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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2019/12/12 02:43:52 UTC
Build failed in Jenkins: beam_PostCommit_Python_MongoDBIO_IT #1524
See <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/1524/display/redirect?page=changes>
Changes:
[ehudm] [BEAM-3713] pytest migration: py27-cython-pytest
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Successfully installed configparser-4.0.2 contextlib2-0.6.0.post1 enum34-1.1.6 filelock-3.0.12 future-0.16.0 futures-3.3.0 grpcio-1.25.0 grpcio-tools-1.14.2 importlib-metadata-1.3.0 more-itertools-5.0.0 mypy-protobuf-1.12 pathlib2-2.3.5 pluggy-0.13.1 protobuf-3.11.1 py-1.8.0 scandir-1.10.0 six-1.13.0 toml-0.10.0 tox-3.11.1 virtualenv-16.7.8 zipp-0.6.0
> Task :sdks:python:test-suites:direct:py35:setupVirtualenv
Using base prefix '/usr'
New python executable in <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/build/gradleenv/1398941889/bin/python3.5>
Also creating executable in <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/build/gradleenv/1398941889/bin/python>
Installing setuptools, pip, wheel...
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> Task :sdks:python:test-suites:direct:py2:mongodbioIT
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> Task :sdks:python:test-suites:direct:py35:mongodbioIT FAILED
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> Task :sdks:python:test-suites:direct:py2:mongodbioIT
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DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
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Requirement already satisfied: contextlib2; python_version < "3" in <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/build/gradleenv/45127155/lib/python2.7/site-packages> (from importlib-metadata>=0.12; python_version < "3.8"->pytest<5.0,>=4.4.0->apache-beam==2.19.0.dev0) (0.6.0.post1)
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Requirement already satisfied: configparser>=3.5; python_version < "3" in <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/build/gradleenv/45127155/lib/python2.7/site-packages> (from importlib-metadata>=0.12; python_version < "3.8"->pytest<5.0,>=4.4.0->apache-beam==2.19.0.dev0) (4.0.2)
Requirement already satisfied: scandir; python_version < "3.5" in <https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/build/gradleenv/45127155/lib/python2.7/site-packages> (from pathlib2>=2.2.0; python_version < "3.6"->pytest<5.0,>=4.4.0->apache-beam==2.19.0.dev0) (1.10.0)
Collecting apipkg>=1.4
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Installing collected packages: crcmod, dill, fastavro, docopt, urllib3, certifi, chardet, idna, requests, hdfs, httplib2, pbr, funcsigs, mock, numpy, pymongo, pyasn1, pyasn1-modules, rsa, oauth2client, pyparsing, pydot, python-dateutil, pytz, avro, pyvcf, pyarrow, typing, typing-extensions, nose, nose-xunitmp, pandas, parameterized, pyhamcrest, pyyaml, requests-mock, monotonic, tenacity, atomicwrites, packaging, wcwidth, attrs, pytest, pytest-forked, apipkg, execnet, pytest-xdist, apache-beam
Running setup.py develop for apache-beam
Successfully installed apache-beam apipkg-1.5 atomicwrites-1.3.0 attrs-19.3.0 avro-1.9.1 certifi-2019.11.28 chardet-3.0.4 crcmod-1.7 dill-0.3.1.1 docopt-0.6.2 execnet-1.7.1 fastavro-0.21.24 funcsigs-1.0.2 hdfs-2.5.8 httplib2-0.12.0 idna-2.8 mock-2.0.0 monotonic-1.5 nose-1.3.7 nose-xunitmp-0.4.1 numpy-1.16.5 oauth2client-3.0.0 packaging-19.2 pandas-0.24.2 parameterized-0.6.3 pbr-5.4.4 pyarrow-0.15.1 pyasn1-0.4.8 pyasn1-modules-0.2.7 pydot-1.4.1 pyhamcrest-1.9.0 pymongo-3.10.0 pyparsing-2.4.5 pytest-4.6.7 pytest-forked-1.1.3 pytest-xdist-1.30.0 python-dateutil-2.8.1 pytz-2019.3 pyvcf-0.6.8 pyyaml-5.2 requests-2.22.0 requests-mock-1.7.0 rsa-4.0 tenacity-5.1.5 typing-3.7.4.1 typing-extensions-3.7.4.1 urllib3-1.25.7 wcwidth-0.1.7
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/__init__.py>:84: UserWarning: You are using Apache Beam with Python 2. New releases of Apache Beam will soon support Python 3 only.
'You are using Apache Beam with Python 2. '
INFO:root:Missing pipeline option (runner). Executing pipeline using the default runner: DirectRunner.
INFO:__main__:Writing 100000 documents to mongodb
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:70: FutureWarning: WriteToMongoDB is experimental.
known_args.batch_size)
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function annotate_downstream_side_inputs at 0x7faf2d19b0c8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function fix_side_input_pcoll_coders at 0x7faf2d19b1b8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function lift_combiners at 0x7faf2d19b230> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_sdf at 0x7faf2d19b2a8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_gbk at 0x7faf2d19b320> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sink_flattens at 0x7faf2d19b410> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function greedily_fuse at 0x7faf2d19b488> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function read_to_impulse at 0x7faf2d19b500> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function impulse_to_input at 0x7faf2d19b578> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function inject_timer_pcollections at 0x7faf2d19b6e0> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sort_stages at 0x7faf2d19b758> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function window_pcollection_coders at 0x7faf2d19b7d0> ====================
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 100
INFO:apache_beam.runners.portability.fn_api_runner:Created Worker handler <apache_beam.runners.portability.fn_api_runner.EmbeddedWorkerHandler object at 0x7faf2fad1550> for environment urn: "beam:env:embedded_python:v1"
INFO:apache_beam.runners.portability.fn_api_runner:Running (ref_AppliedPTransform_Create documents/Impulse_3)+((ref_AppliedPTransform_Create documents/FlatMap(<lambda at core.py:2573>)_4)+((ref_AppliedPTransform_Create documents/MaybeReshuffle/Reshuffle/AddRandomKeys_7)+((ref_AppliedPTransform_Create documents/MaybeReshuffle/Reshuffle/ReshufflePerKey/Map(reify_timestamps)_9)+(Create documents/MaybeReshuffle/Reshuffle/ReshufflePerKey/GroupByKey/Write))))
INFO:apache_beam.runners.portability.fn_api_runner:Running (((Create documents/MaybeReshuffle/Reshuffle/ReshufflePerKey/GroupByKey/Read)+(ref_AppliedPTransform_Create documents/MaybeReshuffle/Reshuffle/ReshufflePerKey/FlatMap(restore_timestamps)_14))+((ref_AppliedPTransform_Create documents/MaybeReshuffle/Reshuffle/RemoveRandomKeys_15)+(ref_AppliedPTransform_Create documents/Map(decode)_16)))+((ref_AppliedPTransform_WriteToMongoDB/ParDo(_GenerateObjectIdFn)_18)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/AddRandomKeys_20)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/Map(reify_timestamps)_22)+(WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Write))))
INFO:apache_beam.runners.portability.fn_api_runner:Running (WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Read)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/FlatMap(restore_timestamps)_27)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/RemoveRandomKeys_28)+(ref_AppliedPTransform_WriteToMongoDB/ParDo(_WriteMongoFn)_29)))
INFO:__main__:Writing 100000 documents to mongodb finished in 70.309 seconds
INFO:root:Missing pipeline option (runner). Executing pipeline using the default runner: DirectRunner.
INFO:__main__:Reading from mongodb beam_mongodbio_it_db:integration_test_1576118536
<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:85: FutureWarning: ReadFromMongoDB is experimental.
| 'Map' >> beam.Map(lambda doc: doc['number'])
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function annotate_downstream_side_inputs at 0x7faf2d19b0c8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function fix_side_input_pcoll_coders at 0x7faf2d19b1b8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function lift_combiners at 0x7faf2d19b230> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_sdf at 0x7faf2d19b2a8> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function expand_gbk at 0x7faf2d19b320> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sink_flattens at 0x7faf2d19b410> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function greedily_fuse at 0x7faf2d19b488> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function read_to_impulse at 0x7faf2d19b500> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function impulse_to_input at 0x7faf2d19b578> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function inject_timer_pcollections at 0x7faf2d19b6e0> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function sort_stages at 0x7faf2d19b758> ====================
INFO:apache_beam.runners.portability.fn_api_runner_transforms:==================== <function window_pcollection_coders at 0x7faf2d19b7d0> ====================
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 100
INFO:apache_beam.runners.portability.fn_api_runner:Created Worker handler <apache_beam.runners.portability.fn_api_runner.EmbeddedWorkerHandler object at 0x7faf233e39d0> for environment urn: "beam:env:embedded_python:v1"
INFO:apache_beam.runners.portability.fn_api_runner:Running ((ref_AppliedPTransform_ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/Impulse_5)+(ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/PairWithRestriction))+((ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/SplitAndSizeRestriction)+(ref_PCollection_PCollection_1_split/Write))
INFO:apache_beam.runners.portability.fn_api_runner:Running ((ref_AppliedPTransform_assert_that/Create/Impulse_10)+((ref_AppliedPTransform_assert_that/Create/FlatMap(<lambda at core.py:2573>)_11)+((ref_AppliedPTransform_assert_that/Create/Map(decode)_13)+(ref_AppliedPTransform_assert_that/Group/pair_with_0_17))))+((assert_that/Group/Flatten/Transcode/0)+(assert_that/Group/Flatten/Write/0))
INFO:apache_beam.runners.portability.fn_api_runner:Running (((ref_PCollection_PCollection_1_split/Read)+((ReadFromMongoDB/Read/_SDFBoundedSourceWrapper/ParDo(SDFBoundedSourceDoFn)/Process)+((ref_AppliedPTransform_Map_7)+((ref_AppliedPTransform_assert_that/WindowInto(WindowIntoFn)_14)+(ref_AppliedPTransform_assert_that/ToVoidKey_15)))))+(ref_AppliedPTransform_assert_that/Group/pair_with_1_18))+((assert_that/Group/Flatten/Transcode/1)+(assert_that/Group/Flatten/Write/1))
INFO:apache_beam.runners.portability.fn_api_runner:Running (assert_that/Group/Flatten/Read)+(assert_that/Group/GroupByKey/Write)
INFO:apache_beam.runners.portability.fn_api_runner:Running (assert_that/Group/GroupByKey/Read)+((ref_AppliedPTransform_assert_that/Group/Map(_merge_tagged_vals_under_key)_24)+((ref_AppliedPTransform_assert_that/Unkey_25)+(ref_AppliedPTransform_assert_that/Match_26)))
INFO:__main__:Read 100000 documents from mongodb finished in 22.522 seconds
mongoioit27869
mongoioit27869
FAILURE: Build failed with an exception.
* Where:
Build file '<https://builds.apache.org/job/beam_PostCommit_Python_MongoDBIO_IT/ws/src/sdks/python/test-suites/direct/py35/build.gradle'> line: 71
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py35:mongodbioIT'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 2m 32s
4 actionable tasks: 4 executed
Publishing build scan...
https://scans.gradle.com/s/jvv5sheulatgg
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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