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Posted to commits@ctakes.apache.org by ch...@apache.org on 2012/09/20 22:25:58 UTC
svn commit: r1388196 [10/12] - in /incubator/ctakes/trunk:
ctakes-chunker/desc/ ctakes-chunker/src/main/java/edu/mayo/bmi/uima/adjuster/
ctakes-chunker/src/main/java/edu/mayo/bmi/uima/chunker/
ctakes-chunker/test/data/output/ ctakes-chunker/test/desc/ ...
Modified: incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PreprocessAndWriteXmi.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PreprocessAndWriteXmi.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PreprocessAndWriteXmi.java (original)
+++ incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PreprocessAndWriteXmi.java Thu Sep 20 20:25:49 2012
@@ -57,7 +57,7 @@ import org.xml.sax.ContentHandler;
import org.xml.sax.SAXException;
import edu.mayo.bmi.uima.core.cr.FilesInDirectoryCollectionReader;
-import edu.mayo.bmi.uima.core.type.structured.DocumentID;
+import org.apache.ctakes.typesystem.type.structured.DocumentID;
import edu.mayo.bmi.uima.core.util.DocumentIDAnnotationUtil;
Modified: incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PrintRelationStatistics.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PrintRelationStatistics.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PrintRelationStatistics.java (original)
+++ incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/PrintRelationStatistics.java Thu Sep 20 20:25:49 2012
@@ -37,8 +37,8 @@ import org.uimafit.util.JCasUtil;
import com.google.common.collect.HashMultiset;
import com.google.common.collect.Multiset;
-import edu.mayo.bmi.uima.core.type.relation.BinaryTextRelation;
-import edu.mayo.bmi.uima.core.type.textsem.EntityMention;
+import org.apache.ctakes.typesystem.type.relation.BinaryTextRelation;
+import org.apache.ctakes.typesystem.type.textsem.EntityMention;
public class PrintRelationStatistics {
Modified: incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/RelationExtractorEvaluation.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/RelationExtractorEvaluation.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/RelationExtractorEvaluation.java (original)
+++ incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/eval/RelationExtractorEvaluation.java Thu Sep 20 20:25:49 2012
@@ -67,11 +67,11 @@ import com.google.common.base.Objects;
import com.google.common.base.Objects.ToStringHelper;
import com.google.common.collect.Ordering;
-import edu.mayo.bmi.uima.core.type.relation.BinaryTextRelation;
-import edu.mayo.bmi.uima.core.type.relation.RelationArgument;
-import edu.mayo.bmi.uima.core.type.textsem.EntityMention;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
-import edu.mayo.bmi.uima.core.type.textsem.Modifier;
+import org.apache.ctakes.typesystem.type.relation.BinaryTextRelation;
+import org.apache.ctakes.typesystem.type.relation.RelationArgument;
+import org.apache.ctakes.typesystem.type.textsem.EntityMention;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.textsem.Modifier;
public class RelationExtractorEvaluation extends Evaluation_ImplBase<File, AnnotationStatistics> {
Modified: incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java (original)
+++ incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/chboston/cnlp/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java Thu Sep 20 20:25:49 2012
@@ -27,9 +27,9 @@ import org.apache.uima.jcas.JCas;
import org.uimafit.component.JCasAnnotator_ImplBase;
import org.uimafit.util.JCasUtil;
-import edu.mayo.bmi.uima.core.type.relation.BinaryTextRelation;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.relation.BinaryTextRelation;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
/**
* This is a sample relation annotation consumer.
Modified: incubator/ctakes/trunk/ctakes-relation-extractor/test/src/org/chboston/cnlp/ctakes/relationextractor/ae/NamedEntityFeaturesExtractorTest.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-relation-extractor/test/src/org/chboston/cnlp/ctakes/relationextractor/ae/NamedEntityFeaturesExtractorTest.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-relation-extractor/test/src/org/chboston/cnlp/ctakes/relationextractor/ae/NamedEntityFeaturesExtractorTest.java (original)
+++ incubator/ctakes/trunk/ctakes-relation-extractor/test/src/org/chboston/cnlp/ctakes/relationextractor/ae/NamedEntityFeaturesExtractorTest.java Thu Sep 20 20:25:49 2012
@@ -28,7 +28,7 @@ import org.cleartk.classifier.Feature;
import org.junit.Test;
import org.uimafit.factory.JCasFactory;
-import edu.mayo.bmi.uima.core.type.textsem.EntityMention;
+import org.apache.ctakes.typesystem.type.textsem.EntityMention;
public class NamedEntityFeaturesExtractorTest {
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/AdjP2LookupWindow.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/AdjP2LookupWindow.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/AdjP2LookupWindow.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/AdjP2LookupWindow.xml Thu Sep 20 20:25:49 2012
@@ -55,13 +55,13 @@
<nameValuePair>
<name>srcObjClass</name>
<value>
- <string>edu.mayo.bmi.uima.core.type.syntax.ADJP</string>
+ <string>org.apache.ctakes.typesystem.type.syntax.ADJP</string>
</value>
</nameValuePair>
<nameValuePair>
<name>destObjClass</name>
<value>
- <string>edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</string>
+ <string>org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</string>
</value>
</nameValuePair>
<nameValuePair>
@@ -79,12 +79,12 @@
</imports>
<types>
<typeDescription>
- <name>edu.mayo.bmi.uima.core.type.CopySrcAnnotation</name>
+ <name>org.apache.ctakes.typesystem.type.CopySrcAnnotation</name>
<description>Used for testing CopyAnnotator.</description>
<supertypeName>uima.tcas.Annotation</supertypeName>
</typeDescription>
<typeDescription>
- <name>edu.mayo.bmi.uima.core.type.CopyDestAnnotation</name>
+ <name>org.apache.ctakes.typesystem.type.CopyDestAnnotation</name>
<description>Used for testing CopyAnnotator.</description>
<supertypeName>uima.tcas.Annotation</supertypeName>
</typeDescription>
@@ -95,10 +95,10 @@
<capabilities>
<capability>
<inputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.ADJP</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.ADJP</type>
</inputs>
<outputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</type>
</outputs>
<languagesSupported/>
</capability>
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffect.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffect.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffect.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffect.xml Thu Sep 20 20:25:49 2012
@@ -38,8 +38,8 @@
<capabilities>
<capability>
<inputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</type>
</inputs>
<outputs>
<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.lookup.type.IdentifiedAnnotation</type>
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffectUMLS.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffectUMLS.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffectUMLS.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/DictionaryLookupAnnotator_sideEffectUMLS.xml Thu Sep 20 20:25:49 2012
@@ -109,8 +109,8 @@
<capabilities>
<capability>
<inputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</type>
</inputs>
<outputs>
<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.lookup.type.IdentifiedAnnotation</type>
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/LookupWindowAnnotator_sideEffect.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/LookupWindowAnnotator_sideEffect.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/LookupWindowAnnotator_sideEffect.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/LookupWindowAnnotator_sideEffect.xml Thu Sep 20 20:25:49 2012
@@ -74,7 +74,7 @@
<type allAnnotatorFeatures="true">uima.tt.CNPAnnotation</type>
</inputs>
<outputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</type>
</outputs>
<languagesSupported/>
</capability>
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/VG2LookupWindow.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/VG2LookupWindow.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/VG2LookupWindow.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/analysis_engine/VG2LookupWindow.xml Thu Sep 20 20:25:49 2012
@@ -55,13 +55,13 @@
<nameValuePair>
<name>srcObjClass</name>
<value>
- <string>edu.mayo.bmi.uima.core.type.syntax.VP</string>
+ <string>org.apache.ctakes.typesystem.type.syntax.VP</string>
</value>
</nameValuePair>
<nameValuePair>
<name>destObjClass</name>
<value>
- <string>edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</string>
+ <string>org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</string>
</value>
</nameValuePair>
<nameValuePair>
@@ -79,12 +79,12 @@
</imports>
<types>
<typeDescription>
- <name>edu.mayo.bmi.uima.core.type.CopySrcAnnotation</name>
+ <name>org.apache.ctakes.typesystem.type.CopySrcAnnotation</name>
<description>Used for testing CopyAnnotator.</description>
<supertypeName>uima.tcas.Annotation</supertypeName>
</typeDescription>
<typeDescription>
- <name>edu.mayo.bmi.uima.core.type.CopyDestAnnotation</name>
+ <name>org.apache.ctakes.typesystem.type.CopyDestAnnotation</name>
<description>Used for testing CopyAnnotator.</description>
<supertypeName>uima.tcas.Annotation</supertypeName>
</typeDescription>
@@ -95,10 +95,10 @@
<capabilities>
<capability>
<inputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.VP</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.VP</type>
</inputs>
<outputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation</type>
</outputs>
<languagesSupported/>
</capability>
Modified: incubator/ctakes/trunk/ctakes-side-effect/desc/type_system/SideEffectTypeSystem.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/desc/type_system/SideEffectTypeSystem.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/desc/type_system/SideEffectTypeSystem.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/desc/type_system/SideEffectTypeSystem.xml Thu Sep 20 20:25:49 2012
@@ -35,12 +35,12 @@
<featureDescription>
<name>sideEffect</name>
<description>side effect mention in NamedEntity</description>
- <rangeTypeName>edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation</rangeTypeName>
+ <rangeTypeName>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</rangeTypeName>
</featureDescription>
<featureDescription>
<name>drug</name>
<description/>
- <rangeTypeName>edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation</rangeTypeName>
+ <rangeTypeName>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</rangeTypeName>
</featureDescription>
<featureDescription>
<name>sentence</name>
Modified: incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffect.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffect.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffect.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffect.xml Thu Sep 20 20:25:49 2012
@@ -199,7 +199,7 @@
<properties>
<property key="textMetaFields" value="text"/>
<property key="maxPermutationLevel" value="5"/>
- <property key="windowAnnotations" value="edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation"/>
+ <property key="windowAnnotations" value="org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation"/>
<property key="exclusionTags" value="AUX,AUXD,AUXG,AUXN,AUXP,AUXZ,CC,CD,DT,EX,LS,MD,PDT,POS,PP,PP$,PRP,PRP$,RP,TO,WDT,WP,WPS,WRB"/>
</properties>
</lookupInitializer>
@@ -248,7 +248,7 @@
<properties>
<property key="textMetaFields" value="1"/>
<property key="maxPermutationLevel" value="5"/>
- <property key="windowAnnotations" value="edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation"/>
+ <property key="windowAnnotations" value="org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation"/>
</properties>
</lookupInitializer>
<lookupConsumer className="edu.mayo.bmi.uima.lookup.ae.NamedEntityLookupConsumerImpl">
Modified: incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffectUMLS.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffectUMLS.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffectUMLS.xml (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/resources/sideeffect/lookup/LookupDesc_sideEffectUMLS.xml Thu Sep 20 20:25:49 2012
@@ -199,7 +199,7 @@
<properties>
<property key="textMetaFields" value="text"/>
<property key="maxPermutationLevel" value="5"/>
- <property key="windowAnnotations" value="edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation"/>
+ <property key="windowAnnotations" value="org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation"/>
<property key="exclusionTags" value="AUX,AUXD,AUXG,AUXN,AUXP,AUXZ,CC,CD,DT,EX,LS,MD,PDT,POS,PP,PP$,PRP,PRP$,RP,TO,WDT,WP,WPS,WRB"/>
</properties>
</lookupInitializer>
@@ -249,7 +249,7 @@
<properties>
<property key="textMetaFields" value="1"/>
<property key="maxPermutationLevel" value="5"/>
- <property key="windowAnnotations" value="edu.mayo.bmi.uima.core.type.textspan.LookupWindowAnnotation"/>
+ <property key="windowAnnotations" value="org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation"/>
</properties>
</lookupInitializer>
<lookupConsumer className="edu.mayo.bmi.uima.lookup.ae.NamedEntityLookupConsumerImpl">
Modified: incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/PSESentenceAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/PSESentenceAnnotator.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/PSESentenceAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/PSESentenceAnnotator.java Thu Sep 20 20:25:49 2012
@@ -29,8 +29,8 @@ import org.apache.uima.jcas.JCas;
import org.apache.uima.jcas.JFSIndexRepository;
import org.apache.uima.resource.ResourceInitializationException;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
import edu.mayo.bmi.uima.core.util.FSUtil;
import edu.mayo.bmi.uima.sideeffect.type.PSESentence;
import edu.mayo.bmi.uima.sideeffect.util.SEUtil;
Modified: incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SESentenceFeatureAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SESentenceFeatureAnnotator.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SESentenceFeatureAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SESentenceFeatureAnnotator.java Thu Sep 20 20:25:49 2012
@@ -38,7 +38,7 @@ import org.apache.uima.jcas.JFSIndexRepo
import org.apache.uima.jcas.cas.StringArray;
import org.apache.uima.resource.ResourceInitializationException;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
import edu.mayo.bmi.uima.core.util.DocumentIDAnnotationUtil;
import edu.mayo.bmi.uima.core.util.FSUtil;
import edu.mayo.bmi.uima.sideeffect.type.PSESentence;
Modified: incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SideEffectAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SideEffectAnnotator.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SideEffectAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/ae/SideEffectAnnotator.java Thu Sep 20 20:25:49 2012
@@ -44,8 +44,8 @@ import org.apache.uima.jcas.JFSIndexRepo
import org.apache.uima.resource.ResourceInitializationException;
import edu.mayo.bmi.uima.core.resource.FileResource;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
-import edu.mayo.bmi.uima.core.type.textspan.Segment;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.textspan.Segment;
import edu.mayo.bmi.uima.core.util.DocumentIDAnnotationUtil;
import edu.mayo.bmi.uima.core.util.FSUtil;
import edu.mayo.bmi.uima.drugner.type.SubSectionAnnotation;
Modified: incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/util/SEUtil.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/util/SEUtil.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/util/SEUtil.java (original)
+++ incubator/ctakes/trunk/ctakes-side-effect/src/main/java/edu/mayo/bmi/uima/sideeffect/util/SEUtil.java Thu Sep 20 20:25:49 2012
@@ -30,11 +30,11 @@ import org.apache.uima.jcas.JCas;
import org.apache.uima.jcas.JFSIndexRepository;
import org.apache.uima.jcas.tcas.Annotation;
-import edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation;
-import edu.mayo.bmi.uima.core.type.syntax.NewlineToken;
-import edu.mayo.bmi.uima.core.type.textspan.Segment;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
-import edu.mayo.bmi.uima.core.type.syntax.WordToken;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
+import org.apache.ctakes.typesystem.type.syntax.NewlineToken;
+import org.apache.ctakes.typesystem.type.textspan.Segment;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.syntax.WordToken;
import edu.mayo.bmi.uima.core.util.FSUtil;
/**
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml Thu Sep 20 20:25:49 2012
@@ -61,7 +61,7 @@
<nameValuePair>
<name>destObjClass</name>
<value>
-<string>edu.mayo.bmi.uima.core.type.textspan.Sentence</string>
+<string>org.apache.ctakes.typesystem.type.textspan.Sentence</string>
</value>
</nameValuePair>
<nameValuePair>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml Thu Sep 20 20:25:49 2012
@@ -40,11 +40,11 @@
<capabilities>
<capability>
<inputs>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.Sentence</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.Sentence</type>
</inputs>
<outputs>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.NonSmokerNamedEntityAnnotation</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.NonSmokerNamedEntityAnnotation</type>
</outputs>
<languagesSupported/>
</capability>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml Thu Sep 20 20:25:49 2012
@@ -54,7 +54,7 @@
<capabilities>
<capability>
<inputs>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
</inputs>
<outputs>
<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.libsvm.types.StringAttributeValue</type>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/Sentence.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/Sentence.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/Sentence.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/Sentence.xml Thu Sep 20 20:25:49 2012
@@ -26,7 +26,7 @@
<vendor></vendor>
<types>
<typeDescription>
-<name>edu.mayo.bmi.uima.core.type.textspan.Sentence</name>
+<name>org.apache.ctakes.typesystem.type.textspan.Sentence</name>
<description></description>
<supertypeName>uima.tcas.Annotation</supertypeName>
<features>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SentenceDetectorAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SentenceDetectorAnnotator.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SentenceDetectorAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SentenceDetectorAnnotator.xml Thu Sep 20 20:25:49 2012
@@ -50,10 +50,10 @@
<capabilities>
<capability>
<inputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
</inputs>
<outputs>
- <type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.Sentence</type>
+ <type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.Sentence</type>
</outputs>
<languagesSupported/>
</capability>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml Thu Sep 20 20:25:49 2012
@@ -38,8 +38,8 @@
<capabilities>
<capability>
<inputs>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.syntax.BaseToken</type>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.core.type.textspan.Sentence</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
+<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.Sentence</type>
</inputs>
<outputs>
<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.lookup.type.NamedEntity</type>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/desc/type_system/SmokingProductionTypeSystem.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/desc/type_system/SmokingProductionTypeSystem.xml?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/desc/type_system/SmokingProductionTypeSystem.xml (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/desc/type_system/SmokingProductionTypeSystem.xml Thu Sep 20 20:25:49 2012
@@ -60,12 +60,12 @@
<typeDescription>
<name>edu.mayo.bmi.uima.SmokingStatus.type.SmokerNamedEntityAnnotation</name>
<description/>
- <supertypeName>edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation</supertypeName>
+ <supertypeName>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</supertypeName>
</typeDescription>
<typeDescription>
<name>edu.mayo.bmi.uima.SmokingStatus.type.NonSmokerNamedEntityAnnotation</name>
<description/>
- <supertypeName>edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation</supertypeName>
+ <supertypeName>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</supertypeName>
</typeDescription>
<typeDescription>
<name>edu.mayo.bmi.smoking.type.SmokingDocumentClassification</name>
@@ -87,7 +87,7 @@
<typeDescription>
<name>edu.mayo.bmi.uima.SmokingStatus.type.UnknownSmokerNamedEntityAnnotation</name>
<description/>
- <supertypeName>edu.mayo.bmi.uima.core.type.textsem.IdentifiedAnnotation</supertypeName>
+ <supertypeName>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</supertypeName>
</typeDescription>
</types>
</typeSystemDescription>
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ClassifiableEntries.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ClassifiableEntries.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ClassifiableEntries.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ClassifiableEntries.java Thu Sep 20 20:25:49 2012
@@ -60,9 +60,9 @@ import edu.mayo.bmi.smoking.type.Smoking
import edu.mayo.bmi.smoking.util.ClassifiableEntry;
import edu.mayo.bmi.smoking.util.TruthValue;
import edu.mayo.bmi.uima.core.resource.FileResource;
-import edu.mayo.bmi.uima.core.type.structured.DocumentID;
-import edu.mayo.bmi.uima.core.type.textspan.Segment;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.structured.DocumentID;
+import org.apache.ctakes.typesystem.type.textspan.Segment;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
import edu.mayo.bmi.uima.libsvm.type.NominalAttributeValue;
/**
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/KuRuleBasedClassifierAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/KuRuleBasedClassifierAnnotator.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/KuRuleBasedClassifierAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/KuRuleBasedClassifierAnnotator.java Thu Sep 20 20:25:49 2012
@@ -34,7 +34,7 @@ import org.apache.uima.resource.Resource
import edu.mayo.bmi.smoking.Const;
import edu.mayo.bmi.uima.SmokingStatus.type.UnknownSmokerNamedEntityAnnotation;
import edu.mayo.bmi.uima.core.resource.FileLocator;
-import edu.mayo.bmi.uima.core.type.syntax.WordToken;
+import org.apache.ctakes.typesystem.type.syntax.WordToken;
import edu.mayo.bmi.uima.libsvm.type.NominalAttributeValue;
public class KuRuleBasedClassifierAnnotator extends JCasAnnotator_ImplBase {
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/PcsClassifierAnnotator_libsvm.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/PcsClassifierAnnotator_libsvm.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/PcsClassifierAnnotator_libsvm.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/PcsClassifierAnnotator_libsvm.java Thu Sep 20 20:25:49 2012
@@ -41,7 +41,7 @@ import org.apache.uima.resource.Resource
import edu.mayo.bmi.smoking.Const;
import edu.mayo.bmi.uima.core.resource.FileResource;
-import edu.mayo.bmi.uima.core.type.syntax.WordToken;
+import org.apache.ctakes.typesystem.type.syntax.WordToken;
import edu.mayo.bmi.uima.libsvm.type.NominalAttributeValue;
public class PcsClassifierAnnotator_libsvm extends JCasAnnotator_ImplBase {
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ResolutionAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ResolutionAnnotator.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ResolutionAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/ResolutionAnnotator.java Thu Sep 20 20:25:49 2012
@@ -40,8 +40,8 @@ import edu.mayo.bmi.smoking.Const;
import edu.mayo.bmi.uima.SmokingStatus.type.NonSmokerNamedEntityAnnotation;
import edu.mayo.bmi.uima.SmokingStatus.type.SmokerNamedEntityAnnotation;
import edu.mayo.bmi.uima.core.resource.FileResource;
-import edu.mayo.bmi.uima.core.type.syntax.WordToken;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.syntax.WordToken;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
import edu.mayo.bmi.uima.libsvm.type.NominalAttributeValue;
/**
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/SentenceAdjuster.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/SentenceAdjuster.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/SentenceAdjuster.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/ae/SentenceAdjuster.java Thu Sep 20 20:25:49 2012
@@ -33,8 +33,8 @@ import org.apache.uima.jcas.JFSIndexRepo
import org.apache.uima.jcas.JCas;
import org.apache.uima.resource.ResourceInitializationException;
-import edu.mayo.bmi.uima.core.type.textspan.Segment;
-import edu.mayo.bmi.uima.core.type.textspan.Sentence;
+import org.apache.ctakes.typesystem.type.textspan.Segment;
+import org.apache.ctakes.typesystem.type.textspan.Sentence;
/**
* UIMA annotator that uses some patterns and some rules about those patterns to
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/cc/RecordResolutionCasConsumer.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/cc/RecordResolutionCasConsumer.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/cc/RecordResolutionCasConsumer.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/smoking/cc/RecordResolutionCasConsumer.java Thu Sep 20 20:25:49 2012
@@ -36,7 +36,7 @@ import org.apache.uima.util.ProcessTrace
import edu.mayo.bmi.smoking.patientLevel.PatientLevelSmokingStatus;
import edu.mayo.bmi.smoking.type.SmokingDocumentClassification;
-import edu.mayo.bmi.uima.core.type.structured.DocumentID;
+import org.apache.ctakes.typesystem.type.structured.DocumentID;
public class RecordResolutionCasConsumer extends CasConsumer_ImplBase
{
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java Thu Sep 20 20:25:49 2012
@@ -30,8 +30,8 @@ import org.apache.uima.jcas.JCas;
import edu.mayo.bmi.dictionary.MetaDataHit;
import edu.mayo.bmi.lookup.vo.LookupHit;
import edu.mayo.bmi.uima.SmokingStatus.type.NonSmokerNamedEntityAnnotation;
-import edu.mayo.bmi.uima.core.type.refsem.OntologyConcept;
-import edu.mayo.bmi.uima.core.type.constants.CONST;
+import org.apache.ctakes.typesystem.type.refsem.OntologyConcept;
+import org.apache.ctakes.typesystem.type.constants.CONST;
import edu.mayo.bmi.uima.lookup.ae.BaseLookupConsumerImpl;
import edu.mayo.bmi.uima.lookup.ae.LookupConsumer;
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java Thu Sep 20 20:25:49 2012
@@ -30,8 +30,8 @@ import org.apache.uima.jcas.cas.FSArray;
import edu.mayo.bmi.dictionary.MetaDataHit;
import edu.mayo.bmi.lookup.vo.LookupHit;
import edu.mayo.bmi.uima.SmokingStatus.type.SmokerNamedEntityAnnotation;
-import edu.mayo.bmi.uima.core.type.refsem.OntologyConcept;
-import edu.mayo.bmi.uima.core.type.constants.CONST;
+import org.apache.ctakes.typesystem.type.refsem.OntologyConcept;
+import org.apache.ctakes.typesystem.type.constants.CONST;
/**
* copied from edu.may.bmi.uima.lookup.ae.NamedEntityLookupConsumerImpl in the "Dictionary Lookup" project
Modified: incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java?rev=1388196&r1=1388195&r2=1388196&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-smoking-status/src/main/java/edu/mayo/bmi/uima/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java Thu Sep 20 20:25:49 2012
@@ -30,8 +30,8 @@ import org.apache.uima.jcas.cas.FSArray;
import edu.mayo.bmi.dictionary.MetaDataHit;
import edu.mayo.bmi.lookup.vo.LookupHit;
import edu.mayo.bmi.uima.SmokingStatus.type.UnknownSmokerNamedEntityAnnotation;
-import edu.mayo.bmi.uima.core.type.refsem.OntologyConcept;
-import edu.mayo.bmi.uima.core.type.constants.CONST;
+import org.apache.ctakes.typesystem.type.refsem.OntologyConcept;
+import org.apache.ctakes.typesystem.type.constants.CONST;
/**
* copied from edu.may.bmi.uima.lookup.ae.NamedEntityLookupConsumerImpl in the "Dictionary Lookup" project