated use of OpenSSL in favor of its own TLS and crypto libraries."
So we cannot expect to have system openssl.
Thanks for the delocate reference, I'm taking a look. cc [~xhochy]
was (Author: kszucs):
According to homebrew: "Apple has deprecated use of OpenSSL in favor of its own TLS and crypto libraries."
So we cannot expect to have system openssl.
Thanks for the delocate reference, I'm taking a look.
> [Python] pyarrow 0.14.0 macOS wheels depend on shared libs under /usr/local/opt
> -------------------------------------------------------------------------------
>
> Key: ARROW-5874
> URL: https://issues.apache.org/jira/browse/ARROW-5874
> Project: Apache Arrow
> Issue Type: Bug
> Components: Python
> Affects Versions: 0.14.0
> Environment: macOS 10.14.5
> Anaconda Python 3.7.3
> Reporter: Michael Anselmi
> Priority: Critical
> Labels: pyarrow, wheel
>
> Hello, and congrats on the recent release of Apache Arrow 0.14.0!
> This morning I installed pyarrow 0.14.0 on my macOS 10.14.5 system like so:
> {code:java}
> python3.7 -m venv ~/virtualenv/pyarrow-0.14.0
> source ~/virtualenv/pyarrow-0.14.0/bin/activate
> pip install --upgrade pip setuptools
> pip install pyarrow # installs pyarrow-0.14.0-cp37-cp37m-macosx_10_6_intel.whl
> pip freeze --all
> # numpy==1.16.4
> # pip==19.1.1
> # pyarrow==0.14.0
> # setuptools==41.0.1
> # six==1.12.0
> {code}
> However I am unable to import pyarrow:
> {code:java}
> python -c 'import pyarrow'
> # Traceback (most recent call last):
> # File "<string>", line 1, in <module>
> # File "/Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/__init__.py", line 49, in <module>
> # from pyarrow.lib import cpu_count, set_cpu_count
> # ImportError: dlopen(/Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/lib.cpython-37m-darwin.so, 2): Library not loaded: /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib
> # Referenced from: /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow.14.dylib
> # Reason: image not found
> {code}
> pyarrow is trying to load a shared library (OpenSSL in this case) from a path under {{/usr/local/opt}} that doesn't exist; perhaps that OpenSSL had been provided by Homebrew as part of your build process? Unfortunately this makes the pyarrow 0.14.0 wheel completely unusable on my system or any system that doesn't have OpenSSL installed in that location. This is a regression from pyarrow 0.13.0 as those wheels "just worked".
> Additional diagnostic output below. I ran {{otool -L}} on each {{.dylib}} and {{.so}} file in {{/Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow}} and included the output for those with dependencies under {{/usr/local/opt}}:
> {code:java}
> otool -L /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow.14.dylib
> # /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow.14.dylib:
> # @rpath/libarrow.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/local/opt/openssl/lib/libssl.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.8)
> # @rpath/libarrow_boost_system.dylib (compatibility version 0.0.0, current version 0.0.0)
> # @rpath/libarrow_boost_filesystem.dylib (compatibility version 0.0.0, current version 0.0.0)
> # @rpath/libarrow_boost_regex.dylib (compatibility version 0.0.0, current version 0.0.0)
> # /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
> # /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
> otool -L /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow_flight.14.dylib
> # /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow_flight.14.dylib:
> # @rpath/libarrow_flight.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # @rpath/libarrow.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/local/opt/openssl/lib/libssl.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
> # /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
> otool -L /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow_python.14.dylib
> # /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libarrow_python.14.dylib:
> # @rpath/libarrow_python.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
> # /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1349.64.0)
> # @rpath/libarrow_flight.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # @rpath/libarrow.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/local/opt/openssl/lib/libssl.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
> otool -L /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libgandiva.14.dylib
> # /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libgandiva.14.dylib:
> # @rpath/libgandiva.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # @rpath/libarrow.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/local/opt/openssl/lib/libssl.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.8)
> # /usr/lib/libncurses.5.4.dylib (compatibility version 5.4.0, current version 5.4.0)
> # /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
> # /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
> otool -L /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libplasma.14.dylib
> # /Users/manselmi/virtualenv/pyarrow-0.14.0/lib/python3.7/site-packages/pyarrow/libplasma.14.dylib:
> # @rpath/libplasma.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # @rpath/libarrow.14.dylib (compatibility version 14.0.0, current version 14.0.0)
> # /usr/local/opt/openssl/lib/libssl.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib (compatibility version 1.0.0, current version 1.0.0)
> # /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
> # /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
> {code}
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