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Posted to commits@uima.apache.org by sc...@apache.org on 2006/12/04 17:50:27 UTC

svn commit: r482245 [3/8] - in /incubator/uima/uimaj/trunk/uima-docbooks/src: docbook/ docbook/overview_and_setup/ docbook/tutorials_and_users_guides/ olink/ olink/overview_and_setup/ olink/references/ olink/tools/ olink/tutorials_and_users_guides/ sty...

Added: incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/htmlsingle-target.db
URL: http://svn.apache.org/viewvc/incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/htmlsingle-target.db?view=auto&rev=482245
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--- incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/htmlsingle-target.db (added)
+++ incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/htmlsingle-target.db Mon Dec  4 08:50:24 2006
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+<div element="book" href="#d0e2" number="" lang="en">
+   <ttl>Overview &amp; Setup</ttl>
+   <xreftext>Overview &amp; Setup</xreftext>
+   <div element="chapter" href="#ugr.project_overview" number="1" targetptr="ugr.project_overview">
+      <ttl>Apache UIMA Project Overview</ttl>
+      <xreftext>Chapter 1, <i>Apache UIMA Project Overview</i>
+      </xreftext>
+      <div element="section" href="#ugr.project_overview_doc_overview" number="1.1" targetptr="ugr.project_overview_doc_overview">
+         <ttl>Apache UIMA Project Documentation Overview</ttl>
+         <xreftext>Section 1.1, “Apache UIMA Project Documentation Overview”</xreftext>
+         <div element="section" href="#ugr.project_overview_overview" number="" targetptr="ugr.project_overview_overview">
+            <ttl>Overviews</ttl>
+            <xreftext>the section called “Overviews”</xreftext>
+         </div>
+         <div element="section" href="#ugr.project_overview_setup" number="" targetptr="ugr.project_overview_setup">
+            <ttl>Eclipse Tooling Installation and Setup</ttl>
+            <xreftext>the section called “Eclipse Tooling Installation and Setup”</xreftext>
+         </div>
+         <div element="section" href="#ugr.project_overview_tutorials_dev_guides" number="" targetptr="ugr.project_overview_tutorials_dev_guides">
+            <ttl>Tutorials and Developer's Guides</ttl>
+            <xreftext>the section called “Tutorials and Developer's Guides”</xreftext>
+            <obj element="row" href="#ugr.project_overview_tutorial_annotator" number="" targetptr="ugr.project_overview_tutorial_annotator">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tutorial_cpe" number="" targetptr="ugr.project_overview_tutorial_cpe">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tutorial_application_development" number="" targetptr="ugr.project_overview_tutorial_application_development">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_flow_controller" number="" targetptr="ugr.project_overview_guide_flow_controller">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_multiple_sofas" number="" targetptr="ugr.project_overview_guide_multiple_sofas">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_cas_multiplier" number="" targetptr="ugr.project_overview_guide_cas_multiplier">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xmi_emf" number="" targetptr="ugr.project_overview_xmi_emf">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#ugr.project_overview_tool_guides" number="" targetptr="ugr.project_overview_tool_guides">
+            <ttl>Tools Users' Guides</ttl>
+            <xreftext>the section called “Tools Users' Guides”</xreftext>
+            <obj element="row" href="#ugr.project_overview_tools_component_descriptor_editor" number="" targetptr="ugr.project_overview_tools_component_descriptor_editor">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_cpe_configurator" number="" targetptr="ugr.project_overview_tools_cpe_configurator">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_packager" number="" targetptr="ugr.project_overview_tools_pear_packager">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_installer" number="" targetptr="ugr.project_overview_tools_pear_installer">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_merger" number="" targetptr="ugr.project_overview_tools_pear_merger">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_document_analyzer" number="" targetptr="ugr.project_overview_tools_document_analyzer">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_cas_visual_debugger" number="" targetptr="ugr.project_overview_tools_cas_visual_debugger">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_jcasgen" number="" targetptr="ugr.project_overview_tools_jcasgen">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_xml_cas_viewer" number="" targetptr="ugr.project_overview_tools_xml_cas_viewer">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#ugr.project_overview_reference" number="" targetptr="ugr.project_overview_reference">
+            <ttl>References</ttl>
+            <xreftext>the section called “References”</xreftext>
+            <obj element="row" href="#ugr.project_overview_xml_ref_component_descriptor" number="" targetptr="ugr.project_overview_xml_ref_component_descriptor">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xml_ref_collection_processing_engine_descriptor" number="" targetptr="ugr.project_overview_xml_ref_collection_processing_engine_descriptor">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_javadocs" number="" targetptr="ugr.project_overview_javadocs">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_cas" number="" targetptr="ugr.project_overview_cas">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_jcas" number="" targetptr="ugr.project_overview_jcas">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_ref_pear" number="" targetptr="ugr.project_overview_ref_pear">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xmi_cas_serialization" number="" targetptr="ugr.project_overview_xmi_cas_serialization">
+               <ttl>???TITLE???</ttl>
+               <xreftext>???</xreftext>
+            </obj>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_doc_use" number="1.2" targetptr="ugr.project_overview_doc_use">
+         <ttl>Using the Documentation to get started with the UIMA SDK</ttl>
+         <xreftext>Section 1.2, “Using the Documentation to get started with the UIMA SDK”</xreftext>
+      </div>
+      <div element="section" href="#ugr.project_overview_whats_new" number="1.3" targetptr="ugr.project_overview_whats_new">
+         <ttl>What's new in Apache UIMA Version 2.0</ttl>
+         <xreftext>Section 1.3, “What's new in Apache UIMA Version 2.0”</xreftext>
+         <div element="section" href="#ugr.project_overview_new_capabilities" number="" targetptr="ugr.project_overview_new_capabilities">
+            <ttl>New Capabilities</ttl>
+            <xreftext>the section called “New Capabilities”</xreftext>
+            <div element="section" href="#ugr.project_overview_new_data_types" number="" targetptr="ugr.project_overview_new_data_types">
+               <ttl>New Primitive data types</ttl>
+               <xreftext>the section called “New Primitive data types”</xreftext>
+            </div>
+            <div element="section" href="#d0e444" number="">
+               <ttl>Simpler Analysis Engines and CASes</ttl>
+               <xreftext>the section called “Simpler Analysis Engines and CASes”</xreftext>
+            </div>
+            <div element="section" href="#d0e451" number="">
+               <ttl>Sofas and CAS Views simplified</ttl>
+               <xreftext>the section called “Sofas and CAS Views simplified”</xreftext>
+            </div>
+            <div element="section" href="#d0e456" number="">
+               <ttl>Analysis Component generalized to support multiple new CAS
+          outputs</ttl>
+               <xreftext>the section called “Analysis Component generalized to support multiple new CAS
+          outputs”</xreftext>
+            </div>
+            <div element="section" href="#d0e463" number="">
+               <ttl>User-customized Flow Controllers</ttl>
+               <xreftext>the section called “User-customized Flow Controllers”</xreftext>
+            </div>
+            <div element="section" href="#d0e470" number="">
+               <ttl>Search Engine</ttl>
+               <xreftext>the section called “Search Engine”</xreftext>
+            </div>
+         </div>
+         <div element="section" href="#ugr.project_overview_backwards_compatibility" number="" targetptr="ugr.project_overview_backwards_compatibility">
+            <ttl>Backwards Compatibility</ttl>
+            <xreftext>the section called “Backwards Compatibility”</xreftext>
+         </div>
+         <div element="section" href="#d0e501" number="">
+            <ttl>Other Changes</ttl>
+            <xreftext>the section called “Other Changes”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_summary" number="1.4" targetptr="ugr.project_overview_summary">
+         <ttl>Apache UIMA SDK Summary</ttl>
+         <xreftext>Section 1.4, “Apache UIMA SDK Summary”</xreftext>
+         <div element="section" href="#d0e513" number="">
+            <ttl>General</ttl>
+            <xreftext>the section called “General”</xreftext>
+         </div>
+         <div element="section" href="#d0e522" number="">
+            <ttl>Programming Language Support</ttl>
+            <xreftext>the section called “Programming Language Support”</xreftext>
+         </div>
+         <div element="section" href="#d0e533" number="">
+            <ttl>Multi-Modal Support</ttl>
+            <xreftext>the section called “Multi-Modal Support”</xreftext>
+         </div>
+         <div element="section" href="#d0e540" number="">
+            <ttl>Semantic Search Components</ttl>
+            <xreftext>the section called “Semantic Search Components”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_summary_sdk_capabilities" number="1.5" targetptr="ugr.project_overview_summary_sdk_capabilities">
+         <ttl>Summary of UIMA SDK Capabilities</ttl>
+         <xreftext>Section 1.5, “Summary of UIMA SDK Capabilities”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.conceptual_overview" number="2" targetptr="ugr.conceptual_overview">
+      <ttl>UIMA Conceptual Overview</ttl>
+      <xreftext>Chapter 2, <i>UIMA Conceptual Overview</i>
+      </xreftext>
+      <div element="section" href="#ugr.conceptual_overview.uima_introduction" number="2.1" targetptr="ugr.conceptual_overview.uima_introduction">
+         <ttl>UIMA Introduction</ttl>
+         <xreftext>Section 2.1, “UIMA Introduction”</xreftext>
+         <obj element="figure" href="#d0e734" number="2.1">
+            <ttl>UIMA helps you build the bridge between the unstructured and structured
+        worlds</ttl>
+            <xreftext>Figure 2.1, “UIMA helps you build the bridge between the unstructured and structured
+        worlds”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview_architecture_framework_sdk" number="2.2" targetptr="ugr.conceptual_overview_architecture_framework_sdk">
+         <ttl>The Architecture, the Framework and the SDK</ttl>
+         <xreftext>Section 2.2, “The Architecture, the Framework and the SDK”</xreftext>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview.analysis_basics" number="2.3" targetptr="ugr.conceptual_overview.analysis_basics">
+         <ttl>Analysis Basics</ttl>
+         <xreftext>Section 2.3, “Analysis Basics”</xreftext>
+         <div element="section" href="#d0e805" number="">
+            <ttl>Analysis Engines, Annotators and Analysis Results</ttl>
+            <xreftext>the section called “Analysis Engines, Annotators and Analysis Results”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.metadata_in_cas" number="2.2" targetptr="ugr.conceptual_overview.metadata_in_cas">
+               <ttl>Objects represented in the Common Analysis Structure (CAS)</ttl>
+               <xreftext>Figure 2.2, “Objects represented in the Common Analysis Structure (CAS)”</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#d0e879" number="">
+            <ttl>Representing Analysis Results in the CAS</ttl>
+            <xreftext>the section called “Representing Analysis Results in the CAS”</xreftext>
+            <div element="section" href="#d0e944" number="">
+               <ttl>The Annotation Type</ttl>
+               <xreftext>the section called “The Annotation Type”</xreftext>
+            </div>
+            <div element="section" href="#d0e973" number="">
+               <ttl>Not Just Annotations</ttl>
+               <xreftext>the section called “Not Just Annotations”</xreftext>
+            </div>
+            <div element="section" href="#d0e1007" number="">
+               <ttl>Multiple Views within a CAS</ttl>
+               <xreftext>the section called “Multiple Views within a CAS”</xreftext>
+            </div>
+         </div>
+         <div element="section" href="#d0e1023" number="">
+            <ttl>Interacting with the CAS and External Resources</ttl>
+            <xreftext>the section called “Interacting with the CAS and External Resources”</xreftext>
+         </div>
+         <div element="section" href="#d0e1043" number="">
+            <ttl>Component Descriptors</ttl>
+            <xreftext>the section called “Component Descriptors”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview.aggregate_analysis_engines" number="2.4" targetptr="ugr.conceptual_overview.aggregate_analysis_engines">
+         <ttl>Aggregate Analysis Engines</ttl>
+         <xreftext>Section 2.4, “Aggregate Analysis Engines”</xreftext>
+         <obj element="figure" href="#ugr.conceptual_overview.sample_aggregate" number="2.3" targetptr="ugr.conceptual_overview.sample_aggregate">
+            <ttl>Sample Aggregate Analysis Engine</ttl>
+            <xreftext>Figure 2.3, “Sample Aggregate Analysis Engine”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#d0e1143" number="2.5">
+         <ttl>Application Building and Collection Processing</ttl>
+         <xreftext>Section 2.5, “Application Building and Collection Processing”</xreftext>
+         <div element="section" href="#d0e1151" number="">
+            <ttl>Using the framework from an Application</ttl>
+            <xreftext>the section called “Using the framework from an Application”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.application_factory_ae" number="2.4" targetptr="ugr.conceptual_overview.application_factory_ae">
+               <ttl>Using UIMA Framework to create and interact with an Analysis Engine</ttl>
+               <xreftext>Figure 2.4, “Using UIMA Framework to create and interact with an Analysis Engine”</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#d0e1182" number="">
+            <ttl>Graduating to Collection Processing</ttl>
+            <xreftext>the section called “Graduating to Collection Processing”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.fig.cpe" number="2.5" targetptr="ugr.conceptual_overview.fig.cpe">
+               <ttl>High-Level UIMA Component Architecture from Source to Sink</ttl>
+               <xreftext>Figure 2.5, “High-Level UIMA Component Architecture from Source to Sink”</xreftext>
+            </obj>
+            <obj element="figure" href="#ugr.conceptual_overview.fig.cpm" number="2.6" targetptr="ugr.conceptual_overview.fig.cpm">
+               <ttl>Collection Processing Manager in UIMA Framework</ttl>
+               <xreftext>Figure 2.6, “Collection Processing Manager in UIMA Framework”</xreftext>
+            </obj>
+         </div>
+      </div>
+      <div element="section" href="#d0e1285" number="2.6">
+         <ttl>Exploiting Analysis Results</ttl>
+         <xreftext>Section 2.6, “Exploiting Analysis Results”</xreftext>
+         <div element="section" href="#d0e1293" number="">
+            <ttl>Semantic Search</ttl>
+            <xreftext>the section called “Semantic Search”</xreftext>
+         </div>
+         <div element="section" href="#d0e1351" number="">
+            <ttl>Databases</ttl>
+            <xreftext>the section called “Databases”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#d0e1356" number="2.7">
+         <ttl>Multimodal Processing in UIMA</ttl>
+         <xreftext>Section 2.7, “Multimodal Processing in UIMA”</xreftext>
+         <obj element="figure" href="#ugr.conceptual_overview.fig.multiple_sofas" number="2.7" targetptr="ugr.conceptual_overview.fig.multiple_sofas">
+            <ttl>Multiple Sofas in support of multi-modal analysis of an audio Stream. Some
+        engines work on the audio “<span class="quote">view</span>”, some on the text
+        “<span class="quote">view</span>” and some on both.</ttl>
+            <xreftext>Figure 2.7, “Multiple Sofas in support of multi-modal analysis of an audio Stream. Some
+        engines work on the audio “<span class="quote">view</span>”, some on the text
+        “<span class="quote">view</span>” and some on both.”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#d0e1411" number="2.8">
+         <ttl>Next Steps</ttl>
+         <xreftext>Section 2.8, “Next Steps”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.eclipse_setup" number="3" targetptr="ugr.eclipse_setup">
+      <ttl>Setting up Eclipse IDE to work with UIMA</ttl>
+      <xreftext>Chapter 3, <i>Setting up Eclipse IDE to work with UIMA</i>
+      </xreftext>
+      <div element="section" href="#d0e1462" number="3.1">
+         <ttl>Installation</ttl>
+         <xreftext>Section 3.1, “Installation”</xreftext>
+         <div element="section" href="#d0e1465" number="">
+            <ttl>Install Eclipse</ttl>
+            <xreftext>the section called “Install Eclipse”</xreftext>
+         </div>
+         <div element="section" href="#d0e1486" number="">
+            <ttl>Install additional Eclipse component: EMF</ttl>
+            <xreftext>the section called “Install additional Eclipse component: EMF”</xreftext>
+         </div>
+         <div element="section" href="#d0e1538" number="">
+            <ttl>Install the UIMA SDK</ttl>
+            <xreftext>the section called “Install the UIMA SDK”</xreftext>
+         </div>
+         <div element="section" href="#d0e1545" number="">
+            <ttl>Install the UIMA Eclipse Plugins</ttl>
+            <xreftext>the section called “Install the UIMA Eclipse Plugins”</xreftext>
+         </div>
+         <div element="section" href="#d0e1550" number="">
+            <ttl>Start Eclipse</ttl>
+            <xreftext>the section called “Start Eclipse”</xreftext>
+            <div element="section" href="#d0e1566" number="">
+               <ttl>Special startup parameter for Eclipse: -clean</ttl>
+               <xreftext>the section called “Special startup parameter for Eclipse: -clean”</xreftext>
+            </div>
+         </div>
+      </div>
+      <div element="section" href="#ugr.eclipse_setup.example_code" number="3.2" targetptr="ugr.eclipse_setup.example_code">
+         <ttl>Setting up Eclipse to view Example Code</ttl>
+         <xreftext>Section 3.2, “Setting up Eclipse to view Example Code”</xreftext>
+      </div>
+      <div element="section" href="#d0e1669" number="3.3">
+         <ttl>Running external tools from Eclipse</ttl>
+         <xreftext>Section 3.3, “Running external tools from Eclipse”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.faqs" number="4" targetptr="ugr.faqs">
+      <ttl>UIMA Frequently Asked Questions (FAQs)</ttl>
+      <xreftext>Chapter 4, <i>UIMA Frequently Asked Questions (FAQs)</i>
+      </xreftext>
+   </div>
+   <div element="chapter" href="#ugr.glossary" number="5" targetptr="ugr.glossary">
+      <ttl>Glossary of Key Terms and Concepts</ttl>
+      <xreftext>Chapter 5, <i>Glossary of Key Terms and Concepts</i>
+      </xreftext>
+      <obj element="glossentry" href="#ugr.glossary.aggregate" number="" targetptr="ugr.glossary.aggregate">
+         <ttl>Aggregate Analysis Engine</ttl>
+         <xreftext>Aggregate Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.analysis_engine" number="" targetptr="ugr.glossary.analysis_engine">
+         <ttl>Analysis Engine</ttl>
+         <xreftext>Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.annotation" number="" targetptr="ugr.glossary.annotation">
+         <ttl>Annotation</ttl>
+         <xreftext>Annotation</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.annotator" number="" targetptr="ugr.glossary.annotator">
+         <ttl>Annotator</ttl>
+         <xreftext>Annotator</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.application" number="" targetptr="ugr.glossary.application">
+         <ttl>Application</ttl>
+         <xreftext>Application</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas" number="" targetptr="ugr.glossary.cas">
+         <ttl>CAS</ttl>
+         <xreftext>CAS</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_consumer" number="" targetptr="ugr.glossary.cas_consumer">
+         <ttl>CAS Consumer</ttl>
+         <xreftext>CAS Consumer</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_initializer" number="" targetptr="ugr.glossary.cas_initializer">
+         <ttl>CAS Initializer (deprecated)</ttl>
+         <xreftext>CAS Initializer (deprecated)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_multiplier" number="" targetptr="ugr.glossary.cas_multiplier">
+         <ttl>CAS Multiplier</ttl>
+         <xreftext>CAS Multiplier</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_processor" number="" targetptr="ugr.glossary.cas_processor">
+         <ttl>CAS Processor</ttl>
+         <xreftext>CAS Processor</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_view" number="" targetptr="ugr.glossary.cas_view">
+         <ttl>CAS View</ttl>
+         <xreftext>CAS View</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cde" number="" targetptr="ugr.glossary.cde">
+         <ttl>CDE</ttl>
+         <xreftext>CDE</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cpe" number="" targetptr="ugr.glossary.cpe">
+         <ttl>Collection Processing Engine (CPE)</ttl>
+         <xreftext>Collection Processing Engine (CPE)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cpm" number="" targetptr="ugr.glossary.cpm">
+         <ttl>Collection Processing Manager (CPM)</ttl>
+         <xreftext>Collection Processing Manager (CPM)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.collection_reader" number="" targetptr="ugr.glossary.collection_reader">
+         <ttl>Collection Reader</ttl>
+         <xreftext>Collection Reader</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.fact_search" number="" targetptr="ugr.glossary.fact_search">
+         <ttl>Fact Search</ttl>
+         <xreftext>Fact Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.feature" number="" targetptr="ugr.glossary.feature">
+         <ttl>Feature</ttl>
+         <xreftext>Feature</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.flow_controller" number="" targetptr="ugr.glossary.flow_controller">
+         <ttl>Flow Controller</ttl>
+         <xreftext>Flow Controller</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.hybrid_analysis_engine" number="" targetptr="ugr.glossary.hybrid_analysis_engine">
+         <ttl>Hybrid Analysis Engine</ttl>
+         <xreftext>Hybrid Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.index" number="" targetptr="ugr.glossary.index">
+         <ttl>Index</ttl>
+         <xreftext>Index</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.jcas" number="" targetptr="ugr.glossary.jcas">
+         <ttl>JCas</ttl>
+         <xreftext>JCas</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.keyword_search" number="" targetptr="ugr.glossary.keyword_search">
+         <ttl>Keyword Search</ttl>
+         <xreftext>Keyword Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.knowledge_base" number="" targetptr="ugr.glossary.knowledge_base">
+         <ttl>Knowledge Base</ttl>
+         <xreftext>Knowledge Base</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.loosely_coupled_analysis_engine" number="" targetptr="ugr.glossary.loosely_coupled_analysis_engine">
+         <ttl>Loosely-Coupled Analysis Engine</ttl>
+         <xreftext>Loosely-Coupled Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.ontology" number="" targetptr="ugr.glossary.ontology">
+         <ttl/>
+         <xreftext/>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.pear" number="" targetptr="ugr.glossary.pear">
+         <ttl>PEAR</ttl>
+         <xreftext>PEAR</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.primitive_analysis_engine" number="" targetptr="ugr.glossary.primitive_analysis_engine">
+         <ttl>Primitive Analysis Engine</ttl>
+         <xreftext>Primitive Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.semantic_search" number="" targetptr="ugr.glossary.semantic_search">
+         <ttl>Semantic Search</ttl>
+         <xreftext>Semantic Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.structured_information" number="" targetptr="ugr.glossary.structured_information">
+         <ttl>Structured Information</ttl>
+         <xreftext>Structured Information</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.sofa" number="" targetptr="ugr.glossary.sofa">
+         <ttl>Subject of Analysis (Sofa)</ttl>
+         <xreftext>Subject of Analysis (Sofa)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.tightly_coupled_analysis_engine" number="" targetptr="ugr.glossary.tightly_coupled_analysis_engine">
+         <ttl>Tightly-Coupled Analysis Engine</ttl>
+         <xreftext>Tightly-Coupled Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.type" number="" targetptr="ugr.glossary.type">
+         <ttl>Type</ttl>
+         <xreftext>Type</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.type_system" number="" targetptr="ugr.glossary.type_system">
+         <ttl>Type System</ttl>
+         <xreftext>Type System</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.unstructured_information" number="" targetptr="ugr.glossary.unstructured_information">
+         <ttl>Unstructured Information</ttl>
+         <xreftext>Unstructured Information</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima" number="" targetptr="ugr.glossary.uima">
+         <ttl>UIMA</ttl>
+         <xreftext>UIMA</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima_java_framework" number="" targetptr="ugr.glossary.uima_java_framework">
+         <ttl>UIMA Java Framework</ttl>
+         <xreftext>UIMA Java Framework</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima_sdk" number="" targetptr="ugr.glossary.uima_sdk">
+         <ttl>UIMA Software Development Kit (SDK)</ttl>
+         <xreftext>UIMA Software Development Kit (SDK)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.xcas" number="" targetptr="ugr.glossary.xcas">
+         <ttl>XCAS</ttl>
+         <xreftext>XCAS</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.xmi" number="" targetptr="ugr.glossary.xmi">
+         <ttl>XML Metadata Interchange (XMI)</ttl>
+         <xreftext>XML Metadata Interchange (XMI)</xreftext>
+      </obj>
+   </div>
+</div>
\ No newline at end of file

Added: incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/pdf-target.db
URL: http://svn.apache.org/viewvc/incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/pdf-target.db?view=auto&rev=482245
==============================================================================
--- incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/pdf-target.db (added)
+++ incubator/uima/uimaj/trunk/uima-docbooks/src/olink/references/pdf-target.db Mon Dec  4 08:50:24 2006
@@ -0,0 +1,517 @@
+<div element="book" href="#d0e2" number="" lang="en">
+   <ttl>Overview &amp; Setup</ttl>
+   <xreftext>Overview &amp; Setup</xreftext>
+   <div element="chapter" href="#ugr.project_overview" number="1" targetptr="ugr.project_overview">
+      <ttl>Apache UIMA Project Overview</ttl>
+      <xreftext>Chapter 1, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" font-style="italic">Apache UIMA Project Overview</fo:inline>
+      </xreftext>
+      <div element="section" href="#ugr.project_overview_doc_overview" number="1.1" targetptr="ugr.project_overview_doc_overview">
+         <ttl>Apache UIMA Project Documentation Overview</ttl>
+         <xreftext>Section 1.1, “Apache UIMA Project Documentation Overview”</xreftext>
+         <div element="section" href="#ugr.project_overview_overview" number="1.1.1" targetptr="ugr.project_overview_overview">
+            <ttl>Overviews</ttl>
+            <xreftext>Section 1.1.1, “Overviews”</xreftext>
+         </div>
+         <div element="section" href="#ugr.project_overview_setup" number="1.1.2" targetptr="ugr.project_overview_setup">
+            <ttl>Eclipse Tooling Installation and Setup</ttl>
+            <xreftext>Section 1.1.2, “Eclipse Tooling Installation and Setup”</xreftext>
+         </div>
+         <div element="section" href="#ugr.project_overview_tutorials_dev_guides" number="1.1.3" targetptr="ugr.project_overview_tutorials_dev_guides">
+            <ttl>Tutorials and Developer's Guides</ttl>
+            <xreftext>Section 1.1.3, “Tutorials and Developer's Guides”</xreftext>
+            <obj element="row" href="#ugr.project_overview_tutorial_annotator" number="" targetptr="ugr.project_overview_tutorial_annotator">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tutorial_cpe" number="" targetptr="ugr.project_overview_tutorial_cpe">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tutorial_application_development" number="" targetptr="ugr.project_overview_tutorial_application_development">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_flow_controller" number="" targetptr="ugr.project_overview_guide_flow_controller">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_multiple_sofas" number="" targetptr="ugr.project_overview_guide_multiple_sofas">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_guide_cas_multiplier" number="" targetptr="ugr.project_overview_guide_cas_multiplier">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xmi_emf" number="" targetptr="ugr.project_overview_xmi_emf">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+         </div>
+         <div element="section" href="#ugr.project_overview_tool_guides" number="1.1.4" targetptr="ugr.project_overview_tool_guides">
+            <ttl>Tools Users' Guides</ttl>
+            <xreftext>Section 1.1.4, “Tools Users' Guides”</xreftext>
+            <obj element="row" href="#ugr.project_overview_tools_component_descriptor_editor" number="" targetptr="ugr.project_overview_tools_component_descriptor_editor">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_cpe_configurator" number="" targetptr="ugr.project_overview_tools_cpe_configurator">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_packager" number="" targetptr="ugr.project_overview_tools_pear_packager">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_installer" number="" targetptr="ugr.project_overview_tools_pear_installer">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_pear_merger" number="" targetptr="ugr.project_overview_tools_pear_merger">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_document_analyzer" number="" targetptr="ugr.project_overview_tools_document_analyzer">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_cas_visual_debugger" number="" targetptr="ugr.project_overview_tools_cas_visual_debugger">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_jcasgen" number="" targetptr="ugr.project_overview_tools_jcasgen">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_tools_xml_cas_viewer" number="" targetptr="ugr.project_overview_tools_xml_cas_viewer">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+         </div>
+         <div element="section" href="#ugr.project_overview_reference" number="1.1.5" targetptr="ugr.project_overview_reference">
+            <ttl>References</ttl>
+            <xreftext>Section 1.1.5, “References”</xreftext>
+            <obj element="row" href="#ugr.project_overview_xml_ref_component_descriptor" number="" targetptr="ugr.project_overview_xml_ref_component_descriptor">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xml_ref_collection_processing_engine_descriptor" number="" targetptr="ugr.project_overview_xml_ref_collection_processing_engine_descriptor">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_javadocs" number="" targetptr="ugr.project_overview_javadocs">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_cas" number="" targetptr="ugr.project_overview_cas">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_jcas" number="" targetptr="ugr.project_overview_jcas">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_ref_pear" number="" targetptr="ugr.project_overview_ref_pear">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+            <obj element="row" href="#ugr.project_overview_xmi_cas_serialization" number="" targetptr="ugr.project_overview_xmi_cas_serialization">
+               <ttl>???TITLE???</ttl>
+               <xreftext/>
+            </obj>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_doc_use" number="1.2" targetptr="ugr.project_overview_doc_use">
+         <ttl>Using the Documentation to get started with the UIMA SDK</ttl>
+         <xreftext>Section 1.2, “Using the Documentation to get started with the UIMA SDK”</xreftext>
+      </div>
+      <div element="section" href="#ugr.project_overview_whats_new" number="1.3" targetptr="ugr.project_overview_whats_new">
+         <ttl>What's new in Apache UIMA Version 2.0</ttl>
+         <xreftext>Section 1.3, “What's new in Apache UIMA Version 2.0”</xreftext>
+         <div element="section" href="#ugr.project_overview_new_capabilities" number="1.3.1" targetptr="ugr.project_overview_new_capabilities">
+            <ttl>New Capabilities</ttl>
+            <xreftext>Section 1.3.1, “New Capabilities”</xreftext>
+            <div element="section" href="#ugr.project_overview_new_data_types" number="1.3.1.1" targetptr="ugr.project_overview_new_data_types">
+               <ttl>New Primitive data types</ttl>
+               <xreftext>Section 1.3.1.1, “New Primitive data types”</xreftext>
+            </div>
+            <div element="section" href="#d0e444" number="1.3.1.2">
+               <ttl>Simpler Analysis Engines and CASes</ttl>
+               <xreftext>Section 1.3.1.2, “Simpler Analysis Engines and CASes”</xreftext>
+            </div>
+            <div element="section" href="#d0e451" number="1.3.1.3">
+               <ttl>Sofas and CAS Views simplified</ttl>
+               <xreftext>Section 1.3.1.3, “Sofas and CAS Views simplified”</xreftext>
+            </div>
+            <div element="section" href="#d0e456" number="1.3.1.4">
+               <ttl>Analysis Component generalized to support multiple new CAS
+          outputs</ttl>
+               <xreftext>Section 1.3.1.4, “Analysis Component generalized to support multiple new CAS
+          outputs”</xreftext>
+            </div>
+            <div element="section" href="#d0e463" number="1.3.1.5">
+               <ttl>User-customized Flow Controllers</ttl>
+               <xreftext>Section 1.3.1.5, “User-customized Flow Controllers”</xreftext>
+            </div>
+            <div element="section" href="#d0e470" number="1.3.1.6">
+               <ttl>Search Engine</ttl>
+               <xreftext>Section 1.3.1.6, “Search Engine”</xreftext>
+            </div>
+         </div>
+         <div element="section" href="#ugr.project_overview_backwards_compatibility" number="1.3.2" targetptr="ugr.project_overview_backwards_compatibility">
+            <ttl>Backwards Compatibility</ttl>
+            <xreftext>Section 1.3.2, “Backwards Compatibility”</xreftext>
+         </div>
+         <div element="section" href="#d0e501" number="1.3.3">
+            <ttl>Other Changes</ttl>
+            <xreftext>Section 1.3.3, “Other Changes”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_summary" number="1.4" targetptr="ugr.project_overview_summary">
+         <ttl>Apache UIMA SDK Summary</ttl>
+         <xreftext>Section 1.4, “Apache UIMA SDK Summary”</xreftext>
+         <div element="section" href="#d0e513" number="1.4.1">
+            <ttl>General</ttl>
+            <xreftext>Section 1.4.1, “General”</xreftext>
+         </div>
+         <div element="section" href="#d0e522" number="1.4.2">
+            <ttl>Programming Language Support</ttl>
+            <xreftext>Section 1.4.2, “Programming Language Support”</xreftext>
+         </div>
+         <div element="section" href="#d0e533" number="1.4.3">
+            <ttl>Multi-Modal Support</ttl>
+            <xreftext>Section 1.4.3, “Multi-Modal Support”</xreftext>
+         </div>
+         <div element="section" href="#d0e540" number="1.4.4">
+            <ttl>Semantic Search Components</ttl>
+            <xreftext>Section 1.4.4, “Semantic Search Components”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.project_overview_summary_sdk_capabilities" number="1.5" targetptr="ugr.project_overview_summary_sdk_capabilities">
+         <ttl>Summary of UIMA SDK Capabilities</ttl>
+         <xreftext>Section 1.5, “Summary of UIMA SDK Capabilities”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.conceptual_overview" number="2" targetptr="ugr.conceptual_overview">
+      <ttl>UIMA Conceptual Overview</ttl>
+      <xreftext>Chapter 2, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" font-style="italic">UIMA Conceptual Overview</fo:inline>
+      </xreftext>
+      <div element="section" href="#ugr.conceptual_overview.uima_introduction" number="2.1" targetptr="ugr.conceptual_overview.uima_introduction">
+         <ttl>UIMA Introduction</ttl>
+         <xreftext>Section 2.1, “UIMA Introduction”</xreftext>
+         <obj element="figure" href="#d0e734" number="2.1">
+            <ttl>UIMA helps you build the bridge between the unstructured and structured
+        worlds</ttl>
+            <xreftext>Figure 2.1, “UIMA helps you build the bridge between the unstructured and structured
+        worlds”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview_architecture_framework_sdk" number="2.2" targetptr="ugr.conceptual_overview_architecture_framework_sdk">
+         <ttl>The Architecture, the Framework and the SDK</ttl>
+         <xreftext>Section 2.2, “The Architecture, the Framework and the SDK”</xreftext>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview.analysis_basics" number="2.3" targetptr="ugr.conceptual_overview.analysis_basics">
+         <ttl>Analysis Basics</ttl>
+         <xreftext>Section 2.3, “Analysis Basics”</xreftext>
+         <div element="section" href="#d0e805" number="2.3.1">
+            <ttl>Analysis Engines, Annotators and Analysis Results</ttl>
+            <xreftext>Section 2.3.1, “Analysis Engines, Annotators and Analysis Results”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.metadata_in_cas" number="2.2" targetptr="ugr.conceptual_overview.metadata_in_cas">
+               <ttl>Objects represented in the Common Analysis Structure (CAS)</ttl>
+               <xreftext>Figure 2.2, “Objects represented in the Common Analysis Structure (CAS)”</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#d0e879" number="2.3.2">
+            <ttl>Representing Analysis Results in the CAS</ttl>
+            <xreftext>Section 2.3.2, “Representing Analysis Results in the CAS”</xreftext>
+            <div element="section" href="#d0e944" number="2.3.2.1">
+               <ttl>The Annotation Type</ttl>
+               <xreftext>Section 2.3.2.1, “The Annotation Type”</xreftext>
+            </div>
+            <div element="section" href="#d0e973" number="2.3.2.2">
+               <ttl>Not Just Annotations</ttl>
+               <xreftext>Section 2.3.2.2, “Not Just Annotations”</xreftext>
+            </div>
+            <div element="section" href="#d0e1007" number="2.3.2.3">
+               <ttl>Multiple Views within a CAS</ttl>
+               <xreftext>Section 2.3.2.3, “Multiple Views within a CAS”</xreftext>
+            </div>
+         </div>
+         <div element="section" href="#d0e1023" number="2.3.3">
+            <ttl>Interacting with the CAS and External Resources</ttl>
+            <xreftext>Section 2.3.3, “Interacting with the CAS and External Resources”</xreftext>
+         </div>
+         <div element="section" href="#d0e1043" number="2.3.4">
+            <ttl>Component Descriptors</ttl>
+            <xreftext>Section 2.3.4, “Component Descriptors”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#ugr.conceptual_overview.aggregate_analysis_engines" number="2.4" targetptr="ugr.conceptual_overview.aggregate_analysis_engines">
+         <ttl>Aggregate Analysis Engines</ttl>
+         <xreftext>Section 2.4, “Aggregate Analysis Engines”</xreftext>
+         <obj element="figure" href="#ugr.conceptual_overview.sample_aggregate" number="2.3" targetptr="ugr.conceptual_overview.sample_aggregate">
+            <ttl>Sample Aggregate Analysis Engine</ttl>
+            <xreftext>Figure 2.3, “Sample Aggregate Analysis Engine”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#d0e1143" number="2.5">
+         <ttl>Application Building and Collection Processing</ttl>
+         <xreftext>Section 2.5, “Application Building and Collection Processing”</xreftext>
+         <div element="section" href="#d0e1151" number="2.5.1">
+            <ttl>Using the framework from an Application</ttl>
+            <xreftext>Section 2.5.1, “Using the framework from an Application”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.application_factory_ae" number="2.4" targetptr="ugr.conceptual_overview.application_factory_ae">
+               <ttl>Using UIMA Framework to create and interact with an Analysis Engine</ttl>
+               <xreftext>Figure 2.4, “Using UIMA Framework to create and interact with an Analysis Engine”</xreftext>
+            </obj>
+         </div>
+         <div element="section" href="#d0e1182" number="2.5.2">
+            <ttl>Graduating to Collection Processing</ttl>
+            <xreftext>Section 2.5.2, “Graduating to Collection Processing”</xreftext>
+            <obj element="figure" href="#ugr.conceptual_overview.fig.cpe" number="2.5" targetptr="ugr.conceptual_overview.fig.cpe">
+               <ttl>High-Level UIMA Component Architecture from Source to Sink</ttl>
+               <xreftext>Figure 2.5, “High-Level UIMA Component Architecture from Source to Sink”</xreftext>
+            </obj>
+            <obj element="figure" href="#ugr.conceptual_overview.fig.cpm" number="2.6" targetptr="ugr.conceptual_overview.fig.cpm">
+               <ttl>Collection Processing Manager in UIMA Framework</ttl>
+               <xreftext>Figure 2.6, “Collection Processing Manager in UIMA Framework”</xreftext>
+            </obj>
+         </div>
+      </div>
+      <div element="section" href="#d0e1285" number="2.6">
+         <ttl>Exploiting Analysis Results</ttl>
+         <xreftext>Section 2.6, “Exploiting Analysis Results”</xreftext>
+         <div element="section" href="#d0e1293" number="2.6.1">
+            <ttl>Semantic Search</ttl>
+            <xreftext>Section 2.6.1, “Semantic Search”</xreftext>
+         </div>
+         <div element="section" href="#d0e1351" number="2.6.2">
+            <ttl>Databases</ttl>
+            <xreftext>Section 2.6.2, “Databases”</xreftext>
+         </div>
+      </div>
+      <div element="section" href="#d0e1356" number="2.7">
+         <ttl>Multimodal Processing in UIMA</ttl>
+         <xreftext>Section 2.7, “Multimodal Processing in UIMA”</xreftext>
+         <obj element="figure" href="#ugr.conceptual_overview.fig.multiple_sofas" number="2.7" targetptr="ugr.conceptual_overview.fig.multiple_sofas">
+            <ttl>Multiple Sofas in support of multi-modal analysis of an audio Stream. Some
+        engines work on the audio “view”, some on the text
+        “view” and some on both.</ttl>
+            <xreftext>Figure 2.7, “Multiple Sofas in support of multi-modal analysis of an audio Stream. Some
+        engines work on the audio “view”, some on the text
+        “view” and some on both.”</xreftext>
+         </obj>
+      </div>
+      <div element="section" href="#d0e1411" number="2.8">
+         <ttl>Next Steps</ttl>
+         <xreftext>Section 2.8, “Next Steps”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.eclipse_setup" number="3" targetptr="ugr.eclipse_setup">
+      <ttl>Setting up Eclipse IDE to work with UIMA</ttl>
+      <xreftext>Chapter 3, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" font-style="italic">Setting up Eclipse IDE to work with UIMA</fo:inline>
+      </xreftext>
+      <div element="section" href="#d0e1462" number="3.1">
+         <ttl>Installation</ttl>
+         <xreftext>Section 3.1, “Installation”</xreftext>
+         <div element="section" href="#d0e1465" number="3.1.1">
+            <ttl>Install Eclipse</ttl>
+            <xreftext>Section 3.1.1, “Install Eclipse”</xreftext>
+         </div>
+         <div element="section" href="#d0e1486" number="3.1.2">
+            <ttl>Install additional Eclipse component: EMF</ttl>
+            <xreftext>Section 3.1.2, “Install additional Eclipse component: EMF”</xreftext>
+         </div>
+         <div element="section" href="#d0e1538" number="3.1.3">
+            <ttl>Install the UIMA SDK</ttl>
+            <xreftext>Section 3.1.3, “Install the UIMA SDK”</xreftext>
+         </div>
+         <div element="section" href="#d0e1545" number="3.1.4">
+            <ttl>Install the UIMA Eclipse Plugins</ttl>
+            <xreftext>Section 3.1.4, “Install the UIMA Eclipse Plugins”</xreftext>
+         </div>
+         <div element="section" href="#d0e1550" number="3.1.5">
+            <ttl>Start Eclipse</ttl>
+            <xreftext>Section 3.1.5, “Start Eclipse”</xreftext>
+            <div element="section" href="#d0e1566" number="3.1.5.1">
+               <ttl>Special startup parameter for Eclipse: -clean</ttl>
+               <xreftext>Section 3.1.5.1, “Special startup parameter for Eclipse: -clean”</xreftext>
+            </div>
+         </div>
+      </div>
+      <div element="section" href="#ugr.eclipse_setup.example_code" number="3.2" targetptr="ugr.eclipse_setup.example_code">
+         <ttl>Setting up Eclipse to view Example Code</ttl>
+         <xreftext>Section 3.2, “Setting up Eclipse to view Example Code”</xreftext>
+      </div>
+      <div element="section" href="#d0e1669" number="3.3">
+         <ttl>Running external tools from Eclipse</ttl>
+         <xreftext>Section 3.3, “Running external tools from Eclipse”</xreftext>
+      </div>
+   </div>
+   <div element="chapter" href="#ugr.faqs" number="4" targetptr="ugr.faqs">
+      <ttl>UIMA Frequently Asked Questions (FAQs)</ttl>
+      <xreftext>Chapter 4, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" font-style="italic">UIMA Frequently Asked Questions (FAQs)</fo:inline>
+      </xreftext>
+   </div>
+   <div element="chapter" href="#ugr.glossary" number="5" targetptr="ugr.glossary">
+      <ttl>Glossary of Key Terms and Concepts</ttl>
+      <xreftext>Chapter 5, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" font-style="italic">Glossary of Key Terms and Concepts</fo:inline>
+      </xreftext>
+      <obj element="glossentry" href="#ugr.glossary.aggregate" number="" targetptr="ugr.glossary.aggregate">
+         <ttl>Aggregate Analysis Engine</ttl>
+         <xreftext>Aggregate Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.analysis_engine" number="" targetptr="ugr.glossary.analysis_engine">
+         <ttl>Analysis Engine</ttl>
+         <xreftext>Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.annotation" number="" targetptr="ugr.glossary.annotation">
+         <ttl>Annotation</ttl>
+         <xreftext>Annotation</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.annotator" number="" targetptr="ugr.glossary.annotator">
+         <ttl>Annotator</ttl>
+         <xreftext>Annotator</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.application" number="" targetptr="ugr.glossary.application">
+         <ttl>Application</ttl>
+         <xreftext>Application</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas" number="" targetptr="ugr.glossary.cas">
+         <ttl>CAS</ttl>
+         <xreftext>CAS</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_consumer" number="" targetptr="ugr.glossary.cas_consumer">
+         <ttl>CAS Consumer</ttl>
+         <xreftext>CAS Consumer</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_initializer" number="" targetptr="ugr.glossary.cas_initializer">
+         <ttl>CAS Initializer (deprecated)</ttl>
+         <xreftext>CAS Initializer (deprecated)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_multiplier" number="" targetptr="ugr.glossary.cas_multiplier">
+         <ttl>CAS Multiplier</ttl>
+         <xreftext>CAS Multiplier</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_processor" number="" targetptr="ugr.glossary.cas_processor">
+         <ttl>CAS Processor</ttl>
+         <xreftext>CAS Processor</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cas_view" number="" targetptr="ugr.glossary.cas_view">
+         <ttl>CAS View</ttl>
+         <xreftext>CAS View</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cde" number="" targetptr="ugr.glossary.cde">
+         <ttl>CDE</ttl>
+         <xreftext>CDE</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cpe" number="" targetptr="ugr.glossary.cpe">
+         <ttl>Collection Processing Engine (CPE)</ttl>
+         <xreftext>Collection Processing Engine (CPE)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.cpm" number="" targetptr="ugr.glossary.cpm">
+         <ttl>Collection Processing Manager (CPM)</ttl>
+         <xreftext>Collection Processing Manager (CPM)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.collection_reader" number="" targetptr="ugr.glossary.collection_reader">
+         <ttl>Collection Reader</ttl>
+         <xreftext>Collection Reader</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.fact_search" number="" targetptr="ugr.glossary.fact_search">
+         <ttl>Fact Search</ttl>
+         <xreftext>Fact Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.feature" number="" targetptr="ugr.glossary.feature">
+         <ttl>Feature</ttl>
+         <xreftext>Feature</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.flow_controller" number="" targetptr="ugr.glossary.flow_controller">
+         <ttl>Flow Controller</ttl>
+         <xreftext>Flow Controller</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.hybrid_analysis_engine" number="" targetptr="ugr.glossary.hybrid_analysis_engine">
+         <ttl>Hybrid Analysis Engine</ttl>
+         <xreftext>Hybrid Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.index" number="" targetptr="ugr.glossary.index">
+         <ttl>Index</ttl>
+         <xreftext>Index</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.jcas" number="" targetptr="ugr.glossary.jcas">
+         <ttl>JCas</ttl>
+         <xreftext>JCas</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.keyword_search" number="" targetptr="ugr.glossary.keyword_search">
+         <ttl>Keyword Search</ttl>
+         <xreftext>Keyword Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.knowledge_base" number="" targetptr="ugr.glossary.knowledge_base">
+         <ttl>Knowledge Base</ttl>
+         <xreftext>Knowledge Base</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.loosely_coupled_analysis_engine" number="" targetptr="ugr.glossary.loosely_coupled_analysis_engine">
+         <ttl>Loosely-Coupled Analysis Engine</ttl>
+         <xreftext>Loosely-Coupled Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.ontology" number="" targetptr="ugr.glossary.ontology">
+         <ttl/>
+         <xreftext/>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.pear" number="" targetptr="ugr.glossary.pear">
+         <ttl>PEAR</ttl>
+         <xreftext>PEAR</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.primitive_analysis_engine" number="" targetptr="ugr.glossary.primitive_analysis_engine">
+         <ttl>Primitive Analysis Engine</ttl>
+         <xreftext>Primitive Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.semantic_search" number="" targetptr="ugr.glossary.semantic_search">
+         <ttl>Semantic Search</ttl>
+         <xreftext>Semantic Search</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.structured_information" number="" targetptr="ugr.glossary.structured_information">
+         <ttl>Structured Information</ttl>
+         <xreftext>Structured Information</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.sofa" number="" targetptr="ugr.glossary.sofa">
+         <ttl>Subject of Analysis (Sofa)</ttl>
+         <xreftext>Subject of Analysis (Sofa)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.tightly_coupled_analysis_engine" number="" targetptr="ugr.glossary.tightly_coupled_analysis_engine">
+         <ttl>Tightly-Coupled Analysis Engine</ttl>
+         <xreftext>Tightly-Coupled Analysis Engine</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.type" number="" targetptr="ugr.glossary.type">
+         <ttl>Type</ttl>
+         <xreftext>Type</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.type_system" number="" targetptr="ugr.glossary.type_system">
+         <ttl>Type System</ttl>
+         <xreftext>Type System</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.unstructured_information" number="" targetptr="ugr.glossary.unstructured_information">
+         <ttl>Unstructured Information</ttl>
+         <xreftext>Unstructured Information</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima" number="" targetptr="ugr.glossary.uima">
+         <ttl>UIMA</ttl>
+         <xreftext>UIMA</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima_java_framework" number="" targetptr="ugr.glossary.uima_java_framework">
+         <ttl>UIMA Java Framework</ttl>
+         <xreftext>UIMA Java Framework</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.uima_sdk" number="" targetptr="ugr.glossary.uima_sdk">
+         <ttl>UIMA Software Development Kit (SDK)</ttl>
+         <xreftext>UIMA Software Development Kit (SDK)</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.xcas" number="" targetptr="ugr.glossary.xcas">
+         <ttl>XCAS</ttl>
+         <xreftext>XCAS</xreftext>
+      </obj>
+      <obj element="glossentry" href="#ugr.glossary.xmi" number="" targetptr="ugr.glossary.xmi">
+         <ttl>XML Metadata Interchange (XMI)</ttl>
+         <xreftext>XML Metadata Interchange (XMI)</xreftext>
+      </obj>
+   </div>
+</div>
\ No newline at end of file