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Posted to issues@jena.apache.org by GitBox <gi...@apache.org> on 2022/10/25 21:47:34 UTC
[GitHub] [jena] OyvindLGjesdal opened a new issue, #1588: downloading geosparql binary and using with fuseki-webapp results in NoClassDefFoundError:
OyvindLGjesdal opened a new issue, #1588:
URL: https://github.com/apache/jena/issues/1588
### Version
4.6.1
### What happened?
Following the instructions from https://jena.apache.org/documentation/geosparql/geosparql-assembler.html
1. Download fuseki binary and configure
2. Download binary from maven central for jena-geosparql-4.6.1.jar (313.9 KB) and place in $FUSEKI_BASE/extra
3. ./fuseki-server (or starting as a service from ./fuseki-server)
results in stacktrace below
assembler file used is (stedsnavn-geo.ttl, lightly changed copy of assembler in documentation )
```
REFIX fuseki: <http://jena.apache.org/fuseki#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX tdb2: <http://jena.apache.org/2016/tdb#>
PREFIX ja: <http://jena.hpl.hp.com/2005/11/Assembler#>
PREFIX geosparql: <http://jena.apache.org/geosparql#>
<#service> rdf:type fuseki:Service;
fuseki:name "stedsnavn-geo";
fuseki:endpoint [ fuseki:operation fuseki:query; ] ;
fuseki:dataset <#geo_ds> .
<#geo_ds> rdf:type geosparql:GeosparqlDataset ;
geosparql:spatialIndexFile "/var/fuseki/databases/stedsnavn-geo/spatial.index";
geosparql:dataset <#baseDataset> ;
.
<#baseDataset> rdf:type tdb2:DatasetTDB2 ;
tdb2:location "/var/fuseki/databases/stedsnavn-geo/" ;
.
```
When I then view the binary download jar file in an archive app, I only see the the `org/apache` path, should also the dependencies listed in the `jena-geosparql/pom.xml` be present in the jar? (e.g shaded?)
### Relevant output and stacktrace
```shell
Oct 25 22:59:12 fuseki-test.novalocal systemd[1]: Started Fuseki.
Oct 25 22:59:12 fuseki-test.novalocal fuseki-server[2147]: FUSEKI BASE /var/fuseki
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: Exception in thread "main" java.lang.NoClassDefFoundError: org/jdom2/JDOMException
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.geosparql.implementation.datatype.GeometryDatatype.registerDatatypes(GeometryDatatype.java:69)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.geosparql.InitGeoSPARQL.start(InitGeoSPARQL.java:38)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.base.module.Subsystem.lambda$initialize$2(Subsystem.java:117)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at java.base/java.util.ArrayList.forEach(ArrayList.java:1541)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.base.module.Subsystem.forEach(Subsystem.java:193)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.base.module.Subsystem.forEach(Subsystem.java:169)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.base.module.Subsystem.initialize(Subsystem.java:115)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.sys.JenaSystem.init(JenaSystem.java:88)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at arq.cmdline.CmdARQ.<clinit>(CmdARQ.java:30)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at org.apache.jena.fuseki.cmd.FusekiCmd.main(FusekiCmd.java:67)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: Caused by: java.lang.ClassNotFoundException: org.jdom2.JDOMException
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:581)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:522)
Oct 25 22:59:13 fuseki-test.novalocal fuseki-server[2147]: ... 10 more
```
### Are you interested in making a pull request?
Maybe
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[GitHub] [jena] OyvindLGjesdal commented on issue #1588: downloading geosparql binary and using with fuseki-webapp results in NoClassDefFoundError:
Posted by GitBox <gi...@apache.org>.
OyvindLGjesdal commented on issue #1588:
URL: https://github.com/apache/jena/issues/1588#issuecomment-1291188129
doh, I downloaded the wrong jar, the correct one should be https://repo1.maven.org/maven2/org/apache/jena/jena-fuseki-geosparql/4.6.1/jena-fuseki-geosparql-4.6.1.jar and not jena-geosparql-4.6.1.jar.
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[GitHub] [jena] OyvindLGjesdal closed issue #1588: downloading geosparql binary and using with fuseki-webapp results in NoClassDefFoundError:
Posted by GitBox <gi...@apache.org>.
OyvindLGjesdal closed issue #1588: downloading geosparql binary and using with fuseki-webapp results in NoClassDefFoundError:
URL: https://github.com/apache/jena/issues/1588
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