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Posted to user@spark.apache.org by Zoran Jeremic <zo...@gmail.com> on 2015/07/10 19:09:43 UTC
Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Hi,
I've developed maven application that uses mongo-hadoop connector to pull
data from mongodb and process it using Apache spark. The whole process runs
smoothly if I run it on embedded Jetty server. However, if I deploy it to
Tomcat server 7, it's always interrupted at the line of code which collects
data from JavaPairRDD with exception that doesn't give me any clue what the
problem might be:
15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added
broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free:
946.6 MB)
15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from
newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in
thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing
class
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:264)
at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
at java.lang.Thread.run(Thread.java:745)
I guess there is some library conflict happening on the Tomcat, but I have
no idea where to look for problem.
This is my whole dependency tree:
[INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @
warranty-analytics ---[INFO]
org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +-
javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +-
com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +-
com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +-
com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \-
javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +-
com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +-
org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +-
org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \-
jdk.tools:jdk.tools:jar:1.6:system[INFO] | +-
com.google.guava:guava:jar:11.0.2:compile[INFO] | +-
commons-cli:commons-cli:jar:1.2:compile[INFO] | +-
xmlenc:xmlenc:jar:0.52:compile[INFO] | +-
commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +-
commons-codec:commons-codec:jar:1.4:compile[INFO] | +-
commons-io:commons-io:jar:2.4:compile[INFO] | +-
commons-net:commons-net:jar:3.1:compile[INFO] | +-
commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +-
javax.servlet:servlet-api:jar:2.5:compile[INFO] | +-
org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +-
org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +-
com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +-
tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +-
tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +-
javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +-
net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +-
org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \-
com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +-
commons-lang:commons-lang:jar:2.6:compile[INFO] | +-
commons-configuration:commons-configuration:jar:1.6:compile[INFO] | |
+- commons-digester:commons-digester:jar:1.8:compile[INFO] | | |
\- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | |
\- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] |
+- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +-
org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +-
org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \-
com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +-
com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +-
org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +-
com.jcraft:jsch:jar:0.1.42:compile[INFO] | +-
com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +-
org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \-
org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \-
org.tukaani:xz:jar:1.0:compile[INFO] +-
org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] |
+- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO]
| | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO]
| | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO]
| | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | |
+- javax.inject:javax.inject:jar:1:compile[INFO] | | | \-
aopalliance:aopalliance:jar:1.0:compile[INFO] | | \-
io.netty:netty:jar:3.6.2.Final:compile[INFO] | +-
org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO]
| | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO]
| | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO]
| +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO]
| +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO]
| | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO]
| | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO]
| | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO]
| \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO]
+- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +-
org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO]
| +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \-
org.glassfish:javax.json:jar:1.0.3:compile[INFO] +-
org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +-
org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO]
| +- javax.activation:activation:jar:1.1:compile[INFO] | +-
org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \-
net.jcip:jcip-annotations:jar:1.0:compile[INFO] +-
org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO]
| \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +-
org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO]
| \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +-
com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +-
javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \-
com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \-
com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] |
\- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +-
org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \-
stax:stax-api:jar:1.0.1:compile[INFO] +-
org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +-
org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +-
org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +-
com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +-
xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \-
xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +-
org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +-
org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] |
+- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \-
org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +-
org.apache.commons:commons-math:jar:2.1:compile[INFO] | \-
commons-el:commons-el:jar:1.0:compile[INFO] +-
org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +-
org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +-
org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \-
org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +-
org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +-
org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +-
org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +-
org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] |
+- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +-
org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \-
com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO]
+- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +-
org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +-
com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +-
com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +-
net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \-
xerces:xercesImpl:jar:2.9.1:compile[INFO] +-
org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +-
com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO]
+- org.easymock:easymock:jar:3.2:compile[INFO] | +-
cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \-
org.objenesis:objenesis:jar:1.3:compile[INFO] +-
mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +-
org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +-
org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +-
org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO]
| +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO]
| +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \-
xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +-
org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO]
| +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO]
| +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +-
antlr:antlr:jar:2.7.7:compile[INFO] | \-
org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +-
org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +-
org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \-
javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +-
org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \-
net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +-
junit:junit:jar:4.11:compile[INFO] | \-
org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +-
org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +-
org.mongodb:bson:jar:3.0.2:compile[INFO] +-
com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +-
org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +-
org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +-
org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +-
commons-logging:commons-logging:jar:1.2:compile[INFO] +-
org.apache.commons:commons-math3:jar:3.5:compile[INFO] +-
log4j:log4j:jar:1.2.17:compile[INFO] +-
com.typesafe:config:jar:1.2.1:compile[INFO] +-
org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \-
c3p0:c3p0:jar:0.9.1.1:compile[INFO] +-
com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \-
joda-time:joda-time:jar:2.3:compile[INFO] +-
com.google.code.gson:gson:jar:2.2.2:compile[INFO] \-
org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +-
com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \-
com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +-
com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO]
| \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO]
+- com.twitter:chill-java:jar:0.5.0:compile[INFO] +-
org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +-
org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \-
org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +-
org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +-
org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO]
+- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO]
+- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +-
org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \-
org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] |
\- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +-
org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO]
+- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +-
com.ning:compress-lzf:jar:1.0.3:compile[INFO] +-
org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +-
net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +-
org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +-
org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO]
| +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO]
| +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO]
| \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO]
+- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO]
+- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +-
org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \-
org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +-
org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \-
org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \-
org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +-
org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +-
io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +-
com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +-
io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +-
io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +-
io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +-
io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +-
com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO]
| +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO]
| \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO]
+- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO]
| \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +-
org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +-
oro:oro:jar:2.0.8:compile[INFO] +-
org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \-
org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +-
net.razorvine:pyrolite:jar:4.4:compile[INFO] +-
net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \-
org.spark-project.spark:unused:jar:1.0.0:compile
I hope some of you guys will have idea where the problem might be or how to
investigate since these logs doesn't tell me too much.
Thanks,
Zoran
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Zoran Jeremic <zo...@gmail.com>.
Yes. You're right. I didn't get it till now.
Thanks.
On Sun, Jul 26, 2015 at 7:36 AM, Ted Yu <yu...@gmail.com> wrote:
> bq. [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>
> I think the above notation means spark-core_2.10 is the last dependency.
>
> Cheers
>
> On Thu, Jul 23, 2015 at 9:22 PM, Zoran Jeremic <zo...@gmail.com>
> wrote:
>
>> Hi Yana,
>>
>> Sorry for late response. I just saw your email. At the end I ended with
>> the following pom https://www.dropbox.com/s/19fldb9qnnfieck/pom.xml?dl=0
>> There were multiple problems I had to struggle with. One of these were
>> that my application had REST implemented with jboss jersey which got
>> conflicts with sun jersey embedded in spark libraries, so after several
>> days of trying to fix that, I change my REST implementation and switched to
>> sun jersey.
>>
>> Although I'm not sure why spark-core shows under gson:
>>
>> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
>> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>>
>> It's not actually under gson. Both, gson and spark-core are root libraries. Spark-core has children libraries, so that's why it has "\-" in front of it.
>>
>> Zoran
>>
>> On Mon, Jul 13, 2015 at 1:17 PM, Yana Kadiyska <ya...@gmail.com>
>> wrote:
>>
>>> Oh, this is very interesting -- can you explain about your dependencies
>>> -- I'm running Tomcat 7 and ended up using spark-assembly from WEB_INF/lib
>>> and removing the javax/servlet package out of it...but it's a pain in the
>>> neck.
>>> If I'm reading your first message correctly you use hadoop common and
>>> spark-core? Although I'm not sure why spark-core shows under gson:
>>>
>>> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
>>> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>>>
>>>
>>> Do you fat jar spark-core? Do you have spark-assembly in Tomcat's runtime classpath anywhere? Curious on what a minimal setup here is.
>>>
>>>
>>> Thanks a lot (I'd love to see your .pom if you have it on github or somewhere accessible).
>>>
>>>
>>> On Fri, Jul 10, 2015 at 2:24 PM, Zoran Jeremic <zo...@gmail.com>
>>> wrote:
>>>
>>>> It looks like there is no problem with Tomcat 8.
>>>>
>>>> On Fri, Jul 10, 2015 at 11:12 AM, Zoran Jeremic <
>>>> zoran.jeremic@gmail.com> wrote:
>>>>
>>>>> Hi Ted,
>>>>>
>>>>> I'm running Tomcat 7 with Java:
>>>>>
>>>>> java version "1.8.0_45"
>>>>> Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
>>>>> Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
>>>>>
>>>>> Zoran
>>>>>
>>>>>
>>>>> On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
>>>>>
>>>>>> What version of Java is Tomcat run ?
>>>>>>
>>>>>> Thanks
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> I've developed maven application that uses mongo-hadoop connector to
>>>>>> pull data from mongodb and process it using Apache spark. The whole process
>>>>>> runs smoothly if I run it on embedded Jetty server. However, if I deploy it
>>>>>> to Tomcat server 7, it's always interrupted at the line of code which
>>>>>> collects data from JavaPairRDD with exception that doesn't give me any clue
>>>>>> what the problem might be:
>>>>>>
>>>>>> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
>>>>>> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
>>>>>> at java.lang.ClassLoader.defineClass1(Native Method)
>>>>>> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
>>>>>> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
>>>>>> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
>>>>>> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
>>>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
>>>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
>>>>>> at java.lang.Class.forName0(Native Method)
>>>>>> at java.lang.Class.forName(Class.java:264)
>>>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
>>>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
>>>>>> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
>>>>>> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
>>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>>>> at scala.Option.getOrElse(Option.scala:120)
>>>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>>>> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
>>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>>>> at scala.Option.getOrElse(Option.scala:120)
>>>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>>>> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
>>>>>> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
>>>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
>>>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
>>>>>> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
>>>>>> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
>>>>>> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
>>>>>> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
>>>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
>>>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
>>>>>> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
>>>>>> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
>>>>>> at java.lang.Thread.run(Thread.java:745)
>>>>>>
>>>>>>
>>>>>> I guess there is some library conflict happening on the Tomcat, but I
>>>>>> have no idea where to look for problem.
>>>>>>
>>>>>> This is my whole dependency tree:
>>>>>>
>>>>>> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>>>>>>
>>>>>>
>>>>>> I hope some of you guys will have idea where the problem might be or
>>>>>> how to investigate since these logs doesn't tell me too much.
>>>>>>
>>>>>>
>>>>>> Thanks,
>>>>>> Zoran
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>> --
>>>>>
>>>>> *******************************************************************************
>>>>> Zoran Jeremic, PhD
>>>>> Senior System Analyst & Programmer
>>>>>
>>>>> Athabasca University
>>>>> Tel: +1 604 92 89 944
>>>>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>>>>> Homepage: http://zoranjeremic.org
>>>>>
>>>>> **********************************************************************************
>>>>>
>>>>
>>>>
>>>>
>>>> --
>>>>
>>>> *******************************************************************************
>>>> Zoran Jeremic, PhD
>>>> Senior System Analyst & Programmer
>>>>
>>>> Athabasca University
>>>> Tel: +1 604 92 89 944
>>>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>>>> Homepage: http://zoranjeremic.org
>>>>
>>>> **********************************************************************************
>>>>
>>>
>>>
>>
>>
>> --
>>
>> *******************************************************************************
>> Zoran Jeremic, PhD
>> Senior System Analyst & Programmer
>>
>> Athabasca University
>> Tel: +1 604 92 89 944
>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>> Homepage: http://zoranjeremic.org
>>
>> **********************************************************************************
>>
>
>
--
*******************************************************************************
Zoran Jeremic, PhD
Senior System Analyst & Programmer
Athabasca University
Tel: +1 604 92 89 944
E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
Homepage: http://zoranjeremic.org
**********************************************************************************
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Ted Yu <yu...@gmail.com>.
bq. [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
I think the above notation means spark-core_2.10 is the last dependency.
Cheers
On Thu, Jul 23, 2015 at 9:22 PM, Zoran Jeremic <zo...@gmail.com>
wrote:
> Hi Yana,
>
> Sorry for late response. I just saw your email. At the end I ended with
> the following pom https://www.dropbox.com/s/19fldb9qnnfieck/pom.xml?dl=0
> There were multiple problems I had to struggle with. One of these were
> that my application had REST implemented with jboss jersey which got
> conflicts with sun jersey embedded in spark libraries, so after several
> days of trying to fix that, I change my REST implementation and switched to
> sun jersey.
>
> Although I'm not sure why spark-core shows under gson:
>
> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>
> It's not actually under gson. Both, gson and spark-core are root libraries. Spark-core has children libraries, so that's why it has "\-" in front of it.
>
> Zoran
>
> On Mon, Jul 13, 2015 at 1:17 PM, Yana Kadiyska <ya...@gmail.com>
> wrote:
>
>> Oh, this is very interesting -- can you explain about your dependencies
>> -- I'm running Tomcat 7 and ended up using spark-assembly from WEB_INF/lib
>> and removing the javax/servlet package out of it...but it's a pain in the
>> neck.
>> If I'm reading your first message correctly you use hadoop common and
>> spark-core? Although I'm not sure why spark-core shows under gson:
>>
>> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
>> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>>
>>
>> Do you fat jar spark-core? Do you have spark-assembly in Tomcat's runtime classpath anywhere? Curious on what a minimal setup here is.
>>
>>
>> Thanks a lot (I'd love to see your .pom if you have it on github or somewhere accessible).
>>
>>
>> On Fri, Jul 10, 2015 at 2:24 PM, Zoran Jeremic <zo...@gmail.com>
>> wrote:
>>
>>> It looks like there is no problem with Tomcat 8.
>>>
>>> On Fri, Jul 10, 2015 at 11:12 AM, Zoran Jeremic <zoran.jeremic@gmail.com
>>> > wrote:
>>>
>>>> Hi Ted,
>>>>
>>>> I'm running Tomcat 7 with Java:
>>>>
>>>> java version "1.8.0_45"
>>>> Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
>>>> Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
>>>>
>>>> Zoran
>>>>
>>>>
>>>> On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
>>>>
>>>>> What version of Java is Tomcat run ?
>>>>>
>>>>> Thanks
>>>>>
>>>>>
>>>>>
>>>>> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
>>>>> wrote:
>>>>>
>>>>> Hi,
>>>>>
>>>>> I've developed maven application that uses mongo-hadoop connector to
>>>>> pull data from mongodb and process it using Apache spark. The whole process
>>>>> runs smoothly if I run it on embedded Jetty server. However, if I deploy it
>>>>> to Tomcat server 7, it's always interrupted at the line of code which
>>>>> collects data from JavaPairRDD with exception that doesn't give me any clue
>>>>> what the problem might be:
>>>>>
>>>>> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
>>>>> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
>>>>> at java.lang.ClassLoader.defineClass1(Native Method)
>>>>> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
>>>>> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
>>>>> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
>>>>> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
>>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
>>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
>>>>> at java.lang.Class.forName0(Native Method)
>>>>> at java.lang.Class.forName(Class.java:264)
>>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
>>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
>>>>> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
>>>>> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>>> at scala.Option.getOrElse(Option.scala:120)
>>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>>> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>>> at scala.Option.getOrElse(Option.scala:120)
>>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>>> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
>>>>> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
>>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
>>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
>>>>> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
>>>>> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
>>>>> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
>>>>> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
>>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
>>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
>>>>> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
>>>>> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
>>>>> at java.lang.Thread.run(Thread.java:745)
>>>>>
>>>>>
>>>>> I guess there is some library conflict happening on the Tomcat, but I
>>>>> have no idea where to look for problem.
>>>>>
>>>>> This is my whole dependency tree:
>>>>>
>>>>> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>>>>>
>>>>>
>>>>> I hope some of you guys will have idea where the problem might be or
>>>>> how to investigate since these logs doesn't tell me too much.
>>>>>
>>>>>
>>>>> Thanks,
>>>>> Zoran
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>>
>>>> *******************************************************************************
>>>> Zoran Jeremic, PhD
>>>> Senior System Analyst & Programmer
>>>>
>>>> Athabasca University
>>>> Tel: +1 604 92 89 944
>>>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>>>> Homepage: http://zoranjeremic.org
>>>>
>>>> **********************************************************************************
>>>>
>>>
>>>
>>>
>>> --
>>>
>>> *******************************************************************************
>>> Zoran Jeremic, PhD
>>> Senior System Analyst & Programmer
>>>
>>> Athabasca University
>>> Tel: +1 604 92 89 944
>>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>>> Homepage: http://zoranjeremic.org
>>>
>>> **********************************************************************************
>>>
>>
>>
>
>
> --
>
> *******************************************************************************
> Zoran Jeremic, PhD
> Senior System Analyst & Programmer
>
> Athabasca University
> Tel: +1 604 92 89 944
> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
> Homepage: http://zoranjeremic.org
>
> **********************************************************************************
>
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Zoran Jeremic <zo...@gmail.com>.
Hi Yana,
Sorry for late response. I just saw your email. At the end I ended with the
following pom https://www.dropbox.com/s/19fldb9qnnfieck/pom.xml?dl=0
There were multiple problems I had to struggle with. One of these were that
my application had REST implemented with jboss jersey which got conflicts
with sun jersey embedded in spark libraries, so after several days of
trying to fix that, I change my REST implementation and switched to sun
jersey.
Although I'm not sure why spark-core shows under gson:
[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
It's not actually under gson. Both, gson and spark-core are root
libraries. Spark-core has children libraries, so that's why it has
"\-" in front of it.
Zoran
On Mon, Jul 13, 2015 at 1:17 PM, Yana Kadiyska <ya...@gmail.com>
wrote:
> Oh, this is very interesting -- can you explain about your dependencies --
> I'm running Tomcat 7 and ended up using spark-assembly from WEB_INF/lib and
> removing the javax/servlet package out of it...but it's a pain in the neck.
> If I'm reading your first message correctly you use hadoop common and
> spark-core? Although I'm not sure why spark-core shows under gson:
>
> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
>
>
> Do you fat jar spark-core? Do you have spark-assembly in Tomcat's runtime classpath anywhere? Curious on what a minimal setup here is.
>
>
> Thanks a lot (I'd love to see your .pom if you have it on github or somewhere accessible).
>
>
> On Fri, Jul 10, 2015 at 2:24 PM, Zoran Jeremic <zo...@gmail.com>
> wrote:
>
>> It looks like there is no problem with Tomcat 8.
>>
>> On Fri, Jul 10, 2015 at 11:12 AM, Zoran Jeremic <zo...@gmail.com>
>> wrote:
>>
>>> Hi Ted,
>>>
>>> I'm running Tomcat 7 with Java:
>>>
>>> java version "1.8.0_45"
>>> Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
>>> Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
>>>
>>> Zoran
>>>
>>>
>>> On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
>>>
>>>> What version of Java is Tomcat run ?
>>>>
>>>> Thanks
>>>>
>>>>
>>>>
>>>> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
>>>> wrote:
>>>>
>>>> Hi,
>>>>
>>>> I've developed maven application that uses mongo-hadoop connector to
>>>> pull data from mongodb and process it using Apache spark. The whole process
>>>> runs smoothly if I run it on embedded Jetty server. However, if I deploy it
>>>> to Tomcat server 7, it's always interrupted at the line of code which
>>>> collects data from JavaPairRDD with exception that doesn't give me any clue
>>>> what the problem might be:
>>>>
>>>> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
>>>> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
>>>> at java.lang.ClassLoader.defineClass1(Native Method)
>>>> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
>>>> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
>>>> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
>>>> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
>>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
>>>> at java.lang.Class.forName0(Native Method)
>>>> at java.lang.Class.forName(Class.java:264)
>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
>>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
>>>> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
>>>> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>> at scala.Option.getOrElse(Option.scala:120)
>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>>> at scala.Option.getOrElse(Option.scala:120)
>>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>>> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
>>>> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
>>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
>>>> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
>>>> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
>>>> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
>>>> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
>>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
>>>> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
>>>> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
>>>> at java.lang.Thread.run(Thread.java:745)
>>>>
>>>>
>>>> I guess there is some library conflict happening on the Tomcat, but I
>>>> have no idea where to look for problem.
>>>>
>>>> This is my whole dependency tree:
>>>>
>>>> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>>>>
>>>>
>>>> I hope some of you guys will have idea where the problem might be or
>>>> how to investigate since these logs doesn't tell me too much.
>>>>
>>>>
>>>> Thanks,
>>>> Zoran
>>>>
>>>>
>>>
>>>
>>> --
>>>
>>> *******************************************************************************
>>> Zoran Jeremic, PhD
>>> Senior System Analyst & Programmer
>>>
>>> Athabasca University
>>> Tel: +1 604 92 89 944
>>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>>> Homepage: http://zoranjeremic.org
>>>
>>> **********************************************************************************
>>>
>>
>>
>>
>> --
>>
>> *******************************************************************************
>> Zoran Jeremic, PhD
>> Senior System Analyst & Programmer
>>
>> Athabasca University
>> Tel: +1 604 92 89 944
>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>> Homepage: http://zoranjeremic.org
>>
>> **********************************************************************************
>>
>
>
--
*******************************************************************************
Zoran Jeremic, PhD
Senior System Analyst & Programmer
Athabasca University
Tel: +1 604 92 89 944
E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
Homepage: http://zoranjeremic.org
**********************************************************************************
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Yana Kadiyska <ya...@gmail.com>.
Oh, this is very interesting -- can you explain about your dependencies --
I'm running Tomcat 7 and ended up using spark-assembly from WEB_INF/lib and
removing the javax/servlet package out of it...but it's a pain in the neck.
If I'm reading your first message correctly you use hadoop common and
spark-core? Although I'm not sure why spark-core shows under gson:
[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
Do you fat jar spark-core? Do you have spark-assembly in Tomcat's
runtime classpath anywhere? Curious on what a minimal setup here is.
Thanks a lot (I'd love to see your .pom if you have it on github or
somewhere accessible).
On Fri, Jul 10, 2015 at 2:24 PM, Zoran Jeremic <zo...@gmail.com>
wrote:
> It looks like there is no problem with Tomcat 8.
>
> On Fri, Jul 10, 2015 at 11:12 AM, Zoran Jeremic <zo...@gmail.com>
> wrote:
>
>> Hi Ted,
>>
>> I'm running Tomcat 7 with Java:
>>
>> java version "1.8.0_45"
>> Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
>> Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
>>
>> Zoran
>>
>>
>> On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
>>
>>> What version of Java is Tomcat run ?
>>>
>>> Thanks
>>>
>>>
>>>
>>> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
>>> wrote:
>>>
>>> Hi,
>>>
>>> I've developed maven application that uses mongo-hadoop connector to
>>> pull data from mongodb and process it using Apache spark. The whole process
>>> runs smoothly if I run it on embedded Jetty server. However, if I deploy it
>>> to Tomcat server 7, it's always interrupted at the line of code which
>>> collects data from JavaPairRDD with exception that doesn't give me any clue
>>> what the problem might be:
>>>
>>> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
>>> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
>>> at java.lang.ClassLoader.defineClass1(Native Method)
>>> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
>>> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
>>> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
>>> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
>>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
>>> at java.lang.Class.forName0(Native Method)
>>> at java.lang.Class.forName(Class.java:264)
>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
>>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
>>> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
>>> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>> at scala.Option.getOrElse(Option.scala:120)
>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>>> at scala.Option.getOrElse(Option.scala:120)
>>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>>> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
>>> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
>>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
>>> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
>>> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
>>> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
>>> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
>>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
>>> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
>>> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
>>> at java.lang.Thread.run(Thread.java:745)
>>>
>>>
>>> I guess there is some library conflict happening on the Tomcat, but I
>>> have no idea where to look for problem.
>>>
>>> This is my whole dependency tree:
>>>
>>> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>>>
>>>
>>> I hope some of you guys will have idea where the problem might be or how
>>> to investigate since these logs doesn't tell me too much.
>>>
>>>
>>> Thanks,
>>> Zoran
>>>
>>>
>>
>>
>> --
>>
>> *******************************************************************************
>> Zoran Jeremic, PhD
>> Senior System Analyst & Programmer
>>
>> Athabasca University
>> Tel: +1 604 92 89 944
>> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
>> Homepage: http://zoranjeremic.org
>>
>> **********************************************************************************
>>
>
>
>
> --
>
> *******************************************************************************
> Zoran Jeremic, PhD
> Senior System Analyst & Programmer
>
> Athabasca University
> Tel: +1 604 92 89 944
> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
> Homepage: http://zoranjeremic.org
>
> **********************************************************************************
>
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Zoran Jeremic <zo...@gmail.com>.
It looks like there is no problem with Tomcat 8.
On Fri, Jul 10, 2015 at 11:12 AM, Zoran Jeremic <zo...@gmail.com>
wrote:
> Hi Ted,
>
> I'm running Tomcat 7 with Java:
>
> java version "1.8.0_45"
> Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
> Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
>
> Zoran
>
>
> On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
>
>> What version of Java is Tomcat run ?
>>
>> Thanks
>>
>>
>>
>> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
>> wrote:
>>
>> Hi,
>>
>> I've developed maven application that uses mongo-hadoop connector to pull
>> data from mongodb and process it using Apache spark. The whole process runs
>> smoothly if I run it on embedded Jetty server. However, if I deploy it to
>> Tomcat server 7, it's always interrupted at the line of code which collects
>> data from JavaPairRDD with exception that doesn't give me any clue what the
>> problem might be:
>>
>> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
>> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
>> at java.lang.ClassLoader.defineClass1(Native Method)
>> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
>> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
>> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
>> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
>> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
>> at java.lang.Class.forName0(Native Method)
>> at java.lang.Class.forName(Class.java:264)
>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
>> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
>> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
>> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>> at scala.Option.getOrElse(Option.scala:120)
>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
>> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
>> at scala.Option.getOrElse(Option.scala:120)
>> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
>> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
>> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
>> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
>> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
>> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
>> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
>> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
>> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
>> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
>> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
>> at java.lang.Thread.run(Thread.java:745)
>>
>>
>> I guess there is some library conflict happening on the Tomcat, but I
>> have no idea where to look for problem.
>>
>> This is my whole dependency tree:
>>
>> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>>
>>
>> I hope some of you guys will have idea where the problem might be or how
>> to investigate since these logs doesn't tell me too much.
>>
>>
>> Thanks,
>> Zoran
>>
>>
>
>
> --
>
> *******************************************************************************
> Zoran Jeremic, PhD
> Senior System Analyst & Programmer
>
> Athabasca University
> Tel: +1 604 92 89 944
> E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
> Homepage: http://zoranjeremic.org
>
> **********************************************************************************
>
--
*******************************************************************************
Zoran Jeremic, PhD
Senior System Analyst & Programmer
Athabasca University
Tel: +1 604 92 89 944
E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
Homepage: http://zoranjeremic.org
**********************************************************************************
Re: Spark on Tomcat has exception IncompatibleClassChangeError:
Implementing class
Posted by Zoran Jeremic <zo...@gmail.com>.
Hi Ted,
I'm running Tomcat 7 with Java:
java version "1.8.0_45"
Java(TM) SE Runtime Environment (build 1.8.0_45-b14)
Java HotSpot(TM) 64-Bit Server VM (build 25.45-b02, mixed mode)
Zoran
On Fri, Jul 10, 2015 at 10:45 AM, Ted Yu <yu...@gmail.com> wrote:
> What version of Java is Tomcat run ?
>
> Thanks
>
>
>
> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com>
> wrote:
>
> Hi,
>
> I've developed maven application that uses mongo-hadoop connector to pull
> data from mongodb and process it using Apache spark. The whole process runs
> smoothly if I run it on embedded Jetty server. However, if I deploy it to
> Tomcat server 7, it's always interrupted at the line of code which collects
> data from JavaPairRDD with exception that doesn't give me any clue what the
> problem might be:
>
> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
> at java.lang.ClassLoader.defineClass1(Native Method)
> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
> at java.lang.Class.forName0(Native Method)
> at java.lang.Class.forName(Class.java:264)
> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
> at scala.Option.getOrElse(Option.scala:120)
> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
> at scala.Option.getOrElse(Option.scala:120)
> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
> at java.lang.Thread.run(Thread.java:745)
>
>
> I guess there is some library conflict happening on the Tomcat, but I have
> no idea where to look for problem.
>
> This is my whole dependency tree:
>
> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---[INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT[INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided[INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile[INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile[INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile[INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile[INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile[INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system[INFO] | +- com.google.guava:guava:jar:11.0.2:compile[INFO] | +- commons-cli:commons-cli:jar:1.2:compile[INFO] | +- xmlenc:xmlenc:jar:0.52:compile[INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile[INFO] | +- commons-codec:commons-codec:jar:1.4:compile[INFO] | +- commons-io:commons-io:jar:2.4:compile[INFO] | +- commons-net:commons-net:jar:3.1:compile[INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile[INFO] | +- javax.servlet:servlet-api:jar:2.5:compile[INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile[INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile[INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile[INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime[INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime[INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime[INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile[INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile[INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile[INFO] | +- commons-lang:commons-lang:jar:2.6:compile[INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile[INFO] | | +- commons-digester:commons-digester:jar:1.8:compile[INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile[INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile[INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile[INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile[INFO] | +- org.apache.avro:avro:jar:1.7.4:compile[INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile[INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile[INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile[INFO] | +- com.jcraft:jsch:jar:0.1.42:compile[INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile[INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile[INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile[INFO] | \- org.tukaani:xz:jar:1.0:compile[INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile[INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile[INFO] | | | \- com.google.inject:guice:jar:3.0:compile[INFO] | | | +- javax.inject:javax.inject:jar:1:compile[INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile[INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile[INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile[INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile[INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile[INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile[INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile[INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile[INFO] | +- javax.json:javax.json-api:jar:1.0:compile[INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile[INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile[INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile[INFO] | +- javax.activation:activation:jar:1.1:compile[INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile[INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile[INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile[INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile[INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile[INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile[INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile[INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile[INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile[INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile[INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile[INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile[INFO] | \- stax:stax-api:jar:1.0.1:compile[INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile[INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile[INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile[INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile[INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile[INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile[INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile[INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile[INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile[INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile[INFO] | +- org.apache.commons:commons-math:jar:2.1:compile[INFO] | \- commons-el:commons-el:jar:1.0:compile[INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile[INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile[INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile[INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile[INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile[INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile[INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile[INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile[INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile[INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile[INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile[INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile[INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile[INFO] | \- xerces:xercesImpl:jar:2.9.1:compile[INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile[INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile[INFO] +- org.easymock:easymock:jar:3.2:compile[INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile[INFO] | \- org.objenesis:objenesis:jar:1.3:compile[INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile[INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile[INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile[INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile[INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile[INFO] | +- dom4j:dom4j:jar:1.6.1:compile[INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile[INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile[INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile[INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile[INFO] | +- antlr:antlr:jar:2.7.7:compile[INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile[INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile[INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile[INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile[INFO] +- junit:junit:jar:4.11:compile[INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile[INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile[INFO] +- org.mongodb:bson:jar:3.0.2:compile[INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile[INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile[INFO] +- commons-logging:commons-logging:jar:1.2:compile[INFO] +- org.apache.commons:commons-math3:jar:3.5:compile[INFO] +- log4j:log4j:jar:1.2.17:compile[INFO] +- com.typesafe:config:jar:1.2.1:compile[INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile[INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile[INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile[INFO] | \- joda-time:joda-time:jar:2.3:compile[INFO] +- com.google.code.gson:gson:jar:2.2.2:compile[INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile[INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile[INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile[INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile[INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile[INFO] +- com.twitter:chill-java:jar:0.5.0:compile[INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile[INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile[INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile[INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile[INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile[INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile[INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile[INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile[INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile[INFO] +- com.ning:compress-lzf:jar:1.0.3:compile[INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile[INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile[INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile[INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile[INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile[INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile[INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile[INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile[INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile[INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile[INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile[INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile[INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile[INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile[INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile[INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile[INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile[INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile[INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile[INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile[INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile[INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile[INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile[INFO] +- oro:oro:jar:2.0.8:compile[INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile[INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile[INFO] +- net.razorvine:pyrolite:jar:4.4:compile[INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile[INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>
>
> I hope some of you guys will have idea where the problem might be or how
> to investigate since these logs doesn't tell me too much.
>
>
> Thanks,
> Zoran
>
>
--
*******************************************************************************
Zoran Jeremic, PhD
Senior System Analyst & Programmer
Athabasca University
Tel: +1 604 92 89 944
E-mail: zoran.jeremic@gmail.com <zo...@va.mod.gov.rs>
Homepage: http://zoranjeremic.org
**********************************************************************************
Re: Spark on Tomcat has exception IncompatibleClassChangeError: Implementing class
Posted by Ted Yu <yu...@gmail.com>.
What version of Java is Tomcat run ?
Thanks
> On Jul 10, 2015, at 10:09 AM, Zoran Jeremic <zo...@gmail.com> wrote:
>
> Hi,
>
> I've developed maven application that uses mongo-hadoop connector to pull data from mongodb and process it using Apache spark. The whole process runs smoothly if I run it on embedded Jetty server. However, if I deploy it to Tomcat server 7, it's always interrupted at the line of code which collects data from JavaPairRDD with exception that doesn't give me any clue what the problem might be:
>
> 15/07/09 20:42:05 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:58302 (size: 6.3 KB, free: 946.6 MB)
> 15/07/09 20:42:05 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopRDD at SparkCategoryRecommender.java:106
> Exception in thread "Thread-6" java.lang.IncompatibleClassChangeError: Implementing class
> at java.lang.ClassLoader.defineClass1(Native Method)
> at java.lang.ClassLoader.defineClass(ClassLoader.java:760)
> at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
> at org.apache.catalina.loader.WebappClassLoader.findClassInternal(WebappClassLoader.java:2918)
> at org.apache.catalina.loader.WebappClassLoader.findClass(WebappClassLoader.java:1174)
> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1669)
> at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1547)
> at java.lang.Class.forName0(Native Method)
> at java.lang.Class.forName(Class.java:264)
> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.firstAvailableClass(SparkHadoopMapReduceUtil.scala:74)
> at org.apache.spark.mapreduce.SparkHadoopMapReduceUtil$class.newJobContext(SparkHadoopMapReduceUtil.scala:28)
> at org.apache.spark.rdd.NewHadoopRDD.newJobContext(NewHadoopRDD.scala:66)
> at org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:94)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
> at scala.Option.getOrElse(Option.scala:120)
> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
> at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219)
> at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217)
> at scala.Option.getOrElse(Option.scala:120)
> at org.apache.spark.rdd.RDD.partitions(RDD.scala:217)
> at org.apache.spark.SparkContext.runJob(SparkContext.scala:1779)
> at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885)
> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148)
> at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109)
> at org.apache.spark.rdd.RDD.withScope(RDD.scala:286)
> at org.apache.spark.rdd.RDD.collect(RDD.scala:884)
> at org.apache.spark.api.java.JavaRDDLike$class.collect(JavaRDDLike.scala:335)
> at org.apache.spark.api.java.AbstractJavaRDDLike.collect(JavaRDDLike.scala:47)
> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.buildDataModelOnProductid(SparkCategoryRecommender.java:149)
> at com.warrantylife.iqmetrix.spark.SparkCategoryRecommender.computeAndStoreRecommendationsForProductsInCategory(SparkCategoryRecommender.java:179)
> at com.warrantylife.recommendation.impl.CategoryRecommendationManagerImpl.computeRecommendationsForCategory(CategoryRecommendationManagerImpl.java:105)
> at com.warrantylife.testdata.TestDataGeneratorService$1.run(TestDataGeneratorService.java:55)
> at java.lang.Thread.run(Thread.java:745)
>
>
> I guess there is some library conflict happening on the Tomcat, but I have no idea where to look for problem.
>
> This is my whole dependency tree:
>
> [INFO] --- maven-dependency-plugin:2.1:tree (default-cli) @ warranty-analytics ---
> [INFO] org.warrantylife:warranty-analytics:war:0.1.0-SNAPSHOT
> [INFO] +- javax.servlet:javax.servlet-api:jar:3.0.1:provided
> [INFO] +- com.sun.jersey:jersey-client:jar:1.19:compile
> [INFO] +- com.sun.jersey:jersey-server:jar:1.19:compile
> [INFO] +- com.sun.jersey:jersey-core:jar:1.19:compile
> [INFO] | \- javax.ws.rs:jsr311-api:jar:1.1.1:compile
> [INFO] +- com.sun.jersey:jersey-servlet:jar:1.19:compile
> [INFO] +- org.apache.hadoop:hadoop-common:jar:2.4.1:compile
> [INFO] | +- org.apache.hadoop:hadoop-annotations:jar:2.4.1:compile
> [INFO] | | \- jdk.tools:jdk.tools:jar:1.6:system
> [INFO] | +- com.google.guava:guava:jar:11.0.2:compile
> [INFO] | +- commons-cli:commons-cli:jar:1.2:compile
> [INFO] | +- xmlenc:xmlenc:jar:0.52:compile
> [INFO] | +- commons-httpclient:commons-httpclient:jar:3.1:compile
> [INFO] | +- commons-codec:commons-codec:jar:1.4:compile
> [INFO] | +- commons-io:commons-io:jar:2.4:compile
> [INFO] | +- commons-net:commons-net:jar:3.1:compile
> [INFO] | +- commons-collections:commons-collections:jar:3.2.1:compile
> [INFO] | +- javax.servlet:servlet-api:jar:2.5:compile
> [INFO] | +- org.mortbay.jetty:jetty:jar:6.1.26:compile
> [INFO] | +- org.mortbay.jetty:jetty-util:jar:6.1.26:compile
> [INFO] | +- com.sun.jersey:jersey-json:jar:1.9:compile
> [INFO] | +- tomcat:jasper-compiler:jar:5.5.23:runtime
> [INFO] | +- tomcat:jasper-runtime:jar:5.5.23:runtime
> [INFO] | +- javax.servlet.jsp:jsp-api:jar:2.1:runtime
> [INFO] | +- net.java.dev.jets3t:jets3t:jar:0.9.0:compile
> [INFO] | | +- org.apache.httpcomponents:httpcore:jar:4.1.2:compile
> [INFO] | | \- com.jamesmurty.utils:java-xmlbuilder:jar:0.4:compile
> [INFO] | +- commons-lang:commons-lang:jar:2.6:compile
> [INFO] | +- commons-configuration:commons-configuration:jar:1.6:compile
> [INFO] | | +- commons-digester:commons-digester:jar:1.8:compile
> [INFO] | | | \- commons-beanutils:commons-beanutils:jar:1.7.0:compile
> [INFO] | | \- commons-beanutils:commons-beanutils-core:jar:1.8.0:compile
> [INFO] | +- org.codehaus.jackson:jackson-core-asl:jar:1.8.8:compile
> [INFO] | +- org.codehaus.jackson:jackson-mapper-asl:jar:1.8.8:compile
> [INFO] | +- org.apache.avro:avro:jar:1.7.4:compile
> [INFO] | | \- com.thoughtworks.paranamer:paranamer:jar:2.3:compile
> [INFO] | +- com.google.protobuf:protobuf-java:jar:2.5.0:compile
> [INFO] | +- org.apache.hadoop:hadoop-auth:jar:2.4.1:compile
> [INFO] | +- com.jcraft:jsch:jar:0.1.42:compile
> [INFO] | +- com.google.code.findbugs:jsr305:jar:1.3.9:compile
> [INFO] | +- org.apache.zookeeper:zookeeper:jar:3.4.5:compile
> [INFO] | \- org.apache.commons:commons-compress:jar:1.4.1:compile
> [INFO] | \- org.tukaani:xz:jar:1.0:compile
> [INFO] +- org.mongodb.mongo-hadoop:mongo-hadoop-core:jar:1.3.2:compile
> [INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.4.1:compile
> [INFO] | | +- org.apache.hadoop:hadoop-yarn-server-web-proxy:jar:2.4.1:compile
> [INFO] | | +- com.google.inject.extensions:guice-servlet:jar:3.0:compile
> [INFO] | | | \- com.google.inject:guice:jar:3.0:compile
> [INFO] | | | +- javax.inject:javax.inject:jar:1:compile
> [INFO] | | | \- aopalliance:aopalliance:jar:1.0:compile
> [INFO] | | \- io.netty:netty:jar:3.6.2.Final:compile
> [INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.4.1:compile
> [INFO] | | \- org.apache.hadoop:hadoop-yarn-server-nodemanager:jar:2.4.1:compile
> [INFO] | | \- com.sun.jersey.contribs:jersey-guice:jar:1.9:compile
> [INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.4.1:compile
> [INFO] | +- org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.4.1:compile
> [INFO] | | +- org.apache.hadoop:hadoop-yarn-common:jar:2.4.1:compile
> [INFO] | | +- org.apache.hadoop:hadoop-yarn-client:jar:2.4.1:compile
> [INFO] | | \- org.apache.hadoop:hadoop-yarn-server-common:jar:2.4.1:compile
> [INFO] | \- org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.4.1:compile
> [INFO] +- org.codehaus.jackson:jackson-jaxrs:jar:1.9.12:compile
> [INFO] +- org.jboss.resteasy:resteasy-json-p-provider:jar:3.0.9.Final:compile
> [INFO] | +- javax.json:javax.json-api:jar:1.0:compile
> [INFO] | \- org.glassfish:javax.json:jar:1.0.3:compile
> [INFO] +- org.jboss.resteasy:resteasy-jaxrs:jar:3.0.9.Final:compile
> [INFO] | +- org.jboss.spec.javax.annotation:jboss-annotations-api_1.1_spec:jar:1.0.1.Final:compile
> [INFO] | +- javax.activation:activation:jar:1.1:compile
> [INFO] | +- org.apache.httpcomponents:httpclient:jar:4.2.6:compile
> [INFO] | \- net.jcip:jcip-annotations:jar:1.0:compile
> [INFO] +- org.jboss.resteasy:resteasy-jackson-provider:jar:3.0.9.Final:compile
> [INFO] | \- org.codehaus.jackson:jackson-xc:jar:1.9.12:compile
> [INFO] +- org.jboss.resteasy:resteasy-jaxb-provider:jar:3.0.9.Final:compile
> [INFO] | \- com.sun.xml.bind:jaxb-impl:jar:2.2.7:compile
> [INFO] | +- com.sun.xml.bind:jaxb-core:jar:2.2.7:compile
> [INFO] | | +- javax.xml.bind:jaxb-api:jar:2.2.7:compile
> [INFO] | | \- com.sun.istack:istack-commons-runtime:jar:2.16:compile
> [INFO] | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.12:compile
> [INFO] | \- javax.xml.bind:jsr173_api:jar:1.0:compile
> [INFO] +- org.codehaus.jettison:jettison:jar:1.3.2:compile
> [INFO] | \- stax:stax-api:jar:1.0.1:compile
> [INFO] +- org.apache.mahout:mahout-core:jar:0.9:compile
> [INFO] | +- org.apache.mahout:mahout-math:jar:0.9:compile
> [INFO] | +- org.apache.commons:commons-lang3:jar:3.1:compile
> [INFO] | +- com.thoughtworks.xstream:xstream:jar:1.4.4:compile
> [INFO] | | +- xmlpull:xmlpull:jar:1.1.3.1:compile
> [INFO] | | \- xpp3:xpp3_min:jar:1.1.4c:compile
> [INFO] | +- org.apache.lucene:lucene-core:jar:4.6.1:compile
> [INFO] | +- org.apache.mahout.commons:commons-cli:jar:2.0-mahout:compile
> [INFO] | +- org.apache.solr:solr-commons-csv:jar:3.5.0:compile
> [INFO] | \- org.apache.hadoop:hadoop-core:jar:1.2.1:compile
> [INFO] | +- org.apache.commons:commons-math:jar:2.1:compile
> [INFO] | \- commons-el:commons-el:jar:1.0:compile
> [INFO] +- org.apache.mahout:mahout-integration:jar:0.10.0:compile
> [INFO] | +- org.apache.mahout:mahout-hdfs:jar:0.10.0:compile
> [INFO] | +- org.apache.mahout:mahout-mr:jar:0.10.0:compile
> [INFO] | \- org.apache.hbase:hbase-client:jar:1.0.0:compile
> [INFO] | +- org.apache.hbase:hbase-annotations:jar:1.0.0:compile
> [INFO] | +- org.apache.hbase:hbase-common:jar:1.0.0:compile
> [INFO] | +- org.apache.hbase:hbase-protocol:jar:1.0.0:compile
> [INFO] | +- org.apache.htrace:htrace-core:jar:3.1.0-incubating:compile
> [INFO] | +- org.jruby.jcodings:jcodings:jar:1.0.8:compile
> [INFO] | +- org.jruby.joni:joni:jar:2.1.2:compile
> [INFO] | \- com.github.stephenc.findbugs:findbugs-annotations:jar:1.3.9-1:compile
> [INFO] +- org.apache.lucene:lucene-benchmark:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-codecs:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-facet:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-highlighter:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-memory:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-queries:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-queryparser:jar:4.10.0:compile
> [INFO] | +- org.apache.lucene:lucene-spatial:jar:4.10.0:compile
> [INFO] | +- com.ibm.icu:icu4j:jar:53.1:compile
> [INFO] | +- com.spatial4j:spatial4j:jar:0.4.1:compile
> [INFO] | +- net.sourceforge.nekohtml:nekohtml:jar:1.9.17:compile
> [INFO] | \- xerces:xercesImpl:jar:2.9.1:compile
> [INFO] +- org.apache.lucene:lucene-analyzers-common:jar:4.10.0:compile
> [INFO] +- com.carrotsearch.randomizedtesting:randomizedtesting-runner:jar:2.1.6:compile
> [INFO] +- org.easymock:easymock:jar:3.2:compile
> [INFO] | +- cglib:cglib-nodep:jar:2.2.2:compile
> [INFO] | \- org.objenesis:objenesis:jar:1.3:compile
> [INFO] +- mysql:mysql-connector-java:jar:5.1.32:compile
> [INFO] +- org.hibernate:hibernate-core:jar:4.3.6.Final:compile
> [INFO] | +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile
> [INFO] | +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile
> [INFO] | +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile
> [INFO] | +- dom4j:dom4j:jar:1.6.1:compile
> [INFO] | | \- xml-apis:xml-apis:jar:1.0.b2:compile
> [INFO] | +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile
> [INFO] | +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile
> [INFO] | +- org.javassist:javassist:jar:3.18.1-GA:compile
> [INFO] | +- antlr:antlr:jar:2.7.7:compile
> [INFO] | \- org.jboss:jandex:jar:1.1.0.Final:compile
> [INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.6.Final:compile
> [INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile
> [INFO] | \- javax.validation:validation-api:jar:1.0.0.GA:compile
> [INFO] +- org.hibernate:hibernate-ehcache:jar:4.3.2.Final:compile
> [INFO] | \- net.sf.ehcache:ehcache-core:jar:2.4.3:compile
> [INFO] +- junit:junit:jar:4.11:compile
> [INFO] | \- org.hamcrest:hamcrest-core:jar:1.3:compile
> [INFO] +- org.mongodb:mongo-java-driver:jar:3.0.2:compile
> [INFO] +- org.mongodb:bson:jar:3.0.2:compile
> [INFO] +- com.googlecode.json-simple:json-simple:jar:1.1.1:compile
> [INFO] +- org.slf4j:slf4j-api:jar:1.7.7:compile
> [INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.7:compile
> [INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.7:compile
> [INFO] +- commons-logging:commons-logging:jar:1.2:compile
> [INFO] +- org.apache.commons:commons-math3:jar:3.5:compile
> [INFO] +- log4j:log4j:jar:1.2.17:compile
> [INFO] +- com.typesafe:config:jar:1.2.1:compile
> [INFO] +- org.quartz-scheduler:quartz:jar:2.2.1:compile
> [INFO] | \- c3p0:c3p0:jar:0.9.1.1:compile
> [INFO] +- com.novemberain:quartz-mongodb:jar:1.6.0:compile
> [INFO] | \- joda-time:joda-time:jar:2.3:compile
> [INFO] +- com.google.code.gson:gson:jar:2.2.2:compile
> [INFO] \- org.apache.spark:spark-core_2.10:jar:1.4.0:compile
> [INFO] +- com.twitter:chill_2.10:jar:0.5.0:compile
> [INFO] | \- com.esotericsoftware.kryo:kryo:jar:2.21:compile
> [INFO] | +- com.esotericsoftware.reflectasm:reflectasm:jar:shaded:1.07:compile
> [INFO] | \- com.esotericsoftware.minlog:minlog:jar:1.2:compile
> [INFO] +- com.twitter:chill-java:jar:0.5.0:compile
> [INFO] +- org.apache.hadoop:hadoop-client:jar:2.2.0:compile
> [INFO] | +- org.apache.hadoop:hadoop-hdfs:jar:2.2.0:compile
> [INFO] | \- org.apache.hadoop:hadoop-yarn-api:jar:2.2.0:compile
> [INFO] +- org.apache.spark:spark-launcher_2.10:jar:1.4.0:compile
> [INFO] +- org.apache.spark:spark-network-common_2.10:jar:1.4.0:compile
> [INFO] +- org.apache.spark:spark-network-shuffle_2.10:jar:1.4.0:compile
> [INFO] +- org.apache.spark:spark-unsafe_2.10:jar:1.4.0:compile
> [INFO] +- org.apache.curator:curator-recipes:jar:2.4.0:compile
> [INFO] | \- org.apache.curator:curator-framework:jar:2.4.0:compile
> [INFO] | \- org.apache.curator:curator-client:jar:2.4.0:compile
> [INFO] +- org.eclipse.jetty.orbit:javax.servlet:jar:3.0.0.v201112011016:compile
> [INFO] +- org.slf4j:jul-to-slf4j:jar:1.7.10:compile
> [INFO] +- com.ning:compress-lzf:jar:1.0.3:compile
> [INFO] +- org.xerial.snappy:snappy-java:jar:1.1.1.7:compile
> [INFO] +- net.jpountz.lz4:lz4:jar:1.2.0:compile
> [INFO] +- org.roaringbitmap:RoaringBitmap:jar:0.4.5:compile
> [INFO] +- org.spark-project.akka:akka-remote_2.10:jar:2.3.4-spark:compile
> [INFO] | +- org.spark-project.akka:akka-actor_2.10:jar:2.3.4-spark:compile
> [INFO] | +- org.spark-project.protobuf:protobuf-java:jar:2.5.0-spark:compile
> [INFO] | \- org.uncommons.maths:uncommons-maths:jar:1.2.2a:compile
> [INFO] +- org.spark-project.akka:akka-slf4j_2.10:jar:2.3.4-spark:compile
> [INFO] +- org.scala-lang:scala-library:jar:2.10.4:compile
> [INFO] +- org.json4s:json4s-jackson_2.10:jar:3.2.10:compile
> [INFO] | \- org.json4s:json4s-core_2.10:jar:3.2.10:compile
> [INFO] | +- org.json4s:json4s-ast_2.10:jar:3.2.10:compile
> [INFO] | \- org.scala-lang:scalap:jar:2.10.0:compile
> [INFO] | \- org.scala-lang:scala-compiler:jar:2.10.0:compile
> [INFO] +- org.apache.mesos:mesos:jar:shaded-protobuf:0.21.1:compile
> [INFO] +- io.netty:netty-all:jar:4.0.23.Final:compile
> [INFO] +- com.clearspring.analytics:stream:jar:2.7.0:compile
> [INFO] +- io.dropwizard.metrics:metrics-core:jar:3.1.0:compile
> [INFO] +- io.dropwizard.metrics:metrics-jvm:jar:3.1.0:compile
> [INFO] +- io.dropwizard.metrics:metrics-json:jar:3.1.0:compile
> [INFO] +- io.dropwizard.metrics:metrics-graphite:jar:3.1.0:compile
> [INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.4.4:compile
> [INFO] | +- com.fasterxml.jackson.core:jackson-annotations:jar:2.4.0:compile
> [INFO] | \- com.fasterxml.jackson.core:jackson-core:jar:2.4.4:compile
> [INFO] +- com.fasterxml.jackson.module:jackson-module-scala_2.10:jar:2.4.4:compile
> [INFO] | \- org.scala-lang:scala-reflect:jar:2.10.4:compile
> [INFO] +- org.apache.ivy:ivy:jar:2.4.0:compile
> [INFO] +- oro:oro:jar:2.0.8:compile
> [INFO] +- org.tachyonproject:tachyon-client:jar:0.6.4:compile
> [INFO] | \- org.tachyonproject:tachyon:jar:0.6.4:compile
> [INFO] +- net.razorvine:pyrolite:jar:4.4:compile
> [INFO] +- net.sf.py4j:py4j:jar:0.8.2.1:compile
> [INFO] \- org.spark-project.spark:unused:jar:1.0.0:compile
>
> I hope some of you guys will have idea where the problem might be or how to investigate since these logs doesn't tell me too much.
>
>
> Thanks,
> Zoran
>