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- [jira] [Commented] (CTAKES-556) Build fails with Blocked mirror for repositories - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 15:49:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-556) Build fails with Blocked mirror for repositories - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 15:50:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-405) Installation not possible - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 16:13:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-415) DateAnnotatorTest testParseDate(org.apache.ctakes.ytex.uima.annotators.DateAnnotatorTest) - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 16:22:00 UTC, 0 replies.
- [jira] [Assigned] (CTAKES-476) Nullpointer running EA with AssertionAnotator (ctakes-assertion/desc/AssertionMiniPipelineAnalysisEngine.xml) - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 16:25:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-476) Nullpointer running EA with AssertionAnotator (ctakes-assertion/desc/AssertionMiniPipelineAnalysisEngine.xml) - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 16:31:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-548) Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 16:37:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-449) PolarityCleartkAnalysisEngine slow for large documents - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 17:31:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-446) Piper file parameter value ignored when it contains quoted equals - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 17:48:00 UTC, 0 replies.
- [jira] [Resolved] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 18:10:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-72) Housekeeping - clean up eclipse launch files - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/20 18:28:00 UTC, 0 replies.
- [jira] [Resolved] (CTAKES-72) Housekeeping - clean up eclipse launch files - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 18:29:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-71) Housekeeping - remove multiple copies of resources in different cTAKES projects - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 18:39:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-106) Add component to store XMI as Lucene indexes - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 18:44:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-555) Unable to run negation pipeline - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 18:58:00 UTC, 1 replies.
- [jira] [Commented] (CTAKES-558) StrengthAnnotation,DrugchangeStatus Annotation,StrengthAnnotation,FractionStrengthAnnotation,FrequencyUnitAnnotation not coming in the ctakes-web-rest web app - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:06:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-542) Error : Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:13:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-557) remove log4jv1 dependency - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:15:00 UTC, 6 replies.
- [jira] [Commented] (CTAKES-551) cTAKES Download link is not working - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:24:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-544) Smoking Status Annotator Question - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:32:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-536) test program info - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:34:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-536) test program info - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:35:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-534) Error while creating custom dictionary - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:39:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-533) Cannot create custom words with "." in the custom BSV file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 19:41:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-385) URI is not hierarchical when attempting to obtain lvg.properties within JAR - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:08:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-532) ctakes-assertion throws NullPointerException - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:15:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-531) String.replaceAll() has bad performance against replace() if not regex. - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/20 20:39:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-532) ctakes-assertion throws NullPointerException - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/20 20:39:00 UTC, 0 replies.
- [jira] [Resolved] (CTAKES-531) String.replaceAll() has bad performance against replace() if not regex. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:40:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-519) Polarity not working with Piper files - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:45:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-528) annotation confidence is always 0 - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:48:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-471) i cant load the Apache Ctakes AggregatePlaintextFastUMLSProcessor.xml file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:52:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-474) CTakes help getting sign /symptoms - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:54:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-512) Initialization of Annotator Class Failed - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:55:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-515) Failing to compile runPiperGui profile in Intellij - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 20:57:00 UTC, 0 replies.
- [jira] [Resolved] (CTAKES-525) Can't create custom dictionaries for resources with a dash in their names - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:01:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-521) Please specify PARAM_IS_TRAINING - unable to infer it from context - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:02:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-514) Running cTakes on Eclipse - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:04:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-517) Running command line interface for development version throws error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:14:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-517) Running command line interface for development version throws error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:14:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-509) Build Error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:28:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-492) New cTAKES user question - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:45:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-352) Performance Report - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:55:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-352) Performance Report - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 21:55:00 UTC, 0 replies.
- [jira] [Resolved] (CTAKES-246) DrugMentionAnnotator falls to infinite loop for some expression - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/20 22:03:00 UTC, 0 replies.
- [jira] [Created] (CTAKES-560) Upgrade to UIMA v3 and ClearTK v3 - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/21 10:18:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-433) Update to Java 11 - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/21 10:23:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-433) Update to Java 11 - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/21 10:24:00 UTC, 1 replies.
- [jira] [Commented] (CTAKES-161) Take advantage of Java 1.5+ functionality - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/21 10:26:00 UTC, 1 replies.
- [jira] [Commented] (CTAKES-16) use uimaFIT's selectCovered() instead of UIMA's subiterator - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/21 10:27:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-161) Take advantage of Java 1.5+ functionality - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/23 17:21:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-233) DictionaryLookup can't identify "CIN I". - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:17:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-50) Remove UIMA Deprecated references in Annotators - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:34:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-64) add Scrubber De-Identification module to sandbox - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:40:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-64) add Scrubber De-Identification module to sandbox - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:41:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-192) GSoC: Implement cTAKES Installer - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:45:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-192) GSoC: Implement cTAKES Installer - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:46:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-67) LuceneDictionaryImpl and iv_maxHits - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:50:00 UTC, 2 replies.
- [jira] [Commented] (CTAKES-67) LuceneDictionaryImpl and iv_maxHits - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:54:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-158) DateAnnotation bug when two dates directly adjacent - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 18:57:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-112) UIMA CVD: java.lang.OutOfMemoryError: Java heap space when using the AggregatePlaintextUMLSProcessor.xml - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:00:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-112) UIMA CVD: java.lang.OutOfMemoryError: Java heap space when using the AggregatePlaintextUMLSProcessor.xml - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:01:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-37) Add AE from ARC - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:37:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-26) concept unique identifiers(CUI) from lvg dictionary - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:39:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-23) Auto detect which annotator to use based on notes - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:41:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-509) Build Error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:43:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-544) Smoking Status Annotator Question - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:45:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-450) CDASegmentAnnotator misses all headings after empty segment - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 19:48:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-503) DBConsumer does not handle bodyLocation attributes - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/28 19:59:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-503) DBConsumer does not handle bodyLocation attributes - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 20:00:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-483) Migrate Ant build scripts to Maven - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 20:15:00 UTC, 3 replies.
- [jira] [Comment Edited] (CTAKES-483) Migrate Ant build scripts to Maven - posted by "Richard Eckart de Castilho (Jira)" <ji...@apache.org> on 2022/12/28 20:20:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-482) Developer environment Git+Subversion - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 20:22:00 UTC, 0 replies.
- [jira] [Created] (CTAKES-561) ctakes-ytex and ctakes-ytex-uima each creates a complete lib/ copy of ctakes - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/28 22:32:00 UTC, 0 replies.
- [jira] [Created] (CTAKES-562) Too many XML libraries - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 15:27:00 UTC, 0 replies.
- [jira] [Created] (CTAKES-563) Get rid of google convenience calls. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 15:45:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-562) Too many XML libraries - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 15:46:00 UTC, 1 replies.
- [jira] [Created] (CTAKES-564) Upgrade ctakes-smoking-status to uimafit - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 16:01:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-564) Upgrade ctakes-smoking-status to uimafit - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/29 18:06:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-564) Upgrade ctakes-smoking-status to uimafit - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 18:08:00 UTC, 0 replies.
- [jira] [Comment Edited] (CTAKES-542) Error : Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/29 18:15:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-533) Cannot create custom words with "." in the custom BSV file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:10:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-539) cTakes 4.0 installation error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:27:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-539) cTakes 4.0 installation error - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:29:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-538) DBCollectionReader throwing an exception while running a piper file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:33:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-538) DBCollectionReader throwing an exception while running a piper file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:34:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-490) cTAKES 4.0.1-SNAPSHOT - Problem with CVD and AggregatePlaintextFastUMLSProcessor - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:43:00 UTC, 1 replies.
- [jira] [Closed] (CTAKES-490) cTAKES 4.0.1-SNAPSHOT - Problem with CVD and AggregatePlaintextFastUMLSProcessor - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:44:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-453) Unable to run CVD locally - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:52:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-453) Unable to run CVD locally - posted by "ASF subversion and git services (Jira)" <ji...@apache.org> on 2022/12/30 22:56:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-158) DateAnnotation bug when two dates directly adjacent - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:58:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-557) remove log4jv1 dependency - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 22:59:00 UTC, 1 replies.
- [jira] [Closed] (CTAKES-555) Unable to run negation pipeline - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:01:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-484) Unused or out-of-project references - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:10:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-484) Unused or out-of-project references - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:11:00 UTC, 1 replies.
- [jira] [Closed] (CTAKES-484) Unused or out-of-project references - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:12:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-478) Subject detection doesn't work if we use Posessive 's - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:13:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-477) Negative adjetives doesn't work for all the preposition indicated on the documentation - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:14:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-475) Negation particles are not detected as negation. - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:15:00 UTC, 0 replies.
- [jira] [Commented] (CTAKES-452) ctakes-template-filler (RelationExtractorAggregateWithoutOrangeBook.xml) refers to a non-existing file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:19:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-452) ctakes-template-filler (RelationExtractorAggregateWithoutOrangeBook.xml) refers to a non-existing file - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:20:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-434) Add /Edit @PipeBitInfo Annotations to cr, ae and cc classes - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:21:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-328) Clean up XML Annotator Descriptors - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:27:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:30:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-231) missing NEs because of inconsistent chunking for parallel sentence constructions - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:32:00 UTC, 0 replies.
- [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:33:00 UTC, 1 replies.
- [jira] [Commented] (CTAKES-422) Correct username and password but getting error Unknown host exception: uts-ws.nlm.nih.gov - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:35:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-422) Correct username and password but getting error Unknown host exception: uts-ws.nlm.nih.gov - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:35:00 UTC, 0 replies.
- [jira] [Closed] (CTAKES-408) Loading the AE using UMLS credentendials - posted by "Sean Finan (Jira)" <ji...@apache.org> on 2022/12/30 23:37:00 UTC, 0 replies.